Reader.java 37.4 KB
1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 62 63 64 65 66 67 68 69 70 71 72 73 74 75 76 77 78 79 80 81 82 83 84 85 86 87 88 89 90 91 92 93 94 95 96 97 98 99 100 101 102 103 104 105 106 107 108 109 110 111 112 113 114 115 116 117 118 119 120 121 122 123 124 125 126 127 128 129 130 131 132 133 134 135 136 137 138 139 140 141 142 143 144 145 146 147 148 149 150 151 152 153 154 155 156 157 158 159 160 161 162 163 164 165 166 167 168 169 170 171 172 173 174 175 176 177 178 179 180 181 182 183 184 185 186 187 188 189 190 191 192 193 194 195 196 197 198 199 200 201 202 203 204 205 206 207 208 209 210 211 212 213 214 215 216 217 218 219 220 221 222 223 224 225 226 227 228 229 230 231 232 233 234 235 236 237 238 239 240 241 242 243 244 245 246 247 248 249 250 251 252 253 254 255 256 257 258 259 260 261 262 263 264 265 266 267 268 269 270 271 272 273 274 275 276 277 278 279 280 281 282 283 284 285 286 287 288 289 290 291 292 293 294 295 296 297 298 299 300 301 302 303 304 305 306 307 308 309 310 311 312 313 314 315 316 317 318 319 320 321 322 323 324 325 326 327 328 329 330 331 332 333 334 335 336 337 338 339 340 341 342 343 344 345 346 347 348 349 350 351 352 353 354 355 356 357 358 359 360 361 362 363 364 365 366 367 368 369 370 371 372 373 374 375 376 377 378 379 380 381 382 383 384 385 386 387 388 389 390 391 392 393 394 395 396 397 398 399 400 401 402 403 404 405 406 407 408 409 410 411 412 413 414 415 416 417 418 419 420 421 422 423 424 425 426 427 428 429 430 431 432 433 434 435 436 437 438 439 440 441 442 443 444 445 446 447 448 449 450 451 452 453 454 455 456 457 458 459 460 461 462 463 464 465 466 467 468 469 470 471 472 473 474 475 476 477 478 479 480 481 482 483 484 485 486 487 488 489 490 491 492 493 494 495 496 497 498 499 500 501 502 503 504 505 506 507 508 509 510 511 512 513 514 515 516 517 518 519 520 521 522 523 524 525 526 527 528 529 530 531 532 533 534 535 536 537 538 539 540 541 542 543 544 545 546 547 548 549 550 551 552 553 554 555 556 557 558 559 560 561 562 563 564 565 566 567 568 569 570 571 572 573 574 575 576 577 578 579 580 581 582 583 584 585 586 587 588 589 590 591 592 593 594 595 596 597 598 599 600 601 602 603 604 605 606 607 608 609 610 611 612 613 614 615 616 617 618 619 620 621 622 623 624 625 626 627 628 629 630 631 632 633 634 635 636 637 638 639 640 641 642 643 644 645 646 647 648 649 650 651 652 653 654 655 656 657 658 659 660 661 662 663 664 665 666 667 668 669 670 671 672 673 674 675 676 677 678 679 680 681 682 683 684 685 686 687 688 689 690 691 692 693 694 695 696 697 698 699 700 701 702 703 704 705 706 707 708 709 710 711 712 713 714 715 716 717 718 719 720 721 722 723 724 725 726 727 728 729 730 731 732 733 734 735 736 737 738 739 740 741 742 743 744 745 746 747 748 749 750 751 752 753 754 755 756 757 758 759 760 761 762 763 764 765 766 767 768 769 770 771 772 773 774 775 776 777 778 779 780 781 782 783 784 785 786 787 788 789 790 791 792 793 794 795 796 797 798 799 800 801 802 803 804 805 806 807 808 809 810 811 812 813 814 815 816 817 818 819 820 821 822 823 824 825 826 827 828 829 830 831 832 833 834 835 836 837 838 839 840 841 842 843 844 845 846 847 848 849 850 851 852 853 854 855 856 857 858 859 860 861 862 863 864 865 866 867 868 869 870 871 872 873 874 875 876 877 878 879 880 881 882 883 884 885 886 887 888 889 890 891 892 893 894 895 896 897 898 899 900 901 902 903 904 905 906 907 908 909 910 911 912 913 914 915 916 917 918 919 920 921 922 923 924 925 926 927 928 929 930 931 932 933 934 935 936 937 938 939 940 941 942 943 944 945 946 947 948 949 950 951 952 953 954 955 956 957 958 959 960 961 962 963 964 965 966 967 968 969 970 971 972 973 974 975 976 977 978 979 980 981 982 983 984 985 986 987 988 989 990 991 992 993 994 995 996 997 998 999 1000 1001 1002 1003 1004 1005 1006 1007 1008 1009 1010 1011 1012 1013 1014 1015 1016 1017 1018 1019 1020 1021 1022 1023 1024 1025 1026 1027 1028 1029 1030 1031 1032 1033 1034 1035 1036 1037 1038 1039 1040 1041 1042 1043 1044 1045 1046 1047 1048 1049 1050 1051 1052 1053 1054 1055 1056 1057 1058 1059 1060 1061 1062 1063 1064 1065 1066 1067 1068 1069 1070 1071 1072 1073 1074 1075 1076 1077 1078 1079 1080 1081 1082 1083 1084 1085 1086 1087 1088 1089 1090 1091 1092 1093 1094 1095 1096 1097 1098 1099 1100 1101 1102 1103 1104 1105 1106 1107 1108 1109 1110 1111 1112 1113 1114 1115 1116 1117 1118 1119 1120 1121 1122 1123 1124 1125 1126 1127 1128 1129 1130 1131 1132 1133 1134 1135 1136 1137 1138 1139 1140 1141 1142 1143 1144 1145 1146 1147 1148 1149 1150 1151 1152 1153 1154 1155 1156 1157 1158 1159 1160 1161 1162 1163 1164 1165 1166 1167 1168 1169 1170 1171 1172 1173 1174 1175 1176 1177 1178 1179 1180 1181 1182 1183 1184 1185 1186
package osp;

import java.util.List;
import java.awt.geom.Point2D;
import java.io.File;
import java.io.IOException;
import java.util.Iterator;
import java.lang.Math;

import jsky.coords.WorldCoords;
import jsky.image.fits.codec.FITSImage;
import jsky.image.gui.ImageCoordinateConverter;
import nom.tam.fits.FitsException;

import org.jdom.Document;
import org.jdom.Element;
import org.jdom.input.SAXBuilder;

import osp.ui.OSPE_MainFrame;
import osp.utils.CustomJDialog;
import osp.utils.Tools;

/**
 * Class used to read an XML file and load a project or a mask.
 */
public class Reader {
	// Attributes
	// -----------
	/** Document to read */
	private static Document document;
	/** Field of view root element (root when loading a project) */
	private static Element fovElement;
	/** Mask root element (root when loading a mask) */
	private static Element mask;

	/** Parent Main Frame */
	private OSPE_MainFrame pater;
	/** Field of view */
	private FieldOfView fov;
	private Image image;

	private int res=-1;
	
	private int selectedMask = -1;
	private String absPath = null;
	
	private String loadError = null;
	
	private int minJoinedSlit=-1;
	
	private int[][] slitJoinArray = new int [55][2];

	/**
	 * Constructs a new reader.
	 * 
	 * @param p
	 *            Main frame of the application.
	 * @param fov 
	 * 			Field of view of the application 
	 */
	public Reader(OSPE_MainFrame p, FieldOfView fov) {
		pater = p;
		this.fov = fov;
	}

	/**
	 * Reads a project from a file. Returns 1 if the project has been loaded
	 * correctly, -1 if an error occurred.
	 * 
	 * @param fileName
	 *            Path of the file containing the project to read.
	 * @return 1 if the project has been loaded correctly, -1 if there has been
	 *         an error.
	 */
	public int read(String fileName) {
		SAXBuilder saxB = new SAXBuilder();
	
		try {
			document = saxB.build(new File(fileName));
		} catch (Exception e) {
		}

		fovElement = document.getRootElement();
		String nameDoc=document.getRootElement().getName();
		String f="fieldOfView";
		if (f.equals(nameDoc))
		{
			res = loadProject();
			return res;
		}
		else 
		
			return res=-1;
	}

	/**
	 * Loads the project, iterating through the XML nodes.
	 * 
	 * @return 1 if the project has been loaded correctly, -1 if there has been
	 *         an error.
	 */
	@SuppressWarnings("unchecked")
	private int loadProject() {
		int res = -1;
		
		// init associated slits array
		for (int i=0;i<55;i++)
		{
			slitJoinArray[i][0]=0;
			slitJoinArray[i][1]=0;
		}
		
		List<Element> imagesElementList = fovElement.getChildren("image");
		Iterator<Element> iterator = imagesElementList.iterator();
		boolean noError = true;
		while (noError && iterator.hasNext()) {
			Element currentElementImage = iterator.next();
			noError = loadImageMaskAndObject(currentElementImage);
		} 
		if (noError){
			if (fov.getNbrImages() > 0){
				int selectedImage = -1;
				if (fovElement.getAttribute("selectedImage") != null)
					selectedImage = Integer.parseInt(fovElement.getAttributeValue("selectedImage"));
				fov.setSelectedImage(selectedImage);
				pater.updateButtons();
			}
			if (fov.getSelectedImage() >= 0){
				pater.getVisuPanel().getNavigatorImageDisplay().setState(2); 
			} else {// display is empty
				pater.getVisuPanel().getNavigatorImageDisplay().setState(0); 
			}
			res = 1;
		}
		return res;
	}

	/**
	 * Load image properties from a project file
	 * @param noError
	 * @param currentImage
	 * @return
	 */
	private boolean loadImageMaskAndObject(Element currentImage) {
		boolean noError = true;
		noError = loadImageAndProperties(currentImage);
		
		if (noError) {			
			noError = loadObjects(currentImage); 
		}
		if (noError) {
			noError = loadMasks(currentImage); 
		}
		if (noError) {
			image.addObserver(pater.getVisuPanel());
			image.addObserver(pater.getSelectPanel());
			image.addObserver(pater.getTableurPanel());
			if (image.getNbrMasks() > 0)
				image.setSelectedMask(selectedMask);
			if (image.getSelectedMask() >= 0) {
				pater.getVisuPanel().searchButton.setEnabled(true);
				pater.getVisuPanel().validateButton.setEnabled(true);
				pater.getVisuPanel().writeButton.setEnabled(true);

				final Mask currentMask = image.getCurrentMask();
				currentMask.addObserver(pater.getOspeControl());
				currentMask.addObserver(pater.getVisuPanel());
				currentMask.addObserver(pater.getSelectPanel());
				currentMask.getCurrentSlit().addObserver(pater.getVisuPanel());

				pater.getVisuPanel().slitCombo.setSelectedIndex(currentMask.getSelectedSlit());
				pater.getVisuPanel().updateSlides();
			}
		}
		return noError;
	}

	/**
	 * Load mask properties from a project file
	 * @param imageElement : mask from image.
	 * @return boolean noError
	 */
	@SuppressWarnings("unchecked")
	private boolean loadMasks(Element imageElement) {
		boolean noError = true;
		// Mask UUID
		String m_uuid="";
		List<Element> masksElementList = imageElement.getChildren("mask");
		Iterator<Element> iterator = masksElementList.iterator();
		while (noError && iterator.hasNext()) {
			Element maskElement = iterator.next();
			Point2D.Double maskCenter = new Point2D.Double();
			double maskAlpha=0.0, maskDelta=0.0, maskAngle = 0.0;
//			HMS maskLeftCornerAlpha= new HMS();
//			DMS maskLeftCornerDelta= new DMS();
			boolean maskValidation = false;
			int selectedSlit = -1;
			Point2D.Double mTmpCenter = new Point2D.Double();
			Point2D.Double mTmpLeftCorner = new Point2D.Double();
			
			try {
				
//				if (maskElement.getChild("maskUUID")!= null)
//				{
//	              m_uuid=maskElement.getChild("maskUUID").getText();; 
//				}
//				else m_uuid="N/A";
	//System.out.println("Reader loadMask UUID = "+m_uuid);
	
				maskCenter.x = Double.parseDouble(maskElement.getChild("center").getChild("x").getValue());
				maskCenter.y = Double.parseDouble(maskElement.getChild("center").getChild("y").getValue());
				maskAlpha = Double.parseDouble(maskElement.getChild("alpha").getValue());
				maskDelta = Double.parseDouble(maskElement.getChild("delta").getValue());
				maskAngle = Double.parseDouble(maskElement.getChild("angle").getValue());
				mTmpCenter = new Point2D.Double(maskAlpha, maskDelta);
				
				if (maskElement.getChild("maskCoordLeftCorner")!= null)
				{
					String raLeftC = maskElement.getChild("maskCoordLeftCorner").getChild("ra").getText();
					String decLeftC = maskElement.getChild("maskCoordLeftCorner").getChild("dec").getText();
					
					WorldCoords wcM =new WorldCoords(raLeftC,decLeftC);		
					mTmpLeftCorner = new Point2D.Double(wcM.getRaDeg(),wcM.getDecDeg());
//					maskLeftCornerAlpha = wcM.getRA();
//					maskLeftCornerDelta =  wcM.getDec();	
				}
				
				
				if (maskElement.getAttribute("validated") != null && 
					maskElement.getAttribute("validated").equals("true"))
					maskValidation = true;
			
				if (maskElement.getAttribute("selectedSlit") != null)
					selectedSlit = Integer.parseInt(maskElement.getAttributeValue("selectedSlit"));
			} catch (Exception err2) {
				loadError = "Error loading Mask properties !";
				new CustomJDialog(loadError, CustomJDialog._ERROR_,CustomJDialog._CLOSE_BUTTON_, pater);
				noError = false;
			}
			
			if (noError) {
		
				noError = addMaskToImage(maskElement, maskCenter, mTmpCenter, mTmpLeftCorner,
						maskAngle, maskValidation, selectedSlit);

				Image currentImage = fov.getCurrentImage();
				Mask currentMask=currentImage.getCurrentMask();
				 currentMask.addObserver(pater.getVisuPanel());
				 currentMask.addObserver(pater.getSelectPanel());
				 currentMask.addObserver(pater.getOspeControl());
//				if (m_uuid.equals("N/A")) currentMask.setM_uuid();
//				else currentMask.set_uuid_fromF(m_uuid);
			}
		}
		return noError;
	}

	/**
	 * Add mask to the image
	 * @param maskElement : Element figuring mask
	 * @param maskCenter :  Mask Center point in canvas coord
	 * @param maskCenterDeg  : Mask Center point in degree
	 * @param maskLeftCorner : Mask left bottom corner in WorldCoords.
	 * @param maskAngle : Mask rotation angle
	 * @param maskValidation : yes/no if the mask is validated
	 * @param selectedSlit : Selected slit id. 
	 * @return
	 */
	@SuppressWarnings("unchecked")
	protected boolean addMaskToImage(Element maskElement,  Point2D.Double maskCenter,
			Point2D.Double maskCenterDeg, Point2D.Double maskLeftCorner,  
			double maskAngle, boolean maskValidation, int selectedSlit) {
		
		boolean noError = true;
		image.addMask(maskCenter);
		image.getCurrentMask().setCenterWc(maskCenterDeg.getX(), maskCenterDeg.getY());
		image.getCurrentMask().setCenterDeg(maskCenterDeg);
		image.getCurrentMask().setOmega(maskAngle);
		image.getCurrentMask().init2Display();
		
		if ((maskLeftCorner.getX()!= 0.0) && (maskLeftCorner.getY() != 0.0))
		{
//System.out.println("Reader addMaskToImage - left corner ra "+maskLeftCorner.getX());
			image.getCurrentMask().setLeftCornerWc(maskLeftCorner.getX(), maskLeftCorner.getY());
//			image.getCurrentMask().setAlphaCorner(mLeftCnRa);
//			image.getCurrentMask().setDeltaCorner(mLeftCnDec);
		}
		else 
		{
			calculateMaskLeftCorner(image.getCurrentMask(), false);
		}
		
		// Load slits
		List<Element> slitsList = maskElement.getChild("slitsList").getChildren("slit");
		Iterator<Element> k = slitsList.iterator();
		
		while (noError && k.hasNext()) 
		{
			Element currentSlit = k.next();
			noError = loadSlit(currentSlit);
			
		}
		
		// Associated slits when joined 
		int l=0;
		int mnslit=100,mxslit=0,vslit=0,rslit=0,refSlit=0;
		for (l=0;l<55;l++)
		{
			if (slitJoinArray[l][0]>0)
			{
				vslit=l;
				rslit=slitJoinArray[l][1];
				if (refSlit==0) refSlit=rslit;

				if (refSlit!=rslit)
					{
					associatedSlit(mnslit, mxslit);
					refSlit=rslit;
					mnslit=100;
					mxslit=0;
					}
				if (refSlit==rslit)
				{
					if (vslit<mnslit) 
					{
						mnslit=vslit;
					}
					if (vslit>mxslit) 
					{
						mxslit=vslit;
					}	
				}
				
			}
								
		}
		associatedSlit(mnslit, mxslit);
		
		
		if (noError) 
		{
			// Set the selected slit
			image.getCurrentMask().setCurrentSlit(selectedSlit);
		}
		return noError;
	}

	/**
	 *  Load objects from a project file
	 * @param imageElement
	 * @param noError
	 * @return
	 */
	@SuppressWarnings("unchecked")
	private boolean loadObjects(Element imageElement) {
		
		boolean noError = true;
		List<Element> objectsLists = imageElement.getChildren("objectsList");
		Iterator<Element> iterator = objectsLists.iterator();
	
		while (iterator.hasNext()) {
			Element currentObjectsList = iterator.next();
			List<Element> skyObjectsList = currentObjectsList.getChildren("skyObject");
			Iterator<Element> n = skyObjectsList.iterator();
			while (noError && n.hasNext()) {
				Element skyObjectElement = n.next();
				// Load object properties
				int objectId = 0;
				String idCatObj="";
				int numObject =0;
				int nbCat =0;
				String objectFrom = "-1";
				String objectCatLib = "";
				int group; 
				boolean objectIsRef = false;
				Point2D.Double objectPosition = new Point2D.Double();
				Point2D.Double objectNewPosition = null;
				int objectPriority = 0;
				WorldCoords wcObject=new WorldCoords();
				WorldCoords wcObjectRecalc=new WorldCoords();
				boolean recalc=false;
				String ra="",dec="";
				//System.out.println("reader- ob ");
				String [] tab = new String[] {" "," ", " ", " ", " "};
				
				try 
				{
					if (skyObjectElement.getAttribute("id") != null)
					{
						objectId  = Integer.parseInt(skyObjectElement.getAttributeValue("id"));

					}
					 
				   if (skyObjectElement.getAttribute("group") != null)	
				   {
					   objectFrom = skyObjectElement.getAttribute("group").getValue();
				   }
										
					if (skyObjectElement.getChildText("libelleFrom") != null)
						objectCatLib = skyObjectElement.getChildText("libelleFrom");
					
					if (skyObjectElement.getChild("priority") != null) {
						
						String objP = skyObjectElement.getChild("priority").getValue();
						objectPriority = Integer.valueOf(objP);
					}
//					else 
//						System.out.println("reader- ob prior N");
					
					 if (skyObjectElement.getAttributeValue("idCat") != null)	
					   {
						   idCatObj = skyObjectElement.getAttributeValue("idCat");
					   }
					
					if (skyObjectElement.getAttributeValue("isRef") != null)
						objectIsRef = skyObjectElement.getAttributeValue("isRef").equals("true");
					objectPosition.x = Double.parseDouble(skyObjectElement
							.getChild("position").getChild("x").getValue());
					objectPosition.y = Double.parseDouble(skyObjectElement
							.getChild("position").getChild("y").getValue());
					if (skyObjectElement.getChild("objCoord") != null) 
					{
						ra = skyObjectElement.getChild("objCoord").getChildText("ra");
						dec = skyObjectElement.getChild("objCoord").getChildText("dec");
						wcObject= new WorldCoords(ra, dec);
					}
				
					if (skyObjectElement.getChild("newPosition") != null) 
					{
						objectNewPosition = new Point2D.Double();
						objectNewPosition.x = Double.parseDouble(skyObjectElement
								.getChild("newPosition").getChild("x").getValue());
						objectNewPosition.y = Double.parseDouble(skyObjectElement
								.getChild("newPosition").getChild("y").getValue());
						objectFrom=objectFrom+"(R)";
						recalc=true;
					}
					if (skyObjectElement.getChild("objNewCoord") != null) 
					{
						ra = skyObjectElement.getChild("objNewCoord").getChildText("ra");
						dec = skyObjectElement.getChild("objNewCoord").getChildText("dec");
						wcObjectRecalc= new WorldCoords(ra, dec);
						recalc=true;
					}
					
					try {
						nbCat = Integer.valueOf(objectFrom);
						}
						catch (Exception e) {
							nbCat=-1;
						}
					
					numObject=image.getNbrObjects();

//					image.addObject(objectId, numObject, objectIsRef, nbCat, objectCatLib, objectPosition, wcObject, objectPriority );
					image.addObject(idCatObj, numObject, objectIsRef, nbCat, objectCatLib, objectPosition, wcObject, objectPriority );

					if (recalc)
					{
					   SkyObject lastObject = image.getLastObject();
					   lastObject.setPosPixRecalc(objectNewPosition);
					   lastObject.setObjWorldRecalc(wcObjectRecalc);
					}
					
				} 
				catch (Exception err4) 
				{
					loadError = "Error loading Sky objects properties !";
					new CustomJDialog(loadError, CustomJDialog._ERROR_,
							CustomJDialog._CLOSE_BUTTON_, pater);
					noError = false;
				}
			}
		}
		return noError;
	}

	/**
	 * @param currentImage
	 * @param noError
	 * @return
	 */
	private boolean loadImageAndProperties(Element currentImage) {
		boolean noError = true;
		try {
			
			absPath = currentImage.getAttributeValue("absPath");
		
			if (!testIfFileExist(absPath)) 
			{
				String mess = "Error - one of project Image file does not exist !";
				new CustomJDialog(mess, CustomJDialog._ERROR_, CustomJDialog._CLOSE_BUTTON_, pater);
				noError = false;
			}
			
			String imName=null;
			String imCat=null;
			if (currentImage.getChild("imageName") != null)
				imName = currentImage.getChild("imageName").getText();
			if (currentImage.getChild("imageCatalog") != null)
				imCat = currentImage.getChild("imageCatalog").getText();
			/** get image position in  ..... coord */
			Point2D.Double posit = new Point2D.Double();
			posit.x = Double.parseDouble(currentImage.getChild("center").getChild("x").getValue());
			posit.y = Double.parseDouble(currentImage.getChild("center").getChild("y").getValue());
			
			/** get image center in world coord  */
			String valRa, valDec;
			valRa = currentImage.getChild("coordinates").getChild("ra").getText();
			valDec = currentImage.getChild("coordinates").getChild("dec").getText();
			WorldCoords imCenterWc = new WorldCoords(valRa,valDec); 
			
			
			float scale = Float.parseFloat(currentImage.getChild("scale").getValue());
			double resol = Double.parseDouble(currentImage.getChild("resol").getValue());
			double lowCut = 1.0, highCut = 1.0;
			int flgColor = 0, flgCutLevels = 0;
			if (currentImage.getChild("lowCut") != null) {
				lowCut = Double.parseDouble(currentImage.getChild("lowCut").getValue());
				flgCutLevels = 1;
			}
			if (currentImage.getChild("highCut") != null){
				highCut = Double.parseDouble(currentImage.getChild("highCut").getValue());
			}
			String colorMap = " ", colorIntens = " ";
			if (currentImage.getChild("colorMap") != null) {
				colorMap = currentImage.getChild("colorMap").getText();
				flgColor = 1;
			}
			if (currentImage.getChild("colorIntensity") != null)
				colorIntens = currentImage.getChild("colorIntensity").getText();
			Element colorAlgo = null;
			int cAlgo = 0;
			if (currentImage.getChild("colorAlgo") != null)
				colorAlgo = currentImage.getChild("colorAlgo");
			if (colorAlgo != null)
				cAlgo = Integer.parseInt(currentImage.getChild("colorAlgo").getValue());
			
			if (noError)
			{
			// Add the image to the project and set its properties
			image = loadImage(fov, absPath, posit, imCenterWc, scale, resol, lowCut, highCut, 
							flgColor, flgCutLevels, colorMap, colorIntens, cAlgo, imName, imCat);
			
			selectedMask = -1;
			if (currentImage.getAttribute("selectedMask") != null)
				selectedMask = Integer.parseInt(currentImage.getAttributeValue("selectedMask"));

			}
		} catch (NumberFormatException | NullPointerException err1) {
			loadError = "Error loading Image properties !";
			new CustomJDialog(loadError, CustomJDialog._ERROR_, CustomJDialog._CLOSE_BUTTON_, pater);
			noError = false;
		} catch (FitsException | IOException exception) {
			loadError = "Error loading Image: " + absPath;
			new CustomJDialog(loadError, CustomJDialog._ERROR_, CustomJDialog._CLOSE_BUTTON_,pater);
			noError = false;
		}
		return noError;
	}

	private boolean testIfFileExist(String pathFile) 
	{
		boolean noError = true;
		File testFile=new File(pathFile);

		if (testFile.exists())
			noError=true;
		else
			noError=false;
	
		return noError;
	}

	/**
	 *  loadImage : create an image, add it to the image list of the field of view
	 * @param fov : Field of view
	 * @param absPath : path of image
	 * @param posit : image position in world coord
	 * @param scale : image scale
	 * @param resol : image resolution 
	 * @param lowCut : if some low cut level value positionned, take this value
	 * @param highCut :  if some hight cut level value positionned, take this value
	 * @param flgColor : flag to indicate that there are colors to integrate
	 * @param flgCutLevels : flag to indicate that there are cut levels to integrate
	 * @param colorMap : Value of the color map
	 * @param colorIntens : intensity color value
	 * @param cAlgo : value of the color algorithm
	 * @param imName : name of the image if there is one (some old projects may not have this parameter)
	 * @param imCat : catalog name if there is one. 
	 * @return
	 * @throws IOException
	 * @throws FitsException
	 */
	public static Image loadImage(FieldOfView fov, String absPath, Point2D.Double posit, 
			WorldCoords imCenterCoords, float scale, double resol, double lowCut, 
			double highCut,	int flgColor, int flgCutLevels, String colorMap, 
			String colorIntens,	int cAlgo, String imName, String imCat) 
					throws IOException, FitsException {
		
		fov.addImage(new FITSImage(absPath), posit, scale, imName, imCat);
		
		Image image = fov.getCurrentImage();
		image.setAbsPath(absPath);
		image.setImCenterWc(imCenterCoords.getRA(), imCenterCoords.getDec());
		image.setResol(resol);
		
		// Display the cuts levels
		if (flgCutLevels > 0) {
			image.setLowCut(lowCut);
			image.setHighCut(highCut);
			flgCutLevels = 0;
		}
		// Read if there are image's colors
		if (flgColor > 0) {
			// Set this parameters on image characteristics
			image.setColorMap(colorMap);
			image.setColorIntensity(colorIntens);
			image.setColorAlgorithm(cAlgo);

			// Re-init
			flgColor = 0;
		}
		
		return image;
	}


	/**
	 * Load slit properties when loading a project
	 * @param slitElement
	 * @param j TODO
	 * @param noError
	 * @return
	 */
	private boolean loadSlit(Element slitElement) {

		boolean noError = true;
		int id = 0;
		int affectedObject = -1;
		double position=0.0, aperture = 0.0;
		Element e_slitDegCoord= slitElement.getChild("slitDegCoord");
		String slitRa;
		String slitDec;
		WorldCoords wcSlit=new WorldCoords(0,0);
		boolean slitExist=false;
		boolean isJoined=false;
		int joinedSlitId=-1;
	
		try {
			    id = Integer.parseInt(slitElement.getAttributeValue("id"));
						
				slitExist=true;
				if (id>0) id--;
				
				position = Double.parseDouble(slitElement.getChild("position").getValue());
				aperture = Double.parseDouble(slitElement.getChild("width").getValue());
				if (slitElement.getChild("affectedObject")!=null)
					affectedObject = Integer.parseInt(slitElement.getChild("affectedObject").getValue());
				
				if (e_slitDegCoord != null)
				{
					slitRa=e_slitDegCoord.getChild("raDeg").getText();
					slitDec=e_slitDegCoord.getChild("decDeg").getText();	
					wcSlit=new WorldCoords(slitRa,slitDec);
				}
				
				if (slitElement.getChild("isJoined") != null)
				{
					String val=slitElement.getChild("isJoined").getValue();
					if (val.equals("true"))
						isJoined=true;
				}
				
							
				if (slitElement.getChild("joinedRefSlit") != null)
				{
					joinedSlitId = Integer.parseInt(slitElement.getChild("joinedRefSlit").getValue());

            	 } 

 
			final Slit slit = image.getCurrentMask().getSlit(id);
			slit.setPosition(position);
			slit.setAperture(aperture);
			
			if (slitExist)
			{
				if (e_slitDegCoord != null)
				{
					Point2D.Double p=new Point2D.Double(wcSlit.getRaDeg(), wcSlit.getDecDeg());
					slit.setWcPosCenter(p);
					slit.fSkyCoord=true;
					slit.addObserver(pater.getVisuPanel());
				}
				if (affectedObject>0)
					slit.setAffectedObject(affectedObject);
				
				if (isJoined) 
				{
					slit.setIsJoined(true);
					slit.setJoinedRefSlit(joinedSlitId-1);
				
					slitJoinArray[id][0]=id;
					int ref= joinedSlitId-1;
					slitJoinArray[id][1]=ref;
				
				} // endif Joined
			} // End Slit
			
			
		} catch (Exception err3) {
			loadError = "Error loading Slit properties !";
			new CustomJDialog(loadError, CustomJDialog._ERROR_,
					CustomJDialog._CLOSE_BUTTON_, pater);
			noError = false;
		}
		return noError;
	}

	/**
	 * Reads a mask from a file. Returns 1 if the mask has been loaded
	 * correctly, -1 if an error occurred.
	 * 
	 * @param fileName
	 *            Path of the file containing the mask to read.
	 * @return 1 if the mask has been loaded correctly, -1 if there has been an
	 *         error.
	 */
	public int readMask(String fileName) {
		SAXBuilder sxb = new SAXBuilder();
		try {
			document = sxb.build(new File(fileName));
		} catch (Exception e) {
		}

		mask = document.getRootElement();
		String nameDoc=document.getRootElement().getName();
		
		String mk="mask";
		if (mk.equals(nameDoc))
		{
			res = loadMask();
			return res;
		}
		else 
		
			return res=-1;
	}

	/**
	 * Loads the mask from a mask file
	 * 
	 * @return 1 if the mask has been loaded correctly, -1 if there has been an
	 *         error.
	 */
	@SuppressWarnings("unchecked")
	private int loadMask() {
		Image currentImage = fov.getCurrentImage();

		// Load mask properties
		// Point2D.Double maskCenter = new Point2D.Double();
//		Point2D.Double maskCenterTmp = new Point2D.Double();	
		
		Point2D.Double maskCenterDeg = new Point2D.Double();
		Point2D.Double maskCenterConv = new Point2D.Double();

		boolean maskValidation = false;
		int selectedSlit = -1;
        
		// Mask UUID
		String m_uuid;
		
		double maskAlpha =0, maskDelta=0, maskAngle=0, maskBaseAngle=0;
		
		String raLeftC="",decLeftC="";
//		HMS maskLeftCornerAlpha= new HMS();
//		DMS maskLeftCornerDelta= new DMS();
		WorldCoords wcMkCorner =new WorldCoords();
		
		// Load mask properties

		try 
		{
			if (mask.getChild("maskUUID")!= null)
			{
              m_uuid=mask.getChild("maskUUID").getText();; 
			}
			else m_uuid="N/A";
//System.out.println("Reader loadMask UUID = "+m_uuid);
			
			maskAlpha = Double.parseDouble(mask.getChild("alpha").getValue());		
			maskDelta = Double.parseDouble(mask.getChild("delta").getValue());
			maskAngle = Double.parseDouble(mask.getChild("angle").getValue());

			if (mask.getChild("maskCoordLeftCorner")!= null)
			{
				 raLeftC = mask.getChild("maskCoordLeftCorner").getChild("ra").getText();
				 decLeftC = mask.getChild("maskCoordLeftCorner").getChild("dec").getText();
				
				wcMkCorner =new WorldCoords(raLeftC,decLeftC);
				
//				maskLeftCornerAlpha = wcMkCorner.getRA();
//				maskLeftCornerDelta =  wcMkCorner.getDec();
				
			}
			
			if (mask.getAttribute("validated") != null)
				maskValidation = mask.getAttribute("validated").equals("true");

			if (mask.getAttribute("selectedSlit") != null)
				selectedSlit = Integer.parseInt(mask.getAttributeValue("selectedSlit"));
		}
		catch (Exception err1) 
		{
			loadError = "Error loading Mask properties ! ";
			new CustomJDialog(loadError, CustomJDialog._ERROR_, CustomJDialog._CLOSE_BUTTON_, pater);
			return 0;
		}

		// Set the mask center in degrees.
		maskCenterDeg.setLocation(maskAlpha, maskDelta);
 
		// Test if the mask is inside the image.

		if (!fitsIn(maskCenterDeg, currentImage)) 
		{
			String mess = "The mask is not included in the image";
			new CustomJDialog(mess, CustomJDialog._ERROR_, CustomJDialog._CLOSE_BUTTON_, pater);
			return -1;
		}

		/** Used to convert the center in canvas coord to display*/
		maskCenterConv.setLocation(maskCenterDeg);
		
//		/** Used to testing */
		//maskCenterTmp.setLocation(maskCenterDeg);
		
		/** Tool to convert the coordinates */
//		ImageCoordinateConverter icc = new ImageCoordinateConverter(pater.getVisuPanel().getNavigatorImageDisplay());
		ImageCoordinateConverter icc = pater.getVisuPanel().getIcc();
//		icc.worldToImageCoords(maskCenterTmp, false);
		// System.out.println("453- Reader : LoadMask W2Image x:"+maskCenterConv.x+" "+maskCenterConv.y);
//		icc.imageToCanvasCoords(maskCenterTmp, false);
		// System.out.println("455- Reader : LoadMask Im2Can x:"+maskCenterConv.x+" "+maskCenterConv.y);

		/** Converting center world coord in canvas */
		icc.worldToCanvasCoords(maskCenterConv, false);
//		System.out.println("459- Reader : LoadMask W2Canvas x:" + maskCenterTmp.x + " "
//				+ maskCenterTmp.y);

		// Add the mask to the current image
		currentImage.addMask(maskCenterConv);

		Mask currentMask = currentImage.getCurrentMask();
//		if (m_uuid.equals("N/A")) currentMask.setM_uuid();
//		else currentMask.set_uuid_fromF(m_uuid);
		
		currentMask.setCenterWc(maskAlpha, maskDelta);
		currentMask.setOmega(maskAngle);
		currentMask.setCenterDeg(maskCenterDeg);
		currentMask.init2Display();
		
		double valRa=0;
		double valDec=0;
		valRa = wcMkCorner.getRaDeg();
		valDec = wcMkCorner.getDecDeg();
		
 /** A VERIFIER **/ 		
//		if ((valRa !=0.0) && (valDec!=0.0))
//		{
//		 
//			currentMask.setMkLeftCornerWc(raLeftC, decLeftC);
//			maskBaseAngle = addGoodBaseOmegaByImage(currentMask);
//		}
//		else 
			calculateMaskLeftCorner(currentMask,true);
		
		//if (maskLeftCornerAlpha != null)
			//currentMask.setAlphaCorner(maskLeftCornerAlpha);
		//if (maskLeftCornerDelta != null) 
			//currentMask.setDeltaCorner(maskLeftCornerDelta);
		
	/** A VERIFIER **/ 	
//		if (maskBaseAngle > 0.1) 
//		{
//			System.out.println("Add Angle :" + maskBaseAngle);
//			currentMask.setOmega((maskAngle + maskBaseAngle) % 360);
//		}
		
		currentMask.validated = maskValidation;
         
		if (currentMask.validated)
		{
			currentMask.turnEnable =true;
			currentMask.moveEnable= true;
			
		}
		else 
		{
			currentMask.turnEnable =false;
			currentMask.moveEnable= false;
		}
		
		// Load slits
		List<Element> listSlits = mask.getChild("slitsList").getChildren("slit");
		Iterator<Element> k = listSlits.iterator();
	
		double position=0.0, aperture = 0.0;

		while (k.hasNext()) 
		{
			Element currentSlit = k.next();
		
				// Load slit properties
			int id = 0;

			try 
			{
				id = Integer.parseInt(currentSlit.getAttributeValue("id"));

				if (id>0) id--;	
				position = Double.parseDouble(currentSlit.getChild("position").getValue());
				aperture = Double.parseDouble(currentSlit.getChild("width").getValue());

				
			} 
			catch (Exception err2) 
			{
				loadError = "Error loading Slit properties !";
				new CustomJDialog(loadError, CustomJDialog._ERROR_, CustomJDialog._CLOSE_BUTTON_, pater);
				return -1;
			}
							
			// Set slit properties
			currentMask.getSlit(id).setPosition(position);
			currentMask.getSlit(id).setAperture(aperture);
				
		}// End slits iterator

		currentMask.setCurrentSlit(selectedSlit);

		// Load reference objects
		List<Element> refObjectsList = mask.getChildren("refObject");
		Iterator<Element> l = refObjectsList.iterator();

//		int idObj=-1;
		String idObj="-1";

		while (l.hasNext()) 
		{
			Element currentRefObject = l.next();

			// Load reference object properties
			String objectCatLib = "";
	
			if (currentRefObject.getChildText("libelleFrom") != null)
				objectCatLib = currentRefObject.getChildText("libelleFrom");
			else 
				objectCatLib ="load with mask";
			
			Point2D.Double objectPosition = new Point2D.Double();
			WorldCoords wcRefObject = new WorldCoords(0,0);
			Point2D.Double objectNewPosition = null;

			try 
			{
				objectPosition.x = Double.parseDouble(currentRefObject.getChild("position")
						.getChild("x").getValue());
				objectPosition.y = Double.parseDouble(currentRefObject.getChild("position")
						.getChild("y").getValue());
				wcRefObject = new WorldCoords(objectPosition.x ,objectPosition.y);
				icc.worldToImageCoords(objectPosition, false);

				if (currentRefObject.getChild("newPosition") != null) 
				{
					objectNewPosition = new Point2D.Double();
					objectNewPosition.x = Double.parseDouble(currentRefObject
							.getChild("newPosition").getChild("x").getValue());
					objectNewPosition.y = Double.parseDouble(currentRefObject
							.getChild("newPosition").getChild("y").getValue());
					icc.worldToImageCoords(objectNewPosition, false);
				}
			} 
			catch (Exception err3) 
			{
				loadError = "Error loading Reference Objects properties !";
				new CustomJDialog(loadError, CustomJDialog._ERROR_, CustomJDialog._CLOSE_BUTTON_, pater);
				return -1;
			}

			// Add the object to the image if it doesn't exist,
			// or set the object as a reference if it does.
			boolean exists = false;

			for (int i = 0; i < currentImage.getNbrObjects(); i++) {
				SkyObject sk = currentImage.getListObjects().get(i);
//				if (objectPosition.equals(sk.getPosPix())
//						|| objectPosition.equals(sk.getPosPixRecalc())) {
				if (objectPosition.equals(sk.getInitPos())
						|| objectPosition.equals(sk.getInitPos())) {
					sk.setRef(true);
					idObj=sk.getTargetId();
					exists = true;
					break;
				}
			}
			if (!exists) {
				int prior=0;
				int nbCat=-1;
				String [] tab = new String[] {" "," "," "," "};
				String temp=" ";
				currentImage.addObject(idObj,true,nbCat, temp, objectPosition, wcRefObject,prior);
				currentImage.getLastObject().setPosPixRecalc(objectNewPosition);
			}
		}// End reference objects iterator

		currentMask.addObserver(pater.getOspeControl());
		currentMask.addObserver(pater.getVisuPanel());
		currentMask.addObserver(pater.getSelectPanel());

		currentMask.getCurrentSlit().addObserver(pater.getVisuPanel());

		pater.getVisuPanel().slitCombo.setSelectedIndex(currentMask.getSelectedSlit());
		pater.getVisuPanel().updateSlides();

		currentMask.update();

		return 1;
	}
	
	/**
	 * Calculate the left corner of the mask in prevision when a rotation is applied
	 * @param currentMask : Current Mask 
	 * @param from : true if loading a mask alone, false if loading a project 
	 */
	private void calculateMaskLeftCorner(Mask currentMask, boolean from) {
		
		// set the new mask's Corner left coordinates
		double width = currentMask.getWidth2Display();
		double height = currentMask.getHeight2Display();
		double maskDebutX = currentMask.getCenter().getX() - (width / 2.0);
		double maskDebutY = currentMask.getCenter().getY() - (height / 2.0);
		
		Point2D.Double tmpCorner = new Point2D.Double();
		tmpCorner.setLocation(maskDebutX, maskDebutY);
		currentMask.setLeftCornerPix(tmpCorner);
		
		
		if (from)
		{
			WorldCoords wcLeftMaskC = pater.getVisuPanel().getWorldCoords(tmpCorner.getX(), tmpCorner.getY());
			tmpCorner.setLocation(wcLeftMaskC.getRaDeg(), wcLeftMaskC.getDecDeg());
			currentMask.setLeftCornerDeg(tmpCorner);
//			currentMask.setAlphaCorner(wcLeftMaskC.getRA());
//			currentMask.setDeltaCorner(wcLeftMaskC.getDec());
			
		}
		else 
		{
			tmpCorner.setLocation(0.0,0.0);
			currentMask.setLeftCornerDeg(tmpCorner);
		}
	}

		
	/**
	 * Find the good omega of the mask if the image is not on the same orientation that the original image 
	 */
	private double addGoodBaseOmegaByImage(Mask currentMask)
	{

//	System.out.println("AddGoodBaseOmegaByImage");

		int	   clockwise;

		double res;

		double width = currentMask.getWidth2Display();
		double height = currentMask.getHeight2Display();
		double maskDebutX = currentMask.getCenter().x - (width / 2.0);
		double maskDebutY = currentMask.getCenter().y - (height / 2.0);
		
		res = 0.0;
		WorldCoords wc = new WorldCoords(mask.getChild("maskCoordLeftCorner").getChild("ra").getValue(), mask.getChild("maskCoordLeftCorner").getChild("dec").getValue());
		//System.out.println("Corner RA " + wc.getRA() + " DEC " + wc.getDec());
		
		WorldCoords wc2 = new WorldCoords();

		Tools tools = new Tools();

		Point2D.Double pCenter = new Point2D.Double();
		Point2D.Double pBaseLeftCorner = new Point2D.Double();
		Point2D.Double pRealLeftCorner = new Point2D.Double();

		wc = new WorldCoords(mask.getChild("maskCoordLeftCorner").getChild("ra").getValue(),
							 mask.getChild("maskCoordLeftCorner").getChild("dec").getValue());

		wc2 = pater.getVisuPanel().getWorldCoords(maskDebutX, maskDebutY);

		//System.out.println("Real Corner RA " + wc2.getRA() + " DEC " + wc2.getDec());
		//System.out.println("End AddGoodBaseBaseOmegaByImage");
	//	return res;

		pCenter.setLocation(currentMask.getCenterDeg());
		pBaseLeftCorner.setLocation(wc.getRaDeg(), wc.getDecDeg());
		pRealLeftCorner.setLocation(wc2.getRaDeg(), wc2.getDecDeg());

		clockwise =  tools.CounterClockWise(pCenter.getX(), pCenter.getY(),
                                            pRealLeftCorner.getX(), pRealLeftCorner.getY(),
											pBaseLeftCorner.getX(), pBaseLeftCorner.getY());
		res = tools.AngleOfView(pCenter.getX(), pCenter.getY(),
                                pBaseLeftCorner.getX(), pBaseLeftCorner.getY(),
                                pRealLeftCorner.getX(),pRealLeftCorner.getY());

		if (clockwise == 1)
			return (res);
		else if (clockwise == -1)
			return (360 - res);
		else
			return (0);

	}

	/**
	 * Test if a mask is included inside an image. It tests both if the world
	 * coordinates correspond (mask center in the image) and if it's fitting
	 * inside the bounds of the image.
	 * 
	 * @param mask
	 *            The mask to test.
	 * @param image
	 *            The image to test.
	 * @return true if the mask is inside the image.
	 */
	private boolean fitsIn(Point2D.Double maskCenter, Image image) {

		// Get the bottom-left and bottom right corners coordinates of the image
		Point2D.Double imBottomLeftCorner = new Point2D.Double(0, 0);
		ImageCoordinateConverter icc = new ImageCoordinateConverter(pater.getVisuPanel().getNavigatorImageDisplay());
		icc.imageToWorldCoords(imBottomLeftCorner, false);
		Point2D.Double imTopRightCorner = new Point2D.Double(image.getWidth(), image.getHeight());
		icc.imageToWorldCoords(imTopRightCorner, false);

		/**
		 * To test if the mask loaded is in the image, convert the coord to
		 * |coord| and take the min and the max of them.
		 */
		double xM = Math.max(Math.abs(imBottomLeftCorner.x), Math.abs(imTopRightCorner.x));
		double xm = Math.min(Math.abs(imBottomLeftCorner.x), Math.abs(imTopRightCorner.x));

		double yM = Math.max(Math.abs(imBottomLeftCorner.y), Math.abs(imTopRightCorner.y));
		double ym = Math.min(Math.abs(imBottomLeftCorner.y), Math.abs(imTopRightCorner.y));

		Point2D.Double imbt = new Point2D.Double(xm, ym);
		Point2D.Double imtp = new Point2D.Double(xM, yM);
		Point2D.Double mct = new Point2D.Double(Math.abs(maskCenter.x), Math.abs(maskCenter.y));
//System.out.println("Reader:FitsIn im "+imbt.x+","+imbt.y+"   "+imtp.x+","+imtp.y);
//System.out.println("Reader:FitsIn mk "+mct.x+","+mct.y);

		if (mct.x <= imbt.x || mct.y <= imbt.y || mct.x >= imtp.x || mct.y >= imtp.y)
			return false;

		return true;
	}

	public String getMessageError() {
		// TODO Auto-generated method stub
		return loadError;
	}
	
	private void associatedSlit(int min, int max)
	{

		for (int i = min; i <= max; i++) 
			{
				for (int j = i + 1; j <= max; j++)
				{
					Image currentImage = fov.getCurrentImage();
					Mask currentMask=currentImage.getCurrentMask();
					currentMask.associatedSlits[i][j] = true;
					currentMask.associatedSlits[j][i] = true;
				}
			}
	}
}