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removed redundant IDL from idl_misc
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src/idl_misc/matchdelim.pro deleted
... | ... | @@ -1,138 +0,0 @@ |
1 | -; | |
2 | -;+ | |
3 | -; NAME: | |
4 | -; MATCHDELIM | |
5 | -; PURPOSE: | |
6 | -; Match open/close delimiters in a string. | |
7 | -; CATEGORY: | |
8 | -; text/strings | |
9 | -; CALLING SEQUENCE: | |
10 | -; position = matchdelim( strn, [openpos]) | |
11 | -; INPUTS: | |
12 | -; strn -- a string containing an open in | |
13 | -; delimiter (e.g. '{') in which you | |
14 | -; want to find the matching closing | |
15 | -; delimiter (e.g. '}') | |
16 | -; KEYWORD PARAMETERS: | |
17 | -; OPEN_DELIM -- A single character containing the opening in | |
18 | -; delimiter (e.g. '('). Default is '{' | |
19 | -; CLOSE_DELIM -- A single character containing the closing in | |
20 | -; delimiter (e.g. ')'). Default is '}' | |
21 | -; OUTPUTS: | |
22 | -; position -- returns the position in strn of the out | |
23 | -; closing delimiter, -1 if no closing found. | |
24 | -; openpos -- Set to a named variable to receive the out | |
25 | -; position of the first opening delimiter. | |
26 | -; Optional. | |
27 | -; COMMON BLOCKS: | |
28 | -; SIDE EFFECTS: | |
29 | -; NOTES: | |
30 | -; - Any pair of (nonidentical) characters can be used as | |
31 | -; delimiters. | |
32 | -; EXAMPLE: | |
33 | -; matchdelim('{one{two}}three') returns 9, the character just | |
34 | -; before 'three'. | |
35 | -; MODIFICATION HISTORY: | |
36 | -; $Id: matchdelim.pro,v 1.3 1996/06/14 20:00:27 mcraig Exp $ | |
37 | -; $Log: matchdelim.pro,v $ | |
38 | -; Revision 1.3 1996/06/14 20:00:27 mcraig | |
39 | -; Updated Copyright info. | |
40 | -; | |
41 | -; Revision 1.2 1996/05/09 00:22:17 mcraig | |
42 | -; Removed restriction that open delim must be first char. Added argument | |
43 | -; to allow for return of position of open delim. | |
44 | -; | |
45 | -; Revision 1.1 1996/01/31 18:41:06 mcraig | |
46 | -; Initial revision | |
47 | -; | |
48 | -; RELEASE: | |
49 | -; $Name: Rel_2_1 $ | |
50 | -; | |
51 | -; COPYRIGHT: | |
52 | -; Copyright (C) 1996 The Regents of the University of California, All | |
53 | -; Rights Reserved. Written by Matthew W. Craig. | |
54 | -; See the file COPYRIGHT for restrictions on distrubting this code. | |
55 | -; This code comes with absolutely NO warranty; see DISCLAIMER for details. | |
56 | -;- | |
57 | -; | |
58 | -FUNCTION Matchdelim, InString, OpenPos, $ | |
59 | - OPEN_DELIM=OpenDelim, $ | |
60 | - CLOSE_DELIM=CloseDelim, $ | |
61 | - HELP=Help | |
62 | - | |
63 | -; Return to caller if error. | |
64 | - On_error, 2 | |
65 | - | |
66 | - IF (n_params() LT 1) OR keyword_set(Help) THEN BEGIN | |
67 | - offset = ' ' | |
68 | - print, offset+'Match open/close delimiters in a string.' | |
69 | - print, offset+'position = matchdelim( strn, [openpos])' | |
70 | - print, offset+'Inputs:' | |
71 | - print, offset+offset+'strn -- a string containing an open in' | |
72 | - print, offset+offset+" delimiter (e.g. '{') in which you " | |
73 | - print, offset+offset+' want to find the matching closing ' | |
74 | - print, offset+offset+" delimiter (e.g. '}')" | |
75 | - print, offset+'Keywords:' | |
76 | - print, offset+offset+'OPEN_DELIM -- A single character containing the opening in' | |
77 | - print, offset+offset+" delimiter (e.g. '('). Default is '{'" | |
78 | - print, offset+offset+'CLOSE_DELIM -- A single character containing the closing in' | |
79 | - print, offset+offset+" delimiter (e.g. ')'). Default is '}'" | |
80 | - print, offset+'Outputs:' | |
81 | - print, offset+offset+'position -- returns the position in strn of the out' | |
82 | - print, offset+offset+' closing delimiter, -1 if no closing found.' | |
83 | - print, offset+offset+'openpos -- Set to a named variable to receive the out' | |
84 | - print, offset+offset+' position of the first opening delimiter.' | |
85 | - print, offset+offset+' Optional.' | |
86 | - print, offset+'Example:' | |
87 | - print, offset+offset+"matchdelim('a{one{two}}three') returns 10, the character just" | |
88 | - print, offset+offset+" before 'three'. " | |
89 | - print, offset+offset+$ | |
90 | - "a=matchdelim('aaa[bbb(ccc)]ddd[eee]',f,OP='[',CL=']')" | |
91 | - print, offset+offset+" returns a=12 (just before ddd), f=3 "+$ | |
92 | - "(just before bbb)." | |
93 | - return, -1 | |
94 | - ENDIF | |
95 | - | |
96 | -; Set default delimiters. | |
97 | - IF n_elements(OpenDelim) EQ 0 THEN OpenDelim = '{' | |
98 | - IF n_elements(CloseDelim) EQ 0 THEN CloseDelim = '}' | |
99 | - | |
100 | -; Make sure InString has more than 1 character. | |
101 | - length = strlen(InString) | |
102 | - IF (length LE 1) THEN return,-1 | |
103 | - | |
104 | -; Return if no open delimiter | |
105 | - OpenPos = strpos( InString, OpenDelim ) | |
106 | - IF (OpenPos EQ -1) THEN BEGIN | |
107 | - print, 'Error: No opening delimiter' | |
108 | - return, -1 | |
109 | - ENDIF | |
110 | - | |
111 | -; Convert strings to array of integers to speed processing. | |
112 | - OpenDelim = fix((byte(OpenDelim))(0)) | |
113 | - CloseDelim = fix((byte(CloseDelim))(0)) | |
114 | - TmpStr = fix(byte(strmid( InString, OpenPos, length))) | |
115 | -; Leave the -1* in here. This forces conversion from BYTE to INTEGER, | |
116 | -; necessary because there are no negative BYTEs. | |
117 | - TmpStr = (TmpStr EQ OpenDelim) $ | |
118 | - -1*(TmpStr EQ CloseDelim) | |
119 | - length = n_elements(TmpStr) | |
120 | - | |
121 | -; Initialize count of number of delimiters. We've found one, the | |
122 | -; first opener. | |
123 | - BraceCnt = 1 | |
124 | - i=0 | |
125 | - WHILE (BraceCnt GT 0) AND (i LT length-1) DO BEGIN | |
126 | - i = i+1 | |
127 | - BraceCnt = BraceCnt + TmpStr(i) | |
128 | - ENDWHILE | |
129 | - | |
130 | - i = i + OpenPos | |
131 | - IF (BraceCnt GT 0) THEN i = -1 | |
132 | - return, i | |
133 | -END | |
134 | - | |
135 | - | |
136 | - | |
137 | - | |
138 | - |
src/idl_misc/mrd_hread.pro deleted
... | ... | @@ -1,96 +0,0 @@ |
1 | -pro mrd_hread, unit, header, status, SILENT = silent, FIRSTBLOCK = firstblock | |
2 | -;+ | |
3 | -; NAME: | |
4 | -; MRD_HREAD | |
5 | -; | |
6 | -; PURPOSE: | |
7 | -; Reads a FITS header from an opened disk file or Unix pipe | |
8 | -; EXPLANATION: | |
9 | -; Like FXHREAD but also works with compressed Unix files | |
10 | -; | |
11 | -; CALLING SEQUENCE: | |
12 | -; MRD_HREAD, UNIT, HEADER [, STATUS, /SILENT ] | |
13 | -; INPUTS: | |
14 | -; UNIT = Logical unit number of an open FITS file | |
15 | -; OUTPUTS: | |
16 | -; HEADER = String array containing the FITS header. | |
17 | -; OPT. OUTPUTS: | |
18 | -; STATUS = Condition code giving the status of the read. Normally, this | |
19 | -; is zero, but is set to -1 if an error occurs, or if the | |
20 | -; first byte of the header is zero (ASCII null). | |
21 | -; OPTIONAL KEYWORD INPUT: | |
22 | -; /SILENT - If set, then warning messages about any invalid characters in | |
23 | -; the header are suppressed. | |
24 | -; /FIRSTBLOCK - If set, then only the first block (36 lines or less) of | |
25 | -; the FITS header are read into the output variable. If only | |
26 | -; size information (e.g. BITPIX, NAXIS) is needed from the | |
27 | -; header, then the use of this keyword can save time. The | |
28 | -; file pointer is still positioned at the end of the header, | |
29 | -; even if the /FIRSTBLOCK keyword is supplied. | |
30 | -; RESTRICTIONS: | |
31 | -; The file must already be positioned at the start of the header. It | |
32 | -; must be a proper FITS file. | |
33 | -; SIDE EFFECTS: | |
34 | -; The file ends by being positioned at the end of the FITS header, unless | |
35 | -; an error occurs. | |
36 | -; REVISION HISTORY: | |
37 | -; Written, Thomas McGlynn August 1995 | |
38 | -; Modified, Thomas McGlynn January 1996 | |
39 | -; Changed MRD_HREAD to handle Headers which have null characters | |
40 | -; A warning message is printed out but the program continues. | |
41 | -; Previously MRD_HREAD would fail if the null characters were | |
42 | -; not in the last 2880 byte block of the header. Note that | |
43 | -; such characters are illegal in the header but frequently | |
44 | -; are produced by poor FITS writers. | |
45 | -; Converted to IDL V5.0 W. Landsman September 1997 | |
46 | -; Added /SILENT keyword W. Landsman December 2000 | |
47 | -; Added /FIRSTBLOCK keyword W. Landsman February 2003 | |
48 | -;- | |
49 | - block = string(replicate(32b, 80, 36)) | |
50 | - | |
51 | - w = [-1] | |
52 | - nblock = 0 | |
53 | - | |
54 | - while w[0] eq -1 do begin | |
55 | - | |
56 | - ; Shouldn't get eof in middle of header. | |
57 | - if eof(unit) then begin | |
58 | - free_lun, unit | |
59 | - status = -1 | |
60 | - return | |
61 | - endif | |
62 | - | |
63 | - on_ioerror, error_return | |
64 | - readu, unit, block | |
65 | - on_ioerror, null | |
66 | - | |
67 | - ; Check that there aren't improper null characters | |
68 | - ; in strings that are causing them to be truncated. | |
69 | - ; Issue a warning but continue if problems are found. | |
70 | - w = where(strlen(block) ne 80) | |
71 | - if (w[0] ne -1) then begin | |
72 | - if not keyword_set(SILENT) then message, /INF, $ | |
73 | - 'Warning-Invalid characters in header' | |
74 | - block[w] = string(replicate(32b, 80)) | |
75 | - endif | |
76 | - w = where(strmid(block, 0, 8) eq 'END ') | |
77 | - if nblock EQ 0 then begin | |
78 | - if w[0] eq -1 then header = block $ | |
79 | - else header = [block[0:w[0]]] | |
80 | - nblock = nblock + 1 | |
81 | - endif else begin | |
82 | - if not keyword_set(firstblock) then begin | |
83 | - if w[0] eq -1 then header = [header, block] $ | |
84 | - else header = [header, block[0:w[0]]] | |
85 | - endif | |
86 | - endelse | |
87 | - | |
88 | - endwhile | |
89 | - | |
90 | - status = 0 | |
91 | - return | |
92 | -error_return: | |
93 | - status = -1 | |
94 | - return | |
95 | -end | |
96 | - |
src/idl_misc/mrdfits.pro deleted
... | ... | @@ -1,2786 +0,0 @@ |
1 | -;+ | |
2 | -; NAME: | |
3 | -; MRDFITS | |
4 | -; | |
5 | -; PURPOSE: | |
6 | -; Read all standard FITS data types into arrays or structures. | |
7 | -; | |
8 | -; EXPLANATION: | |
9 | -; Further information on MRDFITS is available at | |
10 | -; http://idlastro.gsfc.nasa.gov/mrdfits.html | |
11 | -; | |
12 | -; CALLING SEQUENCE: | |
13 | -; Result = MRDFITS( Filename/FileUnit,[Exten_no/Exten_name, Header], | |
14 | -; /FSCALE , /DSCALE , /UNSIGNED, | |
15 | -; ALIAS=strarr[2,n], /USE_COLNUM, | |
16 | -; /NO_TDIM, ROWS = [a,b,...], $ | |
17 | -; /POINTER_VAR, /FIXED_VAR, EXTNUM= | |
18 | -; RANGE=[a,b], COLUMNS=[a,b,...]), ERROR_ACTION=x, | |
19 | -; COMPRESS=comp_prog, STATUS=status, /VERSION ) | |
20 | -; | |
21 | -; INPUTS: | |
22 | -; Filename = String containing the name of the file to be read or | |
23 | -; file number of an open unit. If a unit is specified | |
24 | -; if will be left open positioned to read the next HDU. | |
25 | -; If the file name ends in .gz (or .Z on Unix systems) | |
26 | -; the file will be dynamically decompressed. | |
27 | -; FiluUnit = An integer file unit which has already been | |
28 | -; opened for input. Data will be read from this | |
29 | -; unit and the unit will be left pointing immediately | |
30 | -; after the HDU that is read. Thus to read a compressed | |
31 | -; file with many HDU's a user might do something like: | |
32 | -; lun=fxposit(filename, 3) ; Skip the first three HDU's | |
33 | -; repeat begin | |
34 | -; thisHDU = mrdfits(lun, 0, hdr, status=status) | |
35 | -; ... process the HDU ... | |
36 | -; endrep until status lt 0 | |
37 | -; | |
38 | -; Exten_no= Extension number to be read, 0 for primary array. | |
39 | -; Assumed 0 if not specified. | |
40 | -; If a unit rather than a filename | |
41 | -; is specified in the first argument, this is | |
42 | -; the number of HDU's to skip from the current position. | |
43 | -; Exten_name - Name of the extension to read (as stored in the EXTNAME | |
44 | -; keyword). This is a slightly slower method then specifying | |
45 | -; the extension number. | |
46 | -; OUTPUTS: | |
47 | -; Result = FITS data array or structure constructed from | |
48 | -; the designated extension. The format of result depends | |
49 | -; upon the type of FITS data read. | |
50 | -; Non-group primary array or IMAGE extension: | |
51 | -; A simple multidimensional array is returned with the | |
52 | -; dimensions given in the NAXISn keywords. | |
53 | -; Grouped image data with PCOUNT=0. | |
54 | -; As above but with GCOUNT treated as NAXIS(n+1). | |
55 | -; Grouped image data with PCOUNT>0. | |
56 | -; The data is returned as an array of structures. Each | |
57 | -; structure has two elements. The first is a one-dimensional | |
58 | -; array of the group parameters, the second is a multidimensional | |
59 | -; array as given by the NAXIS2-n keywords. | |
60 | -; ASCII and BINARY tables. | |
61 | -; The data is returned as a structure with one column for | |
62 | -; each field in the table. The names of the columns are | |
63 | -; normally taken from the TTYPE keywords (but see USE_COLNUM). | |
64 | -; Bit field columns | |
65 | -; are stored in byte arrays of the minimum necessary | |
66 | -; length. Spaces and invalid characters are replaced by | |
67 | -; underscores, and other invalid tag names are converted using | |
68 | -; the IDL_VALIDNAME(/CONVERT_ALL) function. | |
69 | -; Columns specified as variable length columns are stored | |
70 | -; with a dimension equal to the largest actual dimension | |
71 | -; used. Extra values in rows are filled with 0's or blanks. | |
72 | -; If the size of the variable length column is not | |
73 | -; a constant, then an additional column is created giving the | |
74 | -; size used in the current row. This additional column will | |
75 | -; have a tag name of the form L#_"colname" where # is the column | |
76 | -; number and colname is the column name of the variable length | |
77 | -; column. If the length of each element of a variable length | |
78 | -; column is 0 then the column is deleted. | |
79 | -; | |
80 | -; | |
81 | -; OPTIONAL OUTPUT: | |
82 | -; Header = String array containing the header from the FITS extension. | |
83 | -; | |
84 | -; OPTIONAL INPUT KEYWORDS: | |
85 | -; ALIAS The keyword allows the user to specify the column names | |
86 | -; to be created when reading FITS data. The value of | |
87 | -; this keyword should be a 2xn string array. The first | |
88 | -; value of each pair of strings should be the desired | |
89 | -; tag name for the IDL column. The second should be | |
90 | -; the FITS TTYPE value. Note that there are restrictions | |
91 | -; on valid tag names. The order of the ALIAS keyword | |
92 | -; is compatible with MWRFITS. | |
93 | -; COLUMNS - This keyword allows the user to specify that only a | |
94 | -; subset of columns is to be returned. The columns | |
95 | -; may be specified either as number 1,... n or by | |
96 | -; name or some combination of these two. | |
97 | -; If USE_COLNUM is specified names should be C1,...Cn. | |
98 | -; The use of this keyword will not save time or internal | |
99 | -; memory since the extraction of specified columns | |
100 | -; is done after all columns have been retrieved from the | |
101 | -; FITS file. | |
102 | -; COMPRESS - This keyword allows the user to specify a | |
103 | -; decompression program to use to decompress a file that | |
104 | -; will not be automatically recognized based upon | |
105 | -; the file name. | |
106 | -; /DSCALE - As with FSCALE except that the resulting data is | |
107 | -; stored in doubles. | |
108 | -; ERROR_ACTION - Set the on_error action to this value (defaults | |
109 | -; to 2). | |
110 | -; /FIXED_VAR- Translate variable length columns into fixed length columns | |
111 | -; and provide a length column for truly varying columns. | |
112 | -; This was only behavior prior to V2.5 for MRDFITS and remains | |
113 | -; the default (see /POINTER_VAR) | |
114 | -; /FSCALE - If present and non-zero then scale data to float | |
115 | -; numbers for arrays and columns which have either | |
116 | -; non-zero offset or non-unity scale. | |
117 | -; If scaling parameters are applied, then the corresponding | |
118 | -; FITS scaling keywords will be modified. | |
119 | -; NO_TDIM - Disable processing of TDIM keywords. If NO_TDIM | |
120 | -; is specified MRDFITS will ignore TDIM keywords in | |
121 | -; binary tables. | |
122 | -; /POINTER_VAR- Use pointer arrays for variable length columns. | |
123 | -; In addition to changing the format in which | |
124 | -; variable length arrays are stored, if the pointer_var | |
125 | -; keyword is set to any value other than 1 this also disables | |
126 | -; the deletion of variable length columns. (See /FIXED_VAR) | |
127 | -; Note that because pointers may be present in the output | |
128 | -; structure, the user is responsible for memory management | |
129 | -; when deleting or reassigning the structure (e.g. use HEAP_FREE | |
130 | -; first). | |
131 | -; RANGE - A scalar or two element vector giving the start | |
132 | -; and end rows to be retrieved. For ASCII and BINARY | |
133 | -; tables this specifies the row number. For GROUPed data | |
134 | -; this will specify the groups. For array images, this | |
135 | -; refers to the last non-unity index in the array. E.g., | |
136 | -; for a 3 D image with NAXIS* values = [100,100,1], the | |
137 | -; range may be specified as 0:99, since the last axis | |
138 | -; is suppressed. Note that the range uses IDL indexing | |
139 | -; So that the first row is row 0. | |
140 | -; If only a single value, x, is given in the range, | |
141 | -; the range is assumed to be [0,x-1]. | |
142 | -; ROWS - A scalar or vector specifying a specific row or rows to read | |
143 | -; (first row is 0). For example to read rows 0, | |
144 | -; 12 and 23 only, set ROWS=[0,12,23]. Valid for images, ASCII | |
145 | -; and binary tables, but not GROUPed data. For images | |
146 | -; the row numbers refer to the last non-unity index in the array. | |
147 | -; Cannot be used at the same time as the RANGE keyword | |
148 | -; /SILENT - Suppress informative messages. | |
149 | -; STRUCTYP - The structyp keyword specifies the name to be used | |
150 | -; for the structure defined when reading ASCII or binary | |
151 | -; tables. Generally users will not be able to conveniently | |
152 | -; combine data from multiple files unless the STRUCTYP | |
153 | -; parameter is specified. An error will occur if the | |
154 | -; user specifies the same value for the STRUCTYP keyword | |
155 | -; in calls to MRDFITS in the same IDL session for extensions | |
156 | -; which have different structures. | |
157 | -; /UNSIGNED - For integer data with appropriate zero points and scales | |
158 | -; read the data into unsigned integer arrays. | |
159 | -; /USE_COLNUM - When creating column names for binary and ASCII tables | |
160 | -; MRDFITS attempts to use the appropriate TTYPE keyword | |
161 | -; values. If USE_COLNUM is specified and non-zero then | |
162 | -; column names will be generated as 'C1, C2, ... 'Cn' | |
163 | -; for the number of columns in the table. | |
164 | -; /VERSION Print the current version number | |
165 | -; | |
166 | -; OPTIONAL OUTPUT KEYWORDS: | |
167 | -; EXTNUM - the number of the extension actually read. Useful if the | |
168 | -; user specified the extension by name. | |
169 | -; STATUS - A integer status indicating success or failure of | |
170 | -; the request. A status of >=0 indicates a successful read. | |
171 | -; Currently | |
172 | -; 0 -> successful completion | |
173 | -; -1 -> error | |
174 | -; -2 -> end of file | |
175 | -; | |
176 | -; EXAMPLES: | |
177 | -; (1) Read a FITS primary array: | |
178 | -; a = mrdfits('TEST.FITS') or | |
179 | -; a = mrdfits('TEST.FITS', 0, header) | |
180 | -; The second example also retrieves header information. | |
181 | -; | |
182 | -; (2) Read rows 10-100 of the second extension of a FITS file. | |
183 | -; a = mrdfits('TEST.FITS', 2, header, range=[10,100]) | |
184 | -; | |
185 | -; (3) Read a table and ask that any scalings be applied and the | |
186 | -; scaled data be converted to doubles. Use simple column names, | |
187 | -; suppress outputs. | |
188 | -; a = mrdfits('TEST.FITS', 1, /dscale, /use_colnum, /silent) | |
189 | -; | |
190 | -; (4) Read rows 3, 34 and 52 of a binary table and request that | |
191 | -; variable length columns be stored as a pointer variable in the | |
192 | -; output structure | |
193 | -; a = mrdfits('TEST.FITS',1,rows=[3,34,52],/POINTER) | |
194 | - | |
195 | -; RESTRICTIONS: | |
196 | -; (1) Cannot handle data in non-standard FITS formats. | |
197 | -; (2) Doesn't do anything with BLANK or NULL values or | |
198 | -; NaN's. They are just read in. They may be scaled | |
199 | -; if scaling is applied. | |
200 | -; NOTES: | |
201 | -; This multiple format FITS reader is designed to provide a | |
202 | -; single, simple interface to reading all common types of FITS data. | |
203 | -; MRDFITS DOES NOT scale data by default. The FSCALE or DSCALE | |
204 | -; parameters must be used. | |
205 | -; | |
206 | -; MRDFITS support 64 bit integer data types, which are tentatively | |
207 | -; included in the FITS standard. | |
208 | -; http://fits.gsfc.nasa.gov/fits_64bit.html | |
209 | -; | |
210 | -; | |
211 | -; PROCEDURES USED: | |
212 | -; The following procedures are contained in the main MRDFITS program. | |
213 | -; MRD_IMAGE -- Generate array/structure for images. | |
214 | -; MRD_READ_IMAGE -- Read image data. | |
215 | -; MRD_ASCII -- Generate structure for ASCII tables. | |
216 | -; MRD_READ_ASCII -- Read an ASCII table. | |
217 | -; MRD_TABLE -- Generate structure for Binary tables. | |
218 | -; MRD_READ_TABLE -- Read binary table info. | |
219 | -; MRD_READ_HEAP -- Read variable length record info. | |
220 | -; MRD_SCALE -- Apply scaling to data. | |
221 | -; MRD_COLUMNS -- Extract columns. | |
222 | -; | |
223 | -; Other ASTRON Library routines used | |
224 | -; FXPAR(), FXADDPAR, FXPOSIT, FXMOVE(), MRD_STRUCT(), MRD_SKIP, | |
225 | -; | |
226 | -; MODIfICATION HISTORY: | |
227 | -; V1.0 November 9, 1994 ---- Initial release. | |
228 | -; Creator: Thomas A. McGlynn | |
229 | -; V1.1 January 20, 1995 T.A. McGlynn | |
230 | -; Fixed bug in variable length records. | |
231 | -; Added TDIM support -- new routine mrd_tdim in MRD_TABLE. | |
232 | -; V1.2 | |
233 | -; Added support for dynamic decompression of files. | |
234 | -; Fixed further bugs in variable length record handling. | |
235 | -; V1.2a | |
236 | -; Added NO_TDIM keyword to turn off TDIM processing for | |
237 | -; those who don't want it. | |
238 | -; Bug fixes: Handle one row tables correctly, use BZERO rather than | |
239 | -; BOFFSET. Fix error in scaling of images. | |
240 | -; V1.2b | |
241 | -; Changed MRD_HREAD to handle null characters in headers. | |
242 | -; V2.0 April 1, 1996 | |
243 | -; -Handles FITS tables with an arbitrary number of columns. | |
244 | -; -Substantial changes to MRD_STRUCT to allow the use of | |
245 | -; substructures when more than 127 columns are desired. | |
246 | -; -All references to table columns are now made through the | |
247 | -; functions MRD_GETC and MRD_PUTC. See description above. | |
248 | -; -Use of SILENT will now eliminate compilation messages for | |
249 | -; temporary functions. | |
250 | -; -Bugs in handling of variable length columns with either | |
251 | -; a single row in the table or a maximum of a single element | |
252 | -; in the column fixed. | |
253 | -; -Added support for DCOMPLEX numbers in binary tables (M formats) for | |
254 | -; IDL versions above 4.0. | |
255 | -; -Created regression test procedure to check in new versions. | |
256 | -; -Added error_action parameter to allow user to specify | |
257 | -; on_error action. This should allow better interaction with | |
258 | -; new CHECK facility. ON_ERROR statements deleted from | |
259 | -; most called routines. | |
260 | -; - Modified MRDFITS to read in headers containing null characters | |
261 | -; with a warning message printed. | |
262 | -; V2.0a April 16, 1996 | |
263 | -; - Added IS_IEEE_BIG() checks (and routine) so that we don't | |
264 | -; worry about IEEE to host conversions if the machine's native | |
265 | -; format is IEEE Big-endian. | |
266 | -; V2.1 August 24, 1996 | |
267 | -; - Use resolve_routine for dynamically defined functions | |
268 | -; for versions > 4.0 | |
269 | -; - Fix some processing in random groups format. | |
270 | -; - Handle cases where the data segment is--legally--null. | |
271 | -; In this case MRDFITS returns a scalar 0. | |
272 | -; - Fix bugs with the values for BSCALE and BZERO (and PSCAL and | |
273 | -; PZERO) parameters set by MRDFITS. | |
274 | -; V2.1a April 24, 1997 Handle binary tables with zero length columns | |
275 | -; V2.1b May 13,1997 Remove whitespace from replicate structure definition | |
276 | -; V2.1c May 28,1997 Less strict parsing of XTENSION keyword | |
277 | -; V2.1d June 16, 1997 Fixed problem for >32767 entries introduced 24-Apr | |
278 | -; V2.1e Aug 12, 1997 Fixed problem handling double complex arrays | |
279 | -; V2.1f Oct 22, 1997 IDL reserved words can't be structure tag names | |
280 | -; V2.1g Nov 24, 1997 Handle XTENSION keywords with extra blanks. | |
281 | -; V2.1h Jul 26, 1998 More flexible parsing of TFORM characters | |
282 | -; V2.2 Dec 14, 1998 Allow fields with longer names for | |
283 | -; later versions of IDL. | |
284 | -; Fix handling of arrays in scaling routines. | |
285 | -; Allow >128 fields in structures for IDL >4.0 | |
286 | -; Use more efficient structure copying for | |
287 | -; IDL>5.0 | |
288 | -; V2.2b June 17, 1999 Fix bug in handling case where | |
289 | -; all variable length columns are deleted | |
290 | -; because they are empty. | |
291 | -; V2.3 March 7, 2000 Allow user to supply file handle rather | |
292 | -; than file name. | |
293 | -; Added status field. | |
294 | -; Now needs FXMOVE routine | |
295 | -; V2.3b April 4, 2000 | |
296 | -; Added compress option (from D. Palmer) | |
297 | -; V2.4 July 4, 2000 Added STATUS=-1 for "File access error" (Zarro/GSFC) | |
298 | -; V2.4a May 2, 2001 Trim binary format string (W. Landsman) | |
299 | -; V2.5 December 5, 2001 Add unsigned, alias, 64 bit integers. version, $ | |
300 | -; /pointer_val, /fixed_var. | |
301 | -; V2.5a Fix problem when both the first and the last character | |
302 | -; in a TTYPEnn value are invalid structure tag characters | |
303 | -; V2.6 February 15, 2002 Fix error in handling unsigned numbers, $ | |
304 | -; and 64 bit unsigneds. (Thanks to Stephane Beland) | |
305 | -; V2.6a September 2, 2002 Fix possible conflicting data structure for | |
306 | -; variable length arrays (W. Landsman) | |
307 | -; V2.7 July, 2003 Added Rows keyword (W. Landsman) | |
308 | -; V2.7a September 2003 Convert dimensions to long64 to handle huge files | |
309 | -; V2.8 October 2003 Use IDL_VALIDNAME() function to ensure valid tag names | |
310 | -; Removed OLD_STRUCT and TEMPDIR keywords W. Landsman | |
311 | -; V2.9 February 2004 Added internal MRD_FXPAR procedure for faster | |
312 | -; processing of binary table headers E. Sheldon | |
313 | -; V2.9a March 2004 Restore ability to read empty binary table W. Landsman | |
314 | -; Swallow binary tables with more columns than given in TFIELDS | |
315 | -; V2.9b Fix to ensure order of TFORMn doesn't matter | |
316 | -; V2.9c Check if extra degenerate NAXISn keyword are present W.L. Oct 2004 | |
317 | -; V2.9d Propagate /SILENT to MRD_HREAD, more LONG64 casting W. L. Dec 2004 | |
318 | -; V2.9e Add typarr[good] to fix a problem reading zero-length columns | |
319 | -; A.Csillaghy, csillag@ssl.berkeley.edu (RHESSI) | |
320 | -; V2.9f Fix problem with string variable binary tables, possible math | |
321 | -; overflow on non-IEEE machines WL Feb. 2005 | |
322 | -; V2.9g Fix problem when setting /USE_COLNUM WL Feb. 2005 | |
323 | -; V2.10 Use faster keywords to BYTEORDER WL May 2006 | |
324 | -; V2.11 Add ON_IOERROR, CATCH, and STATUS keyword to MRD_READ_IMAGE to | |
325 | -; trap EOF in compressed files DZ Also fix handling of unsigned | |
326 | -; images when BSCALE not present K Chu/WL June 2006 | |
327 | -; V2.12 Allow extension to be specified by name, added EXTNUM keyword | |
328 | -; WL December 2006 | |
329 | -; V2.12a Convert ASCII table column to DOUBLE if single precision is | |
330 | -; insufficient | |
331 | -; V2.12b Fixed problem when both /fscale and /unsigned are set | |
332 | -; C. Markwardt Aug 2007 | |
333 | -; V2.13 Use SWAP_ENDIAN_INPLACE instead of IEEE_TO_HOST and IS_IEEE_BIG | |
334 | -; W. Landsman Nov 2007 | |
335 | -; V2.13a One element vector allowed for file name W.L. Dec 2007 | |
336 | -;- | |
337 | -PRO mrd_fxpar, hdr, xten, nfld, nrow, rsize, fnames, fforms, scales, offsets | |
338 | -; | |
339 | -; Check for valid header. Check header for proper attributes. | |
340 | -; | |
341 | - S = SIZE(HDR) | |
342 | - IF ( S[0] NE 1 ) OR ( S[2] NE 7 ) THEN $ | |
343 | - MESSAGE,'FITS Header (first parameter) must be a string array' | |
344 | - | |
345 | - xten = fxpar(hdr, 'XTENSION') | |
346 | - nfld = fxpar(hdr, 'TFIELDS') | |
347 | - nrow = long64(fxpar(hdr, 'NAXIS2')) | |
348 | - rsize = long64(fxpar(hdr, 'NAXIS1')) | |
349 | - | |
350 | - ;; will extract these for each | |
351 | - names = ['TTYPE','TFORM', 'TSCAL', 'TZERO'] | |
352 | - nnames = n_elements(names) | |
353 | - | |
354 | -; Start by looking for the required TFORM keywords. Then try to extract it | |
355 | -; along with names (TTYPE), scales (TSCAL), and offsets (TZERO) | |
356 | - | |
357 | - keyword = STRMID( hdr, 0, 8) | |
358 | - | |
359 | -; | |
360 | -; Find all instances of 'TFORM' followed by | |
361 | -; a number. Store the positions of the located keywords in mforms, and the | |
362 | -; value of the number field in n_mforms | |
363 | -; | |
364 | - | |
365 | - mforms = WHERE(STRPOS(keyword,'TFORM') GE 0, n_mforms) | |
366 | - if n_mforms GT nfld then begin | |
367 | - message,/CON, $ | |
368 | - 'WARNING - More columns found in binary table than specified in TFIELDS' | |
369 | - n_mforms = nfld | |
370 | - mforms = mforms[0:nfld-1] | |
371 | - endif | |
372 | - | |
373 | - | |
374 | - IF ( n_mforms GT 0 ) THEN BEGIN | |
375 | - numst= STRMID(hdr[mforms], 5 ,3) | |
376 | - number = INTARR(n_mforms)-1 | |
377 | - | |
378 | - FOR i = 0, n_mforms-1 DO $ | |
379 | - IF VALID_NUM( numst[i], num) THEN number[i] = num | |
380 | - | |
381 | - igood = WHERE(number GE 0, n_mforms) | |
382 | - IF n_mforms GT 0 THEN BEGIN | |
383 | - mforms = mforms[igood] | |
384 | - number = number[igood] | |
385 | - numst = numst[igood] | |
386 | - ENDIF | |
387 | - | |
388 | - ENDIF ELSE RETURN ;No fields in binary table | |
389 | - | |
390 | - ;; The others | |
391 | - fnames = strarr(n_mforms) | |
392 | - fforms = strarr(n_mforms) | |
393 | - scales = dblarr(n_mforms) | |
394 | - offsets = dblarr(n_mforms) | |
395 | - | |
396 | - ;;comments = strarr(n_mnames) | |
397 | - | |
398 | - fnames_names = 'TTYPE'+numst | |
399 | - scales_names = 'TSCAL'+numst | |
400 | - offsets_names = 'TZERO'+numst | |
401 | - number = number -1 ;Make zero-based | |
402 | - | |
403 | - | |
404 | - match, keyword, fnames_names, mkey_names, mnames, count = N_mnames | |
405 | - | |
406 | - match, keyword, scales_names, mkey_scales, mscales, count = N_mscales | |
407 | - | |
408 | - match, keyword, offsets_names, mkey_offsets, moffsets,count = N_moffsets | |
409 | - | |
410 | - FOR in=0L, nnames-1 DO BEGIN | |
411 | - | |
412 | - CASE names[in] OF | |
413 | - 'TTYPE': BEGIN | |
414 | - tmatches = mnames | |
415 | - matches = mkey_names | |
416 | - nmatches = n_mnames | |
417 | - result = fnames | |
418 | - END | |
419 | - 'TFORM': BEGIN | |
420 | - tmatches = lindgen(n_mforms) | |
421 | - matches = mforms | |
422 | - nmatches = n_mforms | |
423 | - result = fforms | |
424 | - END | |
425 | - 'TSCAL': BEGIN | |
426 | - tmatches = mscales | |
427 | - matches = mkey_scales | |
428 | - nmatches = n_mscales | |
429 | - result = scales | |
430 | - END | |
431 | - 'TZERO': BEGIN | |
432 | - tmatches = moffsets | |
433 | - matches = mkey_offsets | |
434 | - nmatches = n_moffsets | |
435 | - result = offsets | |
436 | - END | |
437 | - ELSE: message,'What?' | |
438 | - ENDCASE | |
439 | - | |
440 | - ;;help,matches,nmatches | |
441 | - | |
442 | -; | |
443 | -; Extract the parameter field from the specified header lines. If one of the | |
444 | -; special cases, then done. | |
445 | -; | |
446 | - IF nmatches GT 0 THEN BEGIN | |
447 | - | |
448 | - ;; "matches" is a subscript for hdr and keyword. | |
449 | - ;; get just the matches in line | |
450 | - | |
451 | - line = hdr[matches] | |
452 | - svalue = STRTRIM( STRMID(line,9,71),2) | |
453 | - | |
454 | - FOR i = 0, nmatches-1 DO BEGIN | |
455 | - IF ( STRMID(svalue[i],0,1) EQ "'" ) THEN BEGIN | |
456 | - | |
457 | - ;; Its a string | |
458 | - test = STRMID( svalue[i],1,STRLEN( svalue[i] )-1) | |
459 | - next_char = 0 | |
460 | - off = 0 | |
461 | - value = '' | |
462 | -; | |
463 | -; Find the next apostrophe. | |
464 | -; | |
465 | -NEXT_APOST: | |
466 | - endap = STRPOS(test, "'", next_char) | |
467 | - IF endap LT 0 THEN MESSAGE, $ | |
468 | - 'WARNING: Value of '+nam+' invalid in '+ " (no trailing ')", /info | |
469 | - value = value + STRMID( test, next_char, endap-next_char ) | |
470 | -; | |
471 | -; Test to see if the next character is also an apostrophe. If so, then the | |
472 | -; string isn't completed yet. Apostrophes in the text string are signalled as | |
473 | -; two apostrophes in a row. | |
474 | -; | |
475 | - IF STRMID( test, endap+1, 1) EQ "'" THEN BEGIN | |
476 | - value = value + "'" | |
477 | - next_char = endap+2 | |
478 | - GOTO, NEXT_APOST | |
479 | - ENDIF | |
480 | - | |
481 | -; | |
482 | -; CM 19 Sep 1997 | |
483 | -; This is a string that could be continued on the next line. Check this | |
484 | -; possibility with the following four criteria: *1) Ends with '&' | |
485 | -; (2) Next line is CONTINUE (3) LONGSTRN keyword is present (recursive call to | |
486 | -; FXPAR) 4. /NOCONTINE is not set | |
487 | - | |
488 | -; | |
489 | -; If not a string, then separate the parameter field from the comment field. | |
490 | -; | |
491 | - ENDIF ELSE BEGIN | |
492 | - ;; not a string | |
493 | - test = svalue[I] | |
494 | - slash = STRPOS(test, "/") | |
495 | - IF slash GT 0 THEN BEGIN | |
496 | - test = STRMID(test, 0, slash) | |
497 | - END | |
498 | -; | |
499 | -; Find the first word in TEST. Is it a logical value ('T' or 'F')? | |
500 | -; | |
501 | - test2 = test | |
502 | - value = GETTOK(test2,' ') | |
503 | - test2 = STRTRIM(test2,2) | |
504 | - IF ( value EQ 'T' ) THEN BEGIN | |
505 | - value = 1 | |
506 | - END ELSE IF ( value EQ 'F' ) THEN BEGIN | |
507 | - value = 0 | |
508 | - END ELSE BEGIN | |
509 | -; | |
510 | -; Test to see if a complex number. It's a complex number if the value and the | |
511 | -; next word, if any, both are valid numbers. | |
512 | -; | |
513 | - IF STRLEN(test2) EQ 0 THEN GOTO, NOT_COMPLEX | |
514 | - test2 = GETTOK(test2,' ') | |
515 | - IF VALID_NUM(value,val1) AND VALID_NUM(value2,val2) $ | |
516 | - THEN BEGIN | |
517 | - value = COMPLEX(val1,val2) | |
518 | - GOTO, GOT_VALUE | |
519 | - ENDIF | |
520 | -; | |
521 | -; Not a complex number. Decide if it is a floating point, double precision, | |
522 | -; or integer number. If an error occurs, then a string value is returned. | |
523 | -; If the integer is not within the range of a valid long value, then it will | |
524 | -; be converted to a double. | |
525 | -; | |
526 | -NOT_COMPLEX: | |
527 | - ON_IOERROR, GOT_VALUE | |
528 | - value = test | |
529 | - IF NOT VALID_NUM(value) THEN GOTO, GOT_VALUE | |
530 | - | |
531 | - IF (STRPOS(value,'.') GE 0) OR (STRPOS(value,'E') $ | |
532 | - GE 0) OR (STRPOS(value,'D') GE 0) THEN BEGIN | |
533 | - IF ( STRPOS(value,'D') GT 0 ) OR $ | |
534 | - ( STRLEN(value) GE 8 ) THEN BEGIN | |
535 | - value = DOUBLE(value) | |
536 | - END ELSE value = FLOAT(value) | |
537 | - ENDIF ELSE BEGIN | |
538 | - lmax = 2.0D^31 - 1.0D | |
539 | - lmin = -2.0D31 | |
540 | - value = DOUBLE(value) | |
541 | - if (value GE lmin) and (value LE lmax) THEN $ | |
542 | - value = LONG(value) | |
543 | - ENDELSE | |
544 | - | |
545 | -; | |
546 | -GOT_VALUE: | |
547 | - ON_IOERROR, NULL | |
548 | - ENDELSE | |
549 | - ENDELSE ; if string | |
550 | -; | |
551 | -; Add to vector if required. | |
552 | -; | |
553 | - | |
554 | - result[tmatches[i]] = value | |
555 | - | |
556 | - ENDFOR | |
557 | - | |
558 | - CASE names[in] OF | |
559 | - 'TTYPE': fnames[number] = strtrim(result, 2) | |
560 | - 'TFORM': fforms[number] = strtrim(result, 2) | |
561 | - 'TSCAL': scales[number] = result | |
562 | - 'TZERO': offsets[number] = result | |
563 | - ELSE: message,'What?' | |
564 | - ENDCASE | |
565 | - | |
566 | -; | |
567 | -; Error point for keyword not found. | |
568 | -; | |
569 | - ENDIF | |
570 | -; | |
571 | - | |
572 | - | |
573 | - | |
574 | - ENDFOR | |
575 | -END | |
576 | - | |
577 | - | |
578 | -; Get a tag name give the column name and index | |
579 | -function mrd_dofn, name, index, use_colnum, alias=alias | |
580 | - | |
581 | - ; Check if the user has specified an alias. | |
582 | - | |
583 | - if n_elements(name) eq 0 then name = 'C'+strtrim(index, 2) | |
584 | - name = strtrim(name) | |
585 | - if keyword_set(alias) then begin | |
586 | - sz = size(alias) | |
587 | - | |
588 | - if (sz[0] eq 1 or sz[0] eq 2) and sz[1] eq 2 and sz[sz[0]+1] eq 7 then begin | |
589 | - w=where(name eq alias[1,*]) | |
590 | - if (w[0] ne -1) then begin | |
591 | - name = alias[0,w[0]]; | |
592 | - endif | |
593 | - endif | |
594 | - endif | |
595 | - ; Convert the string name to a valid variable name. If name | |
596 | - ; is not defined generate the string Cnn when nn is the index | |
597 | - ; number. | |
598 | - | |
599 | - table = 0 | |
600 | - sz = size(name) | |
601 | - nsz = n_elements(sz) | |
602 | - if not use_colnum and (sz[nsz-2] ne 0) then begin | |
603 | - if sz[nsz-2] eq 7 then begin | |
604 | - str = name[0] | |
605 | - endif else begin | |
606 | - str = 'C'+strtrim(index,2) | |
607 | - endelse | |
608 | - endif else begin | |
609 | - str = 'C'+strtrim(index,2) | |
610 | - endelse | |
611 | - | |
612 | - return, IDL_VALIDNAME(str,/CONVERT_ALL) | |
613 | - | |
614 | -end | |
615 | - | |
616 | -;*************************************************************** | |
617 | - | |
618 | - | |
619 | - | |
620 | -; Parse the TFORM keyword and return the type and dimension of the | |
621 | -; data. | |
622 | -pro mrd_doff, form, dim, type | |
623 | - | |
624 | - ; Find the first non-numeric character. | |
625 | - | |
626 | - len = strlen(form) | |
627 | - | |
628 | - if len le 0 then return | |
629 | - | |
630 | - for i=0, len-1 do begin | |
631 | - | |
632 | - c = strmid(form, i, 1) | |
633 | - if c lt '0' or c gt '9' then goto, not_number | |
634 | - | |
635 | - endfor | |
636 | - | |
637 | - not_number: | |
638 | - | |
639 | - if i ge len then return ;Modified from len-1 on 26-Jul-1998 | |
640 | - | |
641 | - if i gt 0 then begin | |
642 | - dim = long(strmid(form, 0, i)) | |
643 | - if dim EQ 0l then dim = -1l | |
644 | - endif else begin | |
645 | - dim = 0 | |
646 | - endelse | |
647 | - | |
648 | - type = strmid(form, i, 1) | |
649 | -end | |
650 | - | |
651 | - | |
652 | - | |
653 | -;********************************************************************* | |
654 | - | |
655 | -; Check that this name is unique with regard to other column names. | |
656 | - | |
657 | -function mrd_chkfn, name, namelist, index | |
658 | - | |
659 | - ; | |
660 | - ; | |
661 | - | |
662 | - maxlen = 127 | |
663 | - | |
664 | - if strlen(name) gt maxlen then name = strmid(name, 0, maxlen) | |
665 | - w = where(name eq strmid(namelist, 0, maxlen) ) | |
666 | - if w[0] ne -1 then begin | |
667 | - ; We have found a name conflict. | |
668 | - ; | |
669 | - name = 'gen$name_'+strcompress(string(index+1),/remove_all) | |
670 | - endif | |
671 | - | |
672 | - return, name | |
673 | - | |
674 | -end | |
675 | - | |
676 | -; Find the appropriate offset for a given unsigned type. | |
677 | -; The type may be given as the bitpix value or the IDL | |
678 | -; variable type. | |
679 | - | |
680 | -function mrd_unsigned_offset, type | |
681 | - | |
682 | - if (type eq 12 or type eq 16) then begin | |
683 | - return, uint(32768) | |
684 | - endif else if (type eq 13 or type eq 32) then begin | |
685 | - return, ulong('2147483648') | |
686 | - endif else if (type eq 15 or type eq 64) then begin | |
687 | - return, ulong64('9223372036854775808'); | |
688 | - endif | |
689 | - return, 0 | |
690 | -end | |
691 | - | |
692 | - | |
693 | - | |
694 | -; Can we treat this data as unsigned? | |
695 | - | |
696 | -function mrd_chkunsigned, bitpix, scale, zero, unsigned=unsigned | |
697 | - | |
698 | - if not keyword_set(unsigned) then return, 0 | |
699 | - | |
700 | - ; This is correct but we should note that | |
701 | - ; FXPAR returns a double rather than a long. | |
702 | - ; Since the offset is a power of two | |
703 | - ; it is an integer that is exactly representable | |
704 | - ; as a double. However, if a user were to use | |
705 | - ; 64 bit integers and an offset close to but not | |
706 | - ; equal to 2^63, we would erroneously assume that | |
707 | - ; the dataset was unsigned... | |
708 | - | |
709 | - | |
710 | - if scale eq 1 then begin | |
711 | - if (bitpix eq 16 and zero eq 32768L) or $ | |
712 | - (bitpix eq 32 and zero eq ulong('2147483648')) or $ | |
713 | - (bitpix eq 64 and zero eq ulong64('9223372036854775808')) then begin | |
714 | - return, 1 | |
715 | - endif | |
716 | - endif | |
717 | - return, 0 | |
718 | -end | |
719 | - | |
720 | -; Is this one of the IDL unsigned types? | |
721 | -function mrd_unsignedtype, data | |
722 | - | |
723 | - type = size(data,/ type) | |
724 | - if (type eq 12) or (type eq 13) or (type eq 15) then return, type $ | |
725 | - else return, 0 | |
726 | - | |
727 | -end | |
728 | - | |
729 | -; Return the currrent version string for MRDFITS | |
730 | -function mrd_version | |
731 | - return, '2.13a' | |
732 | -end | |
733 | -;===================================================================== | |
734 | -; END OF GENERAL UTILITY FUNCTIONS =================================== | |
735 | -;===================================================================== | |
736 | - | |
737 | - | |
738 | -; Parse the TFORM keyword and return the type and dimension of the | |
739 | -; data. | |
740 | -pro mrd_atype, form, type, slen | |
741 | - | |
742 | - | |
743 | - ; Find the first non-numeric character. | |
744 | - | |
745 | - | |
746 | - ; Get rid of blanks. | |
747 | - form = strcompress(form,/remove_all) | |
748 | - len = strlen(form) | |
749 | - if len le 0 then return | |
750 | - | |
751 | - type = strmid(form, 0,1) | |
752 | - length = strmid(form,1,len-1) | |
753 | - ; | |
754 | - ; Ignore the number of decimal places. We assume that there | |
755 | - ; is a decimal point. | |
756 | - ; | |
757 | - p = strpos(length, '.') | |
758 | - if p gt 0 then length = strmid(length,0,p) | |
759 | - | |
760 | - if strlen(length) gt 0 then slen = fix(length) else slen = 1 | |
761 | - if (type EQ 'F') or (type EQ 'E') then $ ;Updated April 2007 | |
762 | - if (slen GE 8) then type = 'D' | |
763 | - | |
764 | -end | |
765 | - | |
766 | - | |
767 | -; Read in the table information. | |
768 | -pro mrd_read_ascii, unit, range, nbytes, nrows, nfld, typarr, posarr, $ | |
769 | - lenarr, nullarr, table, old_struct=old_struct, rows=rows | |
770 | - | |
771 | - ; | |
772 | - ; Unit Unit to read data from. | |
773 | - ; Range Range of to be read | |
774 | - ; Nbytes Number of bytes per row. | |
775 | - ; Nrows Number of rows. | |
776 | - ; Nfld Number of fields in structure. | |
777 | - ; Typarr Array indicating type of variable. | |
778 | - ; Posarr Starting position of fields (first char at 0) | |
779 | - ; Lenarr Length of fields | |
780 | - ; Nullarr Array of null values | |
781 | - ; Table Table to read information into. | |
782 | - ; Old_struct Should recursive structure format be used? | |
783 | - | |
784 | - bigstr = bytarr(nbytes, range[1]-range[0]+1) | |
785 | - | |
786 | - if range[0] gt 0 then mrd_skip, unit, nbytes*range[0] | |
787 | - readu,unit, bigstr | |
788 | - if N_elements(rows) GT 0 then bigstr = bigstr[*,rows-range[0]] | |
789 | - | |
790 | - ; Skip to the end of the data area. | |
791 | - | |
792 | - nSkipRow = nrows - range[1] - 1 | |
793 | - nskipB = 2880 - (nbytes*nrows) mod 2880 | |
794 | - if nskipB eq 2880 then nskipB = 0 | |
795 | - | |
796 | - mrd_skip, unit, nskipRow*nbytes+nskipB | |
797 | - | |
798 | - s1 = posarr-1 | |
799 | - s2 = s1 + lenarr - 1 | |
800 | - for i=0, nfld-1 do begin | |
801 | - | |
802 | - flds = strtrim( bigstr[s1[i]:s2[i],* ] ) | |
803 | - | |
804 | - if strtrim(nullarr[i]) ne '' then begin | |
805 | - | |
806 | - curr_col = table.(i) | |
807 | - | |
808 | - w = where(flds ne strtrim(nullarr[i])) | |
809 | - if w[0] ne -1 then begin | |
810 | - if N_elements(w) EQ 1 then w = w[0] | |
811 | - if typarr[i] eq 'I' then begin | |
812 | - curr_col[w] = long(flds[w]) | |
813 | - endif else if typarr[i] eq 'E' or typarr[i] eq 'F' then begin | |
814 | - curr_col[w] = float(flds[w]) | |
815 | - endif else if typarr[i] eq 'D' then begin | |
816 | - curr_col[w] = double(flds[w]) | |
817 | - endif else if typarr[i] eq 'A' then begin | |
818 | - curr_col[w] = flds[w] | |
819 | - endif | |
820 | - endif | |
821 | - | |
822 | - table.(i) = curr_col | |
823 | - | |
824 | - endif else begin | |
825 | - | |
826 | - | |
827 | - | |
828 | - if typarr[i] eq 'I' then begin | |
829 | - table.(i) = long(flds) | |
830 | - endif else if typarr[i] eq 'E' or typarr[i] eq 'F' then begin | |
831 | - table.(i) = float(flds) | |
832 | - endif else if typarr[i] eq 'D' then begin | |
833 | - table.(i) = double(flds) | |
834 | - endif else if typarr[i] eq 'A' then begin | |
835 | - table.(i) = flds | |
836 | - endif | |
837 | - endelse | |
838 | - endfor | |
839 | - | |
840 | -end | |
841 | - | |
842 | - | |
843 | -; Define a structure to hold a FITS ASCII table. | |
844 | -pro mrd_ascii, header, structyp, use_colnum, $ | |
845 | - range, table, $ | |
846 | - nbytes, nrows, nfld, typarr, posarr, lenarr, nullarr, $ | |
847 | - fnames, fvalues, scales, offsets, scaling, status, rows = rows, $ | |
848 | - silent=silent, columns=columns, alias=alias | |
849 | - | |
850 | - ; | |
851 | - ; Header FITS header for table. | |
852 | - ; Structyp IDL structure type to be used for | |
853 | - ; structure. | |
854 | - ; Use_colnum Use column numbers not names. | |
855 | - ; Range Range of rows of interest | |
856 | - ; Table Structure to be defined. | |
857 | - ; Nbytes Bytes per row | |
858 | - ; Nrows Number of rows in table | |
859 | - ; Nfld Number of fields | |
860 | - ; Typarr Array of field types | |
861 | - ; Posarr Array of field offsets | |
862 | - ; Lenarr Array of field lengths | |
863 | - ; Nullarr Array of field null values | |
864 | - ; Fname Column names | |
865 | - ; Fvalues Formats for columns | |
866 | - ; Scales/offsets Scaling factors for columns | |
867 | - ; Scaling Do we need to scale? | |
868 | - ; Status Return status. | |
869 | - | |
870 | - table = 0 | |
871 | - | |
872 | - types = ['I', 'E', 'F', 'D', 'A'] | |
873 | - sclstr = ['0l', '0.0', '0.0', '0.0d0', ' '] | |
874 | - status = 0 | |
875 | - | |
876 | - if strmid(fxpar(header, 'XTENSION'),0,8) ne 'TABLE ' then begin | |
877 | - print, 'MRDFITS: Header is not from ASCII table.' | |
878 | - status = -1; | |
879 | - return | |
880 | - endif | |
881 | - | |
882 | - nfld = fxpar(header, 'TFIELDS') | |
883 | - nrows = long64( fxpar(header, 'NAXIS2')) | |
884 | - nbytes = long64( fxpar(header, 'NAXIS1')) | |
885 | - | |
886 | - if range[0] ge 0 then begin | |
887 | - range[0] = range[0] < (nrows-1) | |
888 | - range[1] = range[1] < (nrows-1) | |
889 | - endif else begin | |
890 | - range[0] = 0 | |
891 | - range[1] = nrows-1 | |
892 | - endelse | |
893 | - | |
894 | - if N_elements(rows) EQ 0 then nrows = range[1] - range[0] + 1 else begin | |
895 | - bad = where(rows GT nrows, Nbad) | |
896 | - if Nbad GT 0 then begin | |
897 | - print,'MRDFITS: Row numbers must be between 0 and ' + $ | |
898 | - strtrim(nrows-1,2) | |
899 | - status = -1 | |
900 | - return | |
901 | - endif | |
902 | - nrows = N_elements(rows) | |
903 | - endelse | |
904 | - | |
905 | - if nrows le 0 then begin | |
906 | - if not keyword_set(silent) then begin | |
907 | - print,'MRDFITS: ASCII table. ',strcompress(string(nfld)), $ | |
908 | - ' columns, no rows' | |
909 | - endif | |
910 | - return | |
911 | - endif | |
912 | - | |
913 | - ; | |
914 | - ; Loop over the columns | |
915 | - | |
916 | - typarr = strarr(nfld) | |
917 | - lenarr = intarr(nfld) | |
918 | - posarr = intarr(nfld) | |
919 | - nullarr = strarr(nfld) | |
920 | - fnames = strarr(nfld) | |
921 | - fvalues = strarr(nfld) | |
922 | - scales = dblarr(nfld) | |
923 | - offsets = dblarr(nfld) | |
924 | - | |
925 | - | |
926 | - for i=0, nfld-1 do begin | |
927 | - suffix = strcompress(string(i+1), /remove_all) | |
928 | - fname = fxpar(header, 'TTYPE' + suffix, count=cnt) | |
929 | - if cnt eq 0 then xx = temporary(fname) | |
930 | - fform = fxpar(header, 'TFORM' + suffix) | |
931 | - fpos = fxpar(header, 'TBCOL' + suffix) | |
932 | - fnull = fxpar(header, 'TNULL' + suffix, count=cnt) | |
933 | - if cnt eq 0 then fnull = '' | |
934 | - scales[i] = fxpar(header, 'TSCAL' + suffix) | |
935 | - if scales[i] eq 0.0d0 then scales[i] = 1.0d0 | |
936 | - offsets[i] = fxpar(header, 'TZERO'+suffix) | |
937 | - | |
938 | - fname = mrd_dofn(fname,i+1, use_colnum, alias=alias) | |
939 | - fnames[i] = fname | |
940 | - | |
941 | - fname = mrd_chkfn(fname, fnames, i) | |
942 | - | |
943 | - mrd_atype, fform, ftype, flen | |
944 | - typarr[i] = ftype | |
945 | - lenarr[i] = flen | |
946 | - posarr[i] = fpos | |
947 | - nullarr[i] = fnull | |
948 | - | |
949 | - for j=0, n_elements(types) - 1 do begin | |
950 | - if ftype eq types[j] then begin | |
951 | - if ftype ne 'A' then begin | |
952 | - val = sclstr[j] | |
953 | - endif else begin | |
954 | - val = 'string(replicate(32b,'+strtrim(flen,2)+'))' | |
955 | - endelse | |
956 | - | |
957 | - fvalues[i] = val | |
958 | - | |
959 | - goto, next_col | |
960 | - endif | |
961 | - endfor | |
962 | - | |
963 | - print, 'MRDFITS: Invalid format code:',ftype, ' for column ', i+1 | |
964 | - status = -1 | |
965 | - return | |
966 | - next_col: | |
967 | - endfor | |
968 | - | |
969 | - if scaling then begin | |
970 | - w = where(scales ne 1.0d0 or offsets ne 0.0d0) | |
971 | - if w[0] eq -1 then scaling = 0 | |
972 | - endif | |
973 | - | |
974 | - if not scaling and not keyword_set(columns) then begin | |
975 | - table = mrd_struct(fnames, fvalues, nrows, structyp=structyp, $ | |
976 | - silent=silent) | |
977 | - endif else begin | |
978 | - table = mrd_struct(fnames, fvalues, nrows, silent=silent) | |
979 | - endelse | |
980 | - | |
981 | - if not keyword_set(silent) then begin | |
982 | - print,'MRDFITS: ASCII table. ',strcompress(string(nfld)), $ | |
983 | - ' columns by ',strcompress(string(nrows)), ' rows.' | |
984 | - endif | |
985 | - | |
986 | - status = 0 | |
987 | - return | |
988 | - | |
989 | -end | |
990 | - | |
991 | - | |
992 | -; Eliminate columns from the table that do not match the | |
993 | -; user specification. | |
994 | -pro mrd_columns, table, columns, fnames, fvalues, $ | |
995 | - vcls, vtpes, scales, offsets, scaling, $ | |
996 | - structyp=structyp, silent=silent | |
997 | - | |
998 | - | |
999 | - | |
1000 | - sz = size(columns) | |
1001 | - | |
1002 | - type = sz[sz[0]+1] | |
1003 | - nele = sz[sz[0]+2] | |
1004 | - if type eq 8 or type eq 6 or type eq 0 then return ; Can't use structs | |
1005 | - ; or complex. | |
1006 | - | |
1007 | - if type eq 4 or type eq 5 then tcols = fix(columns) | |
1008 | - if type eq 1 or type eq 2 or type eq 3 then tcols = columns | |
1009 | - | |
1010 | - ; Convert strings to uppercase and compare with column names. | |
1011 | - | |
1012 | - if type eq 7 then begin | |
1013 | - for i=0, nele-1 do begin | |
1014 | - cname = strupcase(columns[i]) | |
1015 | - w = where(cname eq strupcase(fnames)) | |
1016 | - if w[0] ne -1 then begin | |
1017 | - if n_elements(tcols) eq 0 then begin | |
1018 | - tcols = w[0]+1 | |
1019 | - endif else begin | |
1020 | - tcols = [tcols, w[0]+1] | |
1021 | - endelse | |
1022 | - endif | |
1023 | - endfor | |
1024 | - endif | |
1025 | - | |
1026 | - ; Subtract one from column indices and check that all indices >= 0. | |
1027 | - if n_elements(tcols) gt 0 then begin | |
1028 | - tcols = tcols-1 | |
1029 | - w = where(tcols ge 0) | |
1030 | - if w[0] eq -1 then begin | |
1031 | - dummy = temporary(tcols) | |
1032 | - endif | |
1033 | - endif | |
1034 | - | |
1035 | - if n_elements(tcols) le 0 then begin | |
1036 | - print, 'MRDFITS: No columns match' | |
1037 | - | |
1038 | - ; Undefine variables. First ensure they are defined, then | |
1039 | - ; use temporary() to undefine them. | |
1040 | - table = 0 | |
1041 | - fnames = 0 | |
1042 | - fvalues = 0 | |
1043 | - vcls = 0 | |
1044 | - vtpes = 0 | |
1045 | - scales = 0 | |
1046 | - offsets = 0 | |
1047 | - dummy = temporary(fnames) | |
1048 | - dummy = temporary(fvalues) | |
1049 | - dummy = temporary(vcls) | |
1050 | - dummy = temporary(vtpes) | |
1051 | - dummy = temporary(scales) | |
1052 | - dummy = temporary(offsets) | |
1053 | - scaling = 0 | |
1054 | - | |
1055 | - endif else begin | |
1056 | - | |
1057 | - ; Replace arrays with only desired columns. | |
1058 | - | |
1059 | - fnames = fnames[tcols] | |
1060 | - fvalues = fvalues[tcols] | |
1061 | - | |
1062 | - ; Check if there are still variable length columns. | |
1063 | - if n_elements(vcls) gt 0 then begin | |
1064 | - vcls = vcls[tcols] | |
1065 | - vtpes = vtpes[tcols] | |
1066 | - w = where(vcls eq 1) | |
1067 | - if w[0] eq -1 then begin | |
1068 | - dummy = temporary(vcls) | |
1069 | - dummy = temporary(vtpes) | |
1070 | - endif | |
1071 | - endif | |
1072 | - | |
1073 | - ; Check if there are still columns that need scaling. | |
1074 | - if n_elements(scales) gt 0 then begin | |
1075 | - scales = scales[tcols] | |
1076 | - offsets = offsets[tcols] | |
1077 | - w = where(scales ne 1.0d0 or offsets ne 0.0d0) | |
1078 | - if w[0] eq -1 then scaling = 0 | |
1079 | - endif | |
1080 | - | |
1081 | - | |
1082 | - ndim = n_elements(table) | |
1083 | - | |
1084 | - if scaling or n_elements(vcls) gt 0 then begin | |
1085 | - tabx = mrd_struct(fnames, fvalues, ndim, silent=silent ) | |
1086 | - endif else begin | |
1087 | - tabx = mrd_struct(fnames, fvalues, ndim, structyp=structyp, silent=silent ) | |
1088 | - endelse | |
1089 | - | |
1090 | - for i=0, n_elements(tcols)-1 do begin | |
1091 | - tabx.(i) = table.(tcols[i]); | |
1092 | - endfor | |
1093 | - | |
1094 | - table = tabx | |
1095 | - endelse | |
1096 | - | |
1097 | -end | |
1098 | - | |
1099 | - | |
1100 | -; Read in the image information. | |
1101 | -pro mrd_read_image, unit, range, maxd, rsize, table, rows = rows,status=status | |
1102 | - | |
1103 | - ; | |
1104 | - ; Unit Unit to read data from. | |
1105 | - ; Table Table/array to read information into. | |
1106 | - ; | |
1107 | - | |
1108 | - error=0 | |
1109 | - catch,error | |
1110 | - if error ne 0 then begin | |
1111 | - catch,/cancel | |
1112 | - status=-2 | |
1113 | - return | |
1114 | - endif | |
1115 | - | |
1116 | - ; If necessary skip to beginning of desired data. | |
1117 | - | |
1118 | - if range[0] gt 0 then mrd_skip, unit, range[0]*rsize | |
1119 | - | |
1120 | - status=-2 | |
1121 | - if rsize eq 0 then return | |
1122 | - | |
1123 | - on_ioerror,done | |
1124 | - readu, unit, table | |
1125 | - | |
1126 | - if N_elements(rows) GT 0 then begin | |
1127 | - row1 = rows- range[0] | |
1128 | - case size(table,/n_dimen) of | |
1129 | - 1: table = table[row1] | |
1130 | - 2: table = table[*,row1] | |
1131 | - 3: table = table[*,*,row1] | |
1132 | - 4: table = table[*,*,*,row1] | |
1133 | - 5: table = table[*,*,*,*,row1] | |
1134 | - 6: table = table[*,*,*,*,*,row1] | |
1135 | - 7: table = table[*,*,*,*,*,*,row1] | |
1136 | - 8: table = table[*,*,*,*,*,*,*,row1] | |
1137 | - else: begin | |
1138 | - print,'MRDFITS: Subscripted image must be between 1 and 8 dimensions' | |
1139 | - status = -1 | |
1140 | - return | |
1141 | - end | |
1142 | - endcase | |
1143 | - endif | |
1144 | - | |
1145 | - ; Skip to the end of the data | |
1146 | - | |
1147 | - skipB = 2880 - (maxd*rsize) mod 2880 | |
1148 | - if skipB eq 2880 then skipB = 0 | |
1149 | - | |
1150 | - if range[1] lt maxd-1 then begin | |
1151 | - skipB = skipB + (maxd-range[1]-1)*rsize | |
1152 | - endif | |
1153 | - | |
1154 | - mrd_skip, unit, skipB | |
1155 | - swap_endian_inplace, table,/swap_if_little | |
1156 | - | |
1157 | - ; Fix offset for unsigned data | |
1158 | - type = mrd_unsignedtype(table) | |
1159 | - if type gt 0 then begin | |
1160 | - table = table - mrd_unsigned_offset(type) | |
1161 | - endif | |
1162 | - | |
1163 | - status=0 | |
1164 | - done: | |
1165 | - | |
1166 | -;-- probably an EOF | |
1167 | - | |
1168 | - if status ne 0 then free_lun,unit | |
1169 | - | |
1170 | - return | |
1171 | -end | |
1172 | - | |
1173 | -; Truncate superfluous axes. | |
1174 | - | |
1175 | -pro mrd_axes_trunc,naxis, dims, silent | |
1176 | - | |
1177 | - mysilent = silent | |
1178 | - for i=naxis-1,1,-1 do begin | |
1179 | - | |
1180 | - if dims[i] eq 1 then begin | |
1181 | - if not mysilent then begin | |
1182 | - print, 'MRDFITS: Truncating unused dimensions' | |
1183 | - mysilent = 1 | |
1184 | - endif | |
1185 | - dims = dims[0:i-1] | |
1186 | - naxis = naxis - 1 | |
1187 | - | |
1188 | - endif else return | |
1189 | - | |
1190 | - endfor | |
1191 | - | |
1192 | - return | |
1193 | -end | |
1194 | - | |
1195 | -; Define structure/array to hold a FITS image. | |
1196 | -pro mrd_image, header, range, maxd, rsize, table, scales, offsets, scaling, $ | |
1197 | - status, silent=silent, unsigned=unsigned, rows = rows | |
1198 | - | |
1199 | - ; | |
1200 | - ; Header FITS header for table. | |
1201 | - ; Range Range of data to be retrieved. | |
1202 | - ; Rsize Size of a row or group. | |
1203 | - ; Table Structure to be defined. | |
1204 | - ; Status Return status | |
1205 | - ; Silent=silent Suppress info messages? | |
1206 | - | |
1207 | - table = 0 | |
1208 | - | |
1209 | - ; type 0 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 | |
1210 | - lens = [ 0, 1, 2, 4, 4, 8, 0, 0, 0, 0, 0, 0, 2, 4, 8, 8] | |
1211 | - typstrs=['', 'Byte', 'Int*2', 'Int*4', 'Real*4', 'Real*8','','','','','','', 'UInt*2', 'Uint*4', 'Int*8', 'Uint*8'] | |
1212 | - typarr= ['', 'bytarr', 'intarr', 'lonarr', 'fltarr', 'dblarr','','','','','','','uintarr', 'ulonarr', 'lon64arr', 'ulon64arr'] | |
1213 | - | |
1214 | - status = 0 | |
1215 | - | |
1216 | - | |
1217 | - naxis = fxpar(header, 'NAXIS') | |
1218 | - bitpix= fxpar(header, 'BITPIX') | |
1219 | - if naxis gt 0 then begin | |
1220 | - dims = long64(fxpar(header, 'NAXIS*', Count = N_axis)) | |
1221 | - if N_axis GT naxis then begin | |
1222 | -; Check if extra NAXISn keywords are present (though this is not legal FITS) | |
1223 | - nextra = N_axis - naxis | |
1224 | - dim_extra = dims[naxis:N_axis-1] | |
1225 | - if total(dim_extra) EQ nextra then $ | |
1226 | - dims = dims[0:naxis-1] else $ | |
1227 | - message,'ERROR - NAXIS = ' + strtrim(naxis,2) + $ | |
1228 | - ' but NAXIS' + strtrim(N_axis,2) + ' keyword present' | |
1229 | - endif | |
1230 | - endif else dims = 0 | |
1231 | - | |
1232 | - gcount = fxpar(header, 'GCOUNT') | |
1233 | - pcount = fxpar(header, 'PCOUNT') | |
1234 | - isgroup = fxpar(header, 'GROUPS') | |
1235 | - gcount = long(gcount) | |
1236 | - | |
1237 | - xscale = fxpar(header, 'BSCALE', count=cnt) | |
1238 | - if cnt eq 0 then xscale = 1 ;Corrected 06/29/06 | |
1239 | - | |
1240 | - xunsigned = mrd_chkunsigned(bitpix, xscale, $ | |
1241 | - fxpar(header, 'BZERO'), unsigned=unsigned) | |
1242 | - ; Note that type is one less than the type signifier returned in the size call. | |
1243 | - type = -1 | |
1244 | - | |
1245 | - if not xunsigned then begin | |
1246 | - | |
1247 | - if bitpix eq 8 then type = 1 $ | |
1248 | - else if bitpix eq 16 then type = 2 $ | |
1249 | - else if bitpix eq 32 then type = 3 $ | |
1250 | - else if bitpix eq -32 then type = 4 $ | |
1251 | - else if bitpix eq -64 then type = 5 $ | |
1252 | - else if bitpix eq 64 then type = 14 | |
1253 | - | |
1254 | - endif else begin | |
1255 | - | |
1256 | - if bitpix eq 16 then type = 12 $ | |
1257 | - else if bitpix eq 32 then type = 13 $ | |
1258 | - else if bitpix eq 64 then type = 15 | |
1259 | - | |
1260 | - endelse | |
1261 | - | |
1262 | - if type eq -1 then begin | |
1263 | - print,'MRDFITS: Error: Invalid BITPIX: '+strtrim(bitpix) | |
1264 | - table = 0 | |
1265 | - return | |
1266 | - endif | |
1267 | - | |
1268 | - ; Note that for random groups data we must ignore the first NAXISn keyword. | |
1269 | - if isgroup GT 0 then begin | |
1270 | - | |
1271 | - | |
1272 | - range[0] = range[0] > 0 | |
1273 | - if (range[1] eq -1) then begin | |
1274 | - range[1] = gcount-1 | |
1275 | - endif else begin | |
1276 | - range[1] = range[1] < gcount - 1 | |
1277 | - endelse | |
1278 | - | |
1279 | - maxd = gcount | |
1280 | - | |
1281 | - if (n_elements(dims) gt 1) then begin | |
1282 | - dims = dims[1:*] | |
1283 | - naxis = naxis-1 | |
1284 | - endif else begin | |
1285 | - print, 'MRDFITS: Warning: No data specified for group data.' | |
1286 | - dims = [0] | |
1287 | - naxis = 0 | |
1288 | - endelse | |
1289 | - | |
1290 | - ; The last entry is the scaling for the sample data. | |
1291 | - | |
1292 | - if (pcount gt 0) then begin | |
1293 | - scales = dblarr(pcount+1) | |
1294 | - offsets = dblarr(pcount+1) | |
1295 | - endif | |
1296 | - | |
1297 | - values = strarr(2) | |
1298 | - | |
1299 | - | |
1300 | - mrd_axes_trunc, naxis, dims, keyword_set(silent) | |
1301 | - | |
1302 | - values[0] = typarr[type] + "("+string(pcount)+")" | |
1303 | - rsize = dims[0] | |
1304 | - sarr = "(" + strcompress(string(dims[0]), /remo ) | |
1305 | - | |
1306 | - for i=1, naxis-1 do begin | |
1307 | - | |
1308 | - sarr = sarr + "," + strcompress(string(dims[i]),/remo) | |
1309 | - rsize = rsize*dims[i] | |
1310 | - | |
1311 | - endfor | |
1312 | - | |
1313 | - sarr = sarr + ")" | |
1314 | - | |
1315 | - if not keyword_set(silent) then print,'MRDFITS--Image with groups:', $ | |
1316 | - ' Ngroup=',strcompress(string(gcount)),' Npar=', $ | |
1317 | - strcompress(string(pcount),/remo), ' Group=', sarr, ' Type=',typstrs[type] | |
1318 | - | |
1319 | - sarr = typarr[type] + sarr | |
1320 | - values[1] = sarr | |
1321 | - rsize = (rsize + pcount)*lens[type] | |
1322 | - | |
1323 | - table = mrd_struct(['params','array'], values, range[1]-range[0]+1, $ | |
1324 | - silent=silent) | |
1325 | - | |
1326 | - if xunsigned then begin | |
1327 | - fxaddpar,header, 'BZERO', 0, 'Reset by MRDFITS v'+mrd_version() | |
1328 | - endif | |
1329 | - | |
1330 | - | |
1331 | - for i=0, pcount-1 do begin | |
1332 | - | |
1333 | - istr = strcompress(string(i+1),/remo) | |
1334 | - | |
1335 | - scales[i] = fxpar(header, 'PSCAL'+istr) | |
1336 | - if scales[i] eq 0.0d0 then scales[i] =1.0d0 | |
1337 | - | |
1338 | - offsets[i] = fxpar(header, 'PZERO'+istr) | |
1339 | - | |
1340 | - scales[pcount] = fxpar(header, 'BSCALE') | |
1341 | - if scales[pcount] eq 0.0d0 then scales[pcount] = 1.0d0 | |
1342 | - offsets[pcount] = fxpar(header, 'BZERO') | |
1343 | - | |
1344 | - endfor | |
1345 | - | |
1346 | - if scaling then begin | |
1347 | - w = where(scales ne 1.0d0 or offsets ne 0.0d0) | |
1348 | - if w[0] eq -1 then scaling = 0 | |
1349 | - endif | |
1350 | - | |
1351 | - endif else begin | |
1352 | - | |
1353 | - if naxis eq 0 then begin | |
1354 | - | |
1355 | - rsize = 0 | |
1356 | - table = 0 | |
1357 | - if not keyword_set(silent) then begin | |
1358 | - print, 'MRDFITS: Null image, NAXIS=0' | |
1359 | - endif | |
1360 | - return | |
1361 | - | |
1362 | - endif | |
1363 | - | |
1364 | - if gcount gt 1 then begin | |
1365 | - dims = [dims, gcount] | |
1366 | - naxis = naxis + 1 | |
1367 | - endif | |
1368 | - | |
1369 | - mrd_axes_trunc, naxis, dims, keyword_set(silent) | |
1370 | - | |
1371 | - | |
1372 | - maxd = dims[naxis-1] | |
1373 | - | |
1374 | - if range[0] ne -1 then begin | |
1375 | - range[0] = range[0]<(maxd-1) | |
1376 | - range[1] = range[1]<(maxd-1) | |
1377 | - endif else begin | |
1378 | - range[0] = 0 | |
1379 | - range[1] = maxd - 1 | |
1380 | - endelse | |
1381 | - | |
1382 | - Nlast = dims[naxis-1] | |
1383 | - dims[naxis-1] = range[1]-range[0]+1 | |
1384 | - pdims = dims | |
1385 | - if N_elements(rows) GT 0 then begin | |
1386 | - if max(rows) GE Nlast then begin | |
1387 | - print, 'MRDFITS: Row numbers must be between 0 and ' + $ | |
1388 | - strtrim(Nlast-1,2) | |
1389 | - status = -1 & rsize = 0 | |
1390 | - return | |
1391 | - endif | |
1392 | - pdims[naxis-1] = N_elements(rows) | |
1393 | - endif | |
1394 | - | |
1395 | - if not keyword_set(silent) then begin | |
1396 | - str = '(' | |
1397 | - for i=0, naxis-1 do begin | |
1398 | - if i ne 0 then str = str + ',' | |
1399 | - str = str + strcompress(string(pdims[i]),/remo) | |
1400 | - endfor | |
1401 | - str = str+')' | |
1402 | - print, 'MRDFITS: Image array ',str, ' Type=', typstrs[type] | |
1403 | - endif | |
1404 | - | |
1405 | - rsize = 1 | |
1406 | - | |
1407 | - if naxis gt 1 then for i=0, naxis - 2 do rsize=rsize*dims[i] | |
1408 | - rsize = rsize*lens[type] | |
1409 | - sz = lonarr(naxis+3) | |
1410 | - sz[0] = naxis | |
1411 | - sz[1:naxis] = dims | |
1412 | - nele = 1l | |
1413 | - | |
1414 | - for i=0, naxis-1 do begin | |
1415 | - nele = nele*dims[i] | |
1416 | - endfor | |
1417 | - | |
1418 | - sz[naxis+1] = type | |
1419 | - sz[naxis+2] = nele | |
1420 | - | |
1421 | - if nele gt 0 then begin | |
1422 | - table = make_array(size=sz) | |
1423 | - endif else begin | |
1424 | - table = 0 | |
1425 | - endelse | |
1426 | - | |
1427 | - scales = dblarr(1) | |
1428 | - offsets = dblarr(1) | |
1429 | - | |
1430 | - if xunsigned then begin | |
1431 | - fxaddpar,header, 'BZERO', 0, 'Updated by MRDFITS v'+mrd_version() | |
1432 | - endif | |
1433 | - | |
1434 | - scales[0] = fxpar(header, 'BSCALE') | |
1435 | - offsets[0] = fxpar(header, 'BZERO') | |
1436 | - | |
1437 | - if scales[0] eq 0.0d0 then scales[0] = 1.0d0 | |
1438 | - if scaling and scales[0] eq 1.0d0 and offsets[0] eq 0.0d0 then scaling = 0 | |
1439 | - endelse | |
1440 | - | |
1441 | - status = 0 | |
1442 | - return | |
1443 | - | |
1444 | -end | |
1445 | - | |
1446 | -; Scale an array of pointers | |
1447 | -pro mrd_ptrscale, array, scale, offset | |
1448 | - | |
1449 | - for i=0, n_elements(array)-1 do begin | |
1450 | - if ptr_valid(array[i]) then begin | |
1451 | - array[i] = ptr_new(*array[i] * scale + offset) | |
1452 | - endif | |
1453 | - endfor | |
1454 | -end | |
1455 | - | |
1456 | -; Scale a FITS array or table. | |
1457 | -pro mrd_scale, type, scales, offsets, table, header, $ | |
1458 | - fnames, fvalues, nrec, dscale = dscale, structyp=structyp, silent=silent | |
1459 | - ; | |
1460 | - ; Type: FITS file type, 0=image/primary array | |
1461 | - ; 1=ASCII table | |
1462 | - ; 2=Binary table | |
1463 | - ; | |
1464 | - ; scales: An array of scaling info | |
1465 | - ; offsets: An array of offset information | |
1466 | - ; table: The FITS data. | |
1467 | - ; header: The FITS header. | |
1468 | - ; dscale: Should data be scaled to R*8? | |
1469 | - ; fnames: Names of table columns. | |
1470 | - ; fvalues: Values of table columns. | |
1471 | - ; nrec: Number of records used. | |
1472 | - ; structyp: Structure name. | |
1473 | - | |
1474 | - w = where(scales ne 1.d0 or offsets ne 0.d0) | |
1475 | - if w[0] eq -1 then return | |
1476 | - ww = where(scales eq 1.d0 and offsets eq 0.d0) | |
1477 | - | |
1478 | - ; First do ASCII and Binary tables. | |
1479 | - if type ne 0 then begin | |
1480 | - | |
1481 | - if type eq 1 then begin | |
1482 | - if keyword_set(dscale) then begin | |
1483 | - fvalues[w] = '0.0d0' | |
1484 | - endif else begin | |
1485 | - fvalues[w] = '0.0' | |
1486 | - endelse | |
1487 | - endif else if type eq 2 then begin | |
1488 | - | |
1489 | - if keyword_set(dscale) then begin | |
1490 | - sclr = '0.d0' | |
1491 | - vc = 'dblarr' | |
1492 | - endif else begin | |
1493 | - sclr = '0.0' | |
1494 | - vc = 'fltarr' | |
1495 | - endelse | |
1496 | - | |
1497 | - for i=0, n_elements(w)-1 do begin | |
1498 | - col = w[i] | |
1499 | - sz = size(table[0].(col)) | |
1500 | - | |
1501 | - ; Handle pointer columns | |
1502 | - if sz[sz[0]+1] eq 10 then begin | |
1503 | - fvalues[col] = 'ptr_new()' | |
1504 | - | |
1505 | - ; Scalar columns | |
1506 | - endif else if sz[0] eq 0 then begin | |
1507 | - fvalues[col] = sclr | |
1508 | - | |
1509 | - ; Vectors | |
1510 | - endif else begin | |
1511 | - str = vc + '(' | |
1512 | - for j=0, sz[0]-1 do begin | |
1513 | - if j ne 0 then str = str + ',' | |
1514 | - str = str + strtrim(sz[j+1],2) | |
1515 | - endfor | |
1516 | - str = str + ')' | |
1517 | - fvalues[col] = str | |
1518 | - | |
1519 | - endelse | |
1520 | - | |
1521 | - endfor | |
1522 | - endif | |
1523 | - | |
1524 | - tabx = mrd_struct(fnames, fvalues, nrec, structyp=structyp, silent=silent ) | |
1525 | - | |
1526 | - ; Just copy the unscaled columns | |
1527 | - if ww[0] ne -1 then begin | |
1528 | - | |
1529 | - for i=0, n_elements(ww)-1 do begin | |
1530 | - tabx.(ww[i]) = table.(ww[i]) | |
1531 | - endfor | |
1532 | - endif | |
1533 | - | |
1534 | - for i=0, n_elements(w)-1 do begin | |
1535 | - | |
1536 | - | |
1537 | - sz = size(tabx.(w[i])) | |
1538 | - if sz[sz[0]+1] eq 10 then begin | |
1539 | - mrd_ptrscale, table.(w[i]), scales[w[i]], offsets[w[i]] | |
1540 | - endif | |
1541 | - tabx.(w[i]) = table.(w[i])*scales[w[i]] + offsets[w[i]] | |
1542 | - | |
1543 | - istr = strcompress(string(w[i]+1), /remo) | |
1544 | - fxaddpar, header, 'TSCAL'+istr, 1.0, 'Set by MRD_SCALE' | |
1545 | - fxaddpar, header, 'TZERO'+istr, 0.0, 'Set by MRD_SCALE' | |
1546 | - endfor | |
1547 | - | |
1548 | - table = temporary(tabx) | |
1549 | - | |
1550 | - endif else begin | |
1551 | - ; Now process images and random groups. | |
1552 | - | |
1553 | - sz = size(table[0]) | |
1554 | - if sz[sz[0]+1] ne 8 then begin | |
1555 | - ; Not a structure so we just have an array of data. | |
1556 | - if keyword_set(dscale) then begin | |
1557 | - table = table*scales[0]+offsets[0] | |
1558 | - endif else begin | |
1559 | - table = table*float(scales[0]) + float(offsets[0]) | |
1560 | - endelse | |
1561 | - fxaddpar, header, 'BSCALE', 1.0, 'Set by MRD_SCALE' | |
1562 | - fxaddpar, header, 'BZERO', 0.0, 'Set by MRD_SCALE' | |
1563 | - | |
1564 | - endif else begin | |
1565 | - ; Random groups. Get the number of parameters by looking | |
1566 | - ; at the first element in the table. | |
1567 | - nparam = n_elements(table[0].(0)) | |
1568 | - if keyword_set(dscale) then typ = 'dbl' else typ='flt' | |
1569 | - s1 = typ+'arr('+string(nparam)+')' | |
1570 | - ngr = n_elements(table) | |
1571 | - sz = size(table[0].(1)) | |
1572 | - if sz[0] eq 0 then dims = [1] else dims=sz[1:sz[0]] | |
1573 | - s2 = typ + 'arr(' | |
1574 | - for i=0, n_elements(dims)-1 do begin | |
1575 | - if i ne 0 then s2 = s2+ ',' | |
1576 | - s2 = s2+string(dims[i]) | |
1577 | - endfor | |
1578 | - s2 = s2+')' | |
1579 | - tabx = mrd_struct(['params', 'array'],[s1,s2],ngr, silent=silent) | |
1580 | - | |
1581 | - for i=0, nparam-1 do begin | |
1582 | - istr = strcompress(string(i+1),/remo) | |
1583 | - fxaddpar, header, 'PSCAL'+istr, 1.0, 'Added by MRD_SCALE' | |
1584 | - fxaddpar, header, 'PZERO'+istr, 0.0, 'Added by MRD_SCALE' | |
1585 | - tabx.(0)[i] = table.(0)[i]*scales[i]+offsets[i] | |
1586 | - endfor | |
1587 | - | |
1588 | - tabx.(1) = table.(1)*scales[nparam] + offsets[nparam] | |
1589 | - fxaddpar, header, 'BSCALE', 1.0, 'Added by MRD_SCALE' | |
1590 | - fxaddpar, header, 'BZERO', 0.0, 'Added by MRD_SCALE' | |
1591 | - table = temporary(tabx) | |
1592 | - endelse | |
1593 | - endelse | |
1594 | - | |
1595 | -end | |
1596 | - | |
1597 | -; Read a variable length column into a pointer array. | |
1598 | -pro mrd_varcolumn, vtype, array, heap, off, siz | |
1599 | - | |
1600 | - ; Guaranteed to have at least one non-zero length column | |
1601 | - w = where(siz gt 0) | |
1602 | - nw = n_elements(w) | |
1603 | - | |
1604 | - if vtype eq 'X' then siz = 1 + (siz-1)/8 | |
1605 | - | |
1606 | - siz = siz[w] | |
1607 | - off = off[w] | |
1608 | - | |
1609 | - unsigned = 0 | |
1610 | - if vtype eq '1' then begin | |
1611 | - unsigned = 12 | |
1612 | - endif else if vtype eq '2' then begin | |
1613 | - unsigned = 13 | |
1614 | - endif else if vtype eq '3' then begin | |
1615 | - unsigned = 15; | |
1616 | - endif | |
1617 | - unsigned = mrd_unsigned_offset(unsigned) | |
1618 | - | |
1619 | - | |
1620 | - for j=0, nw-1 do begin | |
1621 | - | |
1622 | - case vtype of | |
1623 | - | |
1624 | - 'L': array[w[j]] = ptr_new( byte(heap,off[j],siz[j]) ) | |
1625 | - 'X': array[w[j]] = ptr_new( byte(heap,off[j],siz[j]) ) | |
1626 | - 'B': array[w[j]] = ptr_new( byte(heap,off[j],siz[j]) ) | |
1627 | - | |
1628 | - 'I': array[w[j]] = ptr_new( fix(heap, off[j], siz[j]) ) | |
1629 | - 'J': array[w[j]] = ptr_new( long(heap, off[j], siz[j]) ) | |
1630 | - 'K': array[w[j]] = ptr_new( long64(heap, off[j], siz[j]) ) | |
1631 | - | |
1632 | - 'E': array[w[j]] = ptr_new( float(heap, off[j], siz[j]) ) | |
1633 | - 'D': array[w[j]] = ptr_new( double(heap, off[j], siz[j]) ) | |
1634 | - | |
1635 | - 'C': array[w[j]] = ptr_new( complex(heap, off[j], siz[j]) ) | |
1636 | - 'M': array[w[j]] = ptr_new( dcomplex(heap, off[j], siz[j]) ) | |
1637 | - | |
1638 | - '1': array[w[j]] = ptr_new( uint(heap, off[j], siz[j]) ) | |
1639 | - '2': array[w[j]] = ptr_new( ulong(heap, off[j], siz[j]) ) | |
1640 | - '3': array[w[j]] = ptr_new( ulong64(heap, off[j], siz[j]) ) | |
1641 | - | |
1642 | - endcase | |
1643 | - | |
1644 | - ; Fix endianness. | |
1645 | - if vtype ne 'B' and vtype ne 'X' and vtype ne 'L' then begin | |
1646 | - swap_endian_inplace, *array[w[j]],/swap_if_little | |
1647 | - endif | |
1648 | - | |
1649 | - ; Scale unsigneds. | |
1650 | - if unsigned gt 0 then *array[w[j]] = *array[w[j]] - unsigned | |
1651 | - | |
1652 | - endfor | |
1653 | -end | |
1654 | - | |
1655 | -; Read a variable length column into a fixed length array. | |
1656 | -pro mrd_fixcolumn, vtype, array, heap, off, siz | |
1657 | - | |
1658 | - w = where(siz gt 0) | |
1659 | - if w[0] eq -1 then return | |
1660 | - | |
1661 | - nw = n_elements(w) | |
1662 | - | |
1663 | - | |
1664 | - if vtype eq 'X' then siz = 1 + (siz-1)/8 | |
1665 | - | |
1666 | - siz = siz[w] | |
1667 | - off = off[w] | |
1668 | - | |
1669 | - for j=0, nw-1 do begin | |
1670 | - case vtype of | |
1671 | - 'L': array[0:siz[j]-1,w[j]] = byte(heap,off[j],siz[j]) | |
1672 | - 'X': array[0:siz[j]-1,w[j]] = byte(heap,off[j],siz[j]) | |
1673 | - 'B': array[0:siz[j]-1,w[j]] = byte(heap,off[j],siz[j]) | |
1674 | - | |
1675 | - 'I': array[0:siz[j]-1,w[j]] = fix(heap, off[j], siz[j]) | |
1676 | - 'J': array[0:siz[j]-1,w[j]] = long(heap, off[j], siz[j]) | |
1677 | - 'K': array[0:siz[j]-1,w[j]] = long64(heap, off[j], siz[j]) | |
1678 | - | |
1679 | - 'E': begin ;Delay conversion until after byteswapping to avoid possible math overflow Feb 2005 | |
1680 | - temp = heap[off[j]: off[j] + 4*siz[j]-1 ] | |
1681 | - byteorder, temp, /LSWAP, /SWAP_IF_LITTLE | |
1682 | - array[0:siz[j]-1,w[j]] = float(temp,0,siz[j]) | |
1683 | - end | |
1684 | - 'D': begin | |
1685 | - temp = heap[off[j]: off[j] + 8*siz[j]-1 ] | |
1686 | - byteorder, temp, /L64SWAP, /SWAP_IF_LITTLE | |
1687 | - array[0:siz[j]-1,w[j]] = double(temp,0,siz[j]) | |
1688 | - end | |
1689 | - 'C': array[0:siz[j]-1,w[j]] = complex(heap, off[j], siz[j]) | |
1690 | - 'M': array[0:siz[j]-1,w[j]] = dcomplex(heap, off[j], siz[j]) | |
1691 | - | |
1692 | - 'A': array[w[j]] = string(byte(heap,off[j],siz[j])) | |
1693 | - | |
1694 | - '1': array[0:siz[j]-1,w[j]] = uint(heap, off[j], siz[j]) | |
1695 | - '2': array[0:siz[j]-1,w[j]] = ulong(heap, off[j], siz[j]) | |
1696 | - '3': array[0:siz[j]-1,w[j]] = ulong64(heap, off[j], siz[j]) | |
1697 | - | |
1698 | - endcase | |
1699 | - | |
1700 | - endfor | |
1701 | - | |
1702 | - ; Fix endianness | |
1703 | - if (vtype ne 'A') and (vtype ne 'B') and (vtype ne 'X') and (vtype ne 'L') and $ | |
1704 | - (vtype NE 'D') and (vtype NE 'E') then begin | |
1705 | - swap_endian_inplace, array, /swap_if_little | |
1706 | - endif | |
1707 | - | |
1708 | - ; Scale unsigned data | |
1709 | - unsigned = 0 | |
1710 | - if vtype eq '1' then begin | |
1711 | - unsigned = 12 | |
1712 | - endif else if vtype eq '2' then begin | |
1713 | - unsigned = 13 | |
1714 | - endif else if vtype eq '3' then begin | |
1715 | - unsigned = 15; | |
1716 | - endif | |
1717 | - | |
1718 | - if unsigned gt 0 then begin | |
1719 | - unsigned = mrd_unsigned_offset(unsigned) | |
1720 | - endif | |
1721 | - | |
1722 | - if unsigned gt 0 then begin | |
1723 | - for j=0, nw-1 do begin | |
1724 | - array[0:siz[j]-1,w[j]] = array[0:siz[j]-1,w[j]] - unsigned | |
1725 | - endfor | |
1726 | - endif | |
1727 | - | |
1728 | - | |
1729 | -end | |
1730 | - | |
1731 | -; Read the heap area to get the actual values of variable | |
1732 | -; length arrays. | |
1733 | -pro mrd_read_heap, unit, header, range, fnames, fvalues, vcls, vtpes, table, $ | |
1734 | - structyp, scaling, scales, offsets, status, silent=silent, $ | |
1735 | - columns=columns, rows = rows, pointer_var=pointer_var, fixed_var=fixed_var | |
1736 | - | |
1737 | - ; | |
1738 | - ; Unit: FITS unit number. | |
1739 | - ; header: FITS header. | |
1740 | - ; fnames: Column names. | |
1741 | - ; fvalues: Column values. | |
1742 | - ; vcols: Column numbers of variable length columns. | |
1743 | - ; vtypes: Actual types of variable length columns | |
1744 | - ; table: Table of data from standard data area, on output | |
1745 | - ; contains the variable length data. | |
1746 | - ; structyp: Structure name. | |
1747 | - ; scaling: Is there going to be scaling of the data? | |
1748 | - ; status: Set to -1 if an error occurs. | |
1749 | - ; | |
1750 | - typstr = 'LXBIJKAEDCM123' | |
1751 | - prefix = ['bytarr(', 'bytarr(', 'bytarr(', 'intarr(', $ | |
1752 | - 'lonarr(', 'lon64arr(', 'string(bytarr(', 'fltarr(', $ | |
1753 | - 'dblarr(', 'cmplxarr(', 'dblarr(2,', $ | |
1754 | - 'uintarr(', 'ulonarr(', 'ulon64arr('] | |
1755 | - | |
1756 | - status = 0 | |
1757 | - | |
1758 | - ; Convert from a list of indicators of whether a column is variable | |
1759 | - ; length to pointers to only the variable columns. | |
1760 | - | |
1761 | - vcols = where(vcls eq 1) | |
1762 | - vtypes = vtpes[vcols] | |
1763 | - | |
1764 | - nv = n_elements(vcols) | |
1765 | - | |
1766 | - ; Find the beginning of the heap area. | |
1767 | - | |
1768 | - heapoff = long64(fxpar(header, 'THEAP')) | |
1769 | - sz = fxpar(header, 'NAXIS1')*fxpar(header, 'NAXIS2') | |
1770 | - | |
1771 | - if heapoff ne 0 and heapoff lt sz then begin | |
1772 | - print, 'MRDFITS: ERROR Heap begins within data area' | |
1773 | - status = -1 | |
1774 | - return | |
1775 | - endif | |
1776 | - | |
1777 | - ; Skip to beginning. | |
1778 | - if (heapoff > sz) then begin | |
1779 | - mrd_skip, unit, heapoff-sz | |
1780 | - endif | |
1781 | - | |
1782 | - ; Get the size of the heap. | |
1783 | - pc = long64(fxpar(header, 'PCOUNT')) | |
1784 | - if heapoff eq 0 then heapoff = sz | |
1785 | - hpsiz = pc - (heapoff-sz) | |
1786 | - | |
1787 | - if (hpsiz gt 0) then heap = bytarr(hpsiz) | |
1788 | - | |
1789 | - | |
1790 | - ; Read in the heap | |
1791 | - readu, unit, heap | |
1792 | - | |
1793 | - ; Skip to the end of the data area. | |
1794 | - skipB = 2880 - (sz+pc) mod 2880 | |
1795 | - if skipB ne 2880 then begin | |
1796 | - mrd_skip, unit, skipB | |
1797 | - endif | |
1798 | - | |
1799 | - ; Find the maximum dimensions of the arrays. | |
1800 | - ; | |
1801 | - ; Note that the variable length column currently has fields which | |
1802 | - ; are I*4 2-element arrays where the first element is the | |
1803 | - ; length of the field on the current row and the second is the | |
1804 | - ; offset into the heap. | |
1805 | - | |
1806 | - vdims = lonarr(nv) | |
1807 | - for i=0, nv-1 do begin | |
1808 | - col = vcols[i] | |
1809 | - curr_col = table.(col) | |
1810 | - vdims[i] = max(curr_col[0,*]) | |
1811 | - w = where(curr_col[0,*] ne vdims[i]) | |
1812 | - if w[0] ne -1 then begin | |
1813 | - if n_elements(lencols) eq 0 then begin | |
1814 | - lencols = [col] | |
1815 | - endif else begin | |
1816 | - lencols=[lencols,col] | |
1817 | - endelse | |
1818 | - endif | |
1819 | - | |
1820 | - if vtypes[i] eq 'X' then vdims[i]=(vdims[i]+7)/8 | |
1821 | - ind = strpos(typstr, vtypes[i]) | |
1822 | - | |
1823 | - ; Note in the following that we ensure that the array is | |
1824 | - ; at least one element long. | |
1825 | - | |
1826 | - fvalues[col] = prefix[ind] + string((vdims[i] > 1)) + ')' | |
1827 | - if vtypes[i] eq 'A' then fvalues[col] = fvalues[col] + ')' | |
1828 | - | |
1829 | - endfor | |
1830 | - | |
1831 | - nfld = n_elements(fnames) | |
1832 | - | |
1833 | - ; Get rid of columns which have no actual data. | |
1834 | - w= intarr(nfld) | |
1835 | - w[*] = 1 | |
1836 | - corres = indgen(nfld) | |
1837 | - | |
1838 | - | |
1839 | - ; Should we get rid of empty columns? | |
1840 | - delete = 1 | |
1841 | - if keyword_set(pointer_var) then delete = pointer_var eq 1 | |
1842 | - | |
1843 | - if delete then begin | |
1844 | - | |
1845 | - ww = where(vdims eq 0) | |
1846 | - if ww[0] ne -1 then begin | |
1847 | - w[vcols[ww]] = 0 | |
1848 | - if not keyword_set(silent) then begin | |
1849 | - print, 'MRDFITS: ', strcompress(string(n_elements(ww))), $ | |
1850 | - ' unused variable length columns deleted' | |
1851 | - endif | |
1852 | - endif | |
1853 | - | |
1854 | - ; Check if all columns have been deleted... | |
1855 | - wx = where(w gt 0) | |
1856 | - if (wx[0] eq -1) then begin | |
1857 | - if not keyword_set(silent) then begin | |
1858 | - print, 'MRDFITS: All columns have been deleted' | |
1859 | - endif | |
1860 | - table = 0 | |
1861 | - return | |
1862 | - endif | |
1863 | - | |
1864 | - | |
1865 | - ; Get rid of unused columns. | |
1866 | - corres = corres[wx] | |
1867 | - fnames = fnames[wx] | |
1868 | - fvalues = fvalues[wx] | |
1869 | - scales = scales[wx] | |
1870 | - offsets = offsets[wx] | |
1871 | - | |
1872 | - wx = where(vdims gt 0) | |
1873 | - | |
1874 | - if (wx[0] eq -1) then begin | |
1875 | - vcols=[-9999] | |
1876 | - x=temporary(vtypes) | |
1877 | - x=temporary(vdims) | |
1878 | - endif else begin | |
1879 | - vcols = vcols[wx] | |
1880 | - vtypes = vtypes[wx] | |
1881 | - vdims = vdims[wx] | |
1882 | - endelse | |
1883 | - endif | |
1884 | - | |
1885 | - if not keyword_set(pointer_var) then begin | |
1886 | - ; Now add columns for lengths of truly variable length records. | |
1887 | - if n_elements(lencols) gt 0 then begin | |
1888 | - if not keyword_set(silent) then begin | |
1889 | - print, 'MRDFITS: ', strcompress(string(n_elements(lencols))), $ | |
1890 | - ' length column[s] added' | |
1891 | - endif | |
1892 | - | |
1893 | - | |
1894 | - for i=0, n_elements(lencols)-1 do begin | |
1895 | - col = lencols[i] | |
1896 | - w = where(col eq corres) | |
1897 | - ww = where(col eq vcols) | |
1898 | - w = w[0] | |
1899 | - ww = ww[0] | |
1900 | - fvstr = '0L' ; <-- Originally, '0l'; breaks under the virtual machine! | |
1901 | - fnstr = 'L'+strcompress(string(col),/remo)+'_'+fnames[w] | |
1902 | - nf = n_elements(fnames) | |
1903 | - | |
1904 | - ; Note that lencols and col refer to the index of the | |
1905 | - ; column before we started adding in the length | |
1906 | - ; columns. | |
1907 | - | |
1908 | - if w eq nf-1 then begin | |
1909 | - ; Subtract -1 for the length columns so 0 -> -1 and | |
1910 | - ; we can distinguish this column. | |
1911 | - | |
1912 | - corres = [corres, -col-1 ] | |
1913 | - fnames = [fnames, fnstr ] | |
1914 | - fvalues = [fvalues, fvstr ] | |
1915 | - scales = [scales, 1.0d0 ] | |
1916 | - offsets = [offsets, 0.0d0 ] | |
1917 | - | |
1918 | - endif else begin | |
1919 | - | |
1920 | - corres = [corres[0:w],-col-1,corres[w+1:nf-1] ] | |
1921 | - fnames = [fnames[0:w],fnstr,fnames[w+1:nf-1] ] | |
1922 | - fvalues = [fvalues[0:w],fvstr,fvalues[w+1:nf-1] ] | |
1923 | - scales = [scales[0:w], 1.0d0, scales[w+1:nf-1] ] | |
1924 | - offsets = [offsets[0:w],0.0d0, offsets[w+1:nf-1] ] | |
1925 | - endelse | |
1926 | - endfor | |
1927 | - endif | |
1928 | - | |
1929 | - endif else begin | |
1930 | - | |
1931 | - ; We'll just read data into pointer arrays. | |
1932 | - for i=0,n_elements(lencols)-1 do begin | |
1933 | - col = lencols[i] | |
1934 | - if vtpes[col] eq 'A' then begin | |
1935 | - fvalues[col] = '" "' | |
1936 | - endif else begin | |
1937 | - fvalues[col] = 'ptr_new()' | |
1938 | - endelse | |
1939 | - endfor | |
1940 | - | |
1941 | - endelse | |
1942 | - | |
1943 | - | |
1944 | - | |
1945 | - ; Generate a new table with the appropriate structure definitions | |
1946 | - if not scaling and not keyword_set(columns) then begin | |
1947 | - tablex = mrd_struct(fnames, fvalues, n_elements(table), structyp=structyp, $ | |
1948 | - silent=silent) | |
1949 | - endif else begin | |
1950 | - tablex = mrd_struct(fnames, fvalues, n_elements(table), silent=silent) | |
1951 | - endelse | |
1952 | - | |
1953 | - | |
1954 | - if N_elements(rows) EQ 0 then nrow = range[1]-range[0]+1 $ | |
1955 | - else nrow = N_elements(rows) | |
1956 | - | |
1957 | - ; I loops over the new table columns, col loops over the old table. | |
1958 | - ; When col is negative, it is a length column. | |
1959 | - for i=0, n_elements(fnames)-1 do begin | |
1960 | - | |
1961 | - col = corres[i] | |
1962 | - | |
1963 | - if col ge 0 then begin | |
1964 | - | |
1965 | - w = where(vcols eq col) | |
1966 | - | |
1967 | - ; First handle the case of a column that is not | |
1968 | - ; variable length -- just copy the column. | |
1969 | - | |
1970 | - if w[0] eq -1 then begin | |
1971 | - | |
1972 | - tablex.(i) = table.(col) | |
1973 | - | |
1974 | - endif else begin | |
1975 | - | |
1976 | - vc = w[0] | |
1977 | - ; Now handle the variable length columns | |
1978 | - | |
1979 | - ; If only one row in table, then | |
1980 | - ; IDL will return curr_col as one-dimensional. | |
1981 | - ; Since this is a variable length pointer column we | |
1982 | - ; know that the dimension of the column is 2. | |
1983 | - curr_col = table.(col) | |
1984 | - | |
1985 | - if (nrow eq 1) then curr_col = reform(curr_col,2,1) | |
1986 | - siz = curr_col[0,*] | |
1987 | - off = curr_col[1,*] | |
1988 | - | |
1989 | - ; Now process each type. | |
1990 | - curr_colx = tablex.(i) | |
1991 | - sz = size(curr_colx) | |
1992 | - if (sz[0] lt 2) then begin | |
1993 | - curr_colx = reform(curr_colx, 1, n_elements(curr_colx), /overwrite) | |
1994 | - endif | |
1995 | - | |
1996 | - | |
1997 | - ; As above we have to worry about IDL truncating | |
1998 | - ; dimensions. This can happen if either | |
1999 | - ; nrow=1 or the max dimension of the column is 1. | |
2000 | - | |
2001 | - | |
2002 | - sz = size(tablex.(i)) | |
2003 | - | |
2004 | - nel = sz[sz[0]+2] | |
2005 | - if nrow eq 1 and nel eq 1 then begin | |
2006 | - curr_colx = make_array(1,1,value=curr_colx) | |
2007 | - endif else if nrow eq 1 then begin | |
2008 | - curr_colx = reform(curr_colx,[nel, 1], /overwrite) | |
2009 | - endif else if nel eq 1 then begin | |
2010 | - curr_colx = reform(curr_colx,[1, nrow], /overwrite) | |
2011 | - endif | |
2012 | - | |
2013 | - vtype = vtypes[vc] | |
2014 | - varying = 0 | |
2015 | - if n_elements(lencols) gt 0 then begin | |
2016 | - varying = where(lencols eq col) | |
2017 | - if varying[0] eq -1 then varying=0 else varying=1 | |
2018 | - endif | |
2019 | - | |
2020 | - if varying and keyword_set(pointer_var) and vtype ne 'A' then begin | |
2021 | - mrd_varcolumn, vtype, curr_colx, heap, off, siz | |
2022 | - endif else begin | |
2023 | - mrd_fixcolumn, vtype, curr_colx, heap, off, siz | |
2024 | - endelse | |
2025 | - | |
2026 | - | |
2027 | - | |
2028 | - if nel eq 1 and nrow eq 1 then begin | |
2029 | - curr_colx = curr_colx[0] | |
2030 | - endif else if nrow eq 1 then begin | |
2031 | - curr_colx = reform(curr_colx, nel, /overwrite) | |
2032 | - endif else if nel eq 1 then begin | |
2033 | - curr_colx = reform(curr_colx, nrow, /overwrite) | |
2034 | - endif | |
2035 | - | |
2036 | - sz = size(curr_colx) | |
2037 | - if sz[1] eq 1 then begin | |
2038 | - sz_tablex = size(tablex.(i)) | |
2039 | - sdimen = sz_tablex[1:sz_tablex[0]] | |
2040 | - tablex.(i) = reform(curr_colx,sdimen) | |
2041 | - endif else begin | |
2042 | - tablex.(i) = curr_colx | |
2043 | - endelse | |
2044 | - | |
2045 | - endelse | |
2046 | - | |
2047 | - endif else begin | |
2048 | - ; Now handle the added columns which hold the lengths | |
2049 | - ; of the variable length columns. | |
2050 | - | |
2051 | - ncol = -col - 1 ; Remember we subtracted an extra one. | |
2052 | - xx = table.(ncol) | |
2053 | - tablex.(i) = reform(xx[0,*]) | |
2054 | - endelse | |
2055 | - endfor | |
2056 | - | |
2057 | - ; Finally get rid of the initial table and return the table with the | |
2058 | - ; variable arrays read in. | |
2059 | - ; | |
2060 | - table = temporary(tablex) | |
2061 | - return | |
2062 | -end | |
2063 | - | |
2064 | -; Read in the binary table information. | |
2065 | -pro mrd_read_table, unit, range, rsize, structyp, nrows, nfld, typarr, table, rows = rows | |
2066 | - | |
2067 | - ; | |
2068 | - ; | |
2069 | - ; Unit Unit to read data from. | |
2070 | - ; Range Desired range | |
2071 | - ; Rsize Size of row. | |
2072 | - ; structyp Structure type. | |
2073 | - ; Nfld Number of fields in structure. | |
2074 | - ; Typarr Field types | |
2075 | - ; Table Table to read information into. | |
2076 | - ; | |
2077 | - | |
2078 | - if range[0] gt 0 then mrd_skip, unit, rsize*range[0] | |
2079 | - readu,unit, table | |
2080 | - if N_elements(rows) GT 0 then table = table[rows- range[0]] | |
2081 | - | |
2082 | - ; Move to the beginning of the heap -- we may have only read some rows of | |
2083 | - ; the data. | |
2084 | - if range[1] lt nrows-1 then begin | |
2085 | - skip_dist = (nrows-range[1]-1)*rsize | |
2086 | - mrd_skip, unit, skip_dist | |
2087 | - endif | |
2088 | - | |
2089 | - | |
2090 | - | |
2091 | - ; If necessary then convert to native format. | |
2092 | - if byte(1L, 0,1) EQ 1 then begin | |
2093 | - | |
2094 | - for i=0, nfld-1 do begin | |
2095 | - | |
2096 | - typ = typarr[i] | |
2097 | - if typ eq 'B' or typ eq 'A' or typ eq 'X' or typ eq 'L' $ | |
2098 | - then goto, nxtfld | |
2099 | - fld = table.(i) | |
2100 | - if typ eq 'I' then byteorder, fld, /htons | |
2101 | - if typ eq 'J' or typ eq 'P' then byteorder, fld, /htonl | |
2102 | - if typ eq 'K' then byteorder, fld, /l64swap | |
2103 | - if typ eq 'E' or typarr[i] eq 'C' then $ | |
2104 | - byteorder, fld, /LSWAP | |
2105 | - | |
2106 | - if typ eq 'D' or typarr[i] eq 'M' then byteorder, fld, /L64SWAP | |
2107 | - | |
2108 | - if n_elements(fld) gt 1 then begin | |
2109 | - | |
2110 | - table.(i) = fld | |
2111 | - endif else begin | |
2112 | - table.(i) = fld[0] | |
2113 | - endelse | |
2114 | - nxtfld: | |
2115 | - endfor | |
2116 | - endif | |
2117 | - | |
2118 | - ; Handle unsigned fields. | |
2119 | - for i=0, nfld-1 do begin | |
2120 | - | |
2121 | - | |
2122 | - type = mrd_unsignedtype(table.(i)) | |
2123 | - | |
2124 | - if type gt 0 then begin | |
2125 | - table.(i) = table.(i) - mrd_unsigned_offset(type) | |
2126 | - endif | |
2127 | - | |
2128 | - | |
2129 | - endfor | |
2130 | - | |
2131 | -end | |
2132 | - | |
2133 | - | |
2134 | -; Check the values of TDIM keywords to see that they have valid | |
2135 | -; dimensionalities. If the TDIM keyword is not present or valid | |
2136 | -; then the a one-dimensional array with a size given in the TFORM | |
2137 | -; keyword is used. | |
2138 | - | |
2139 | -pro mrd_tdim, header, index, flen, arrstr, no_tdim=no_tdim | |
2140 | - | |
2141 | - ; HEADER Current header array. | |
2142 | - ; Index Index of current parameter | |
2143 | - ; flen Len given in TFORM keyword | |
2144 | - ; arrstr String returned to be included within paren's in definition. | |
2145 | - ; no_tdim Disable TDIM processing | |
2146 | - | |
2147 | - arrstr = strcompress(string(flen),/remo) | |
2148 | - | |
2149 | - if keyword_set(no_tdim) then return | |
2150 | - | |
2151 | - tdstr = fxpar(header, 'TDIM'+strcompress(string(index),/remo)) | |
2152 | - if tdstr eq '' then return | |
2153 | - | |
2154 | - ; | |
2155 | - ; Parse the string. It should be of the form '(n1,n2,...nx)' where | |
2156 | - ; all of the n's are positive integers and the product equals flen. | |
2157 | - ; | |
2158 | - tdstr = strcompress(tdstr,/remo) | |
2159 | - len = strlen(tdstr) | |
2160 | - if strmid(tdstr,0,1) ne '(' and strmid(tdstr,len-1,1) ne ')' or len lt 3 then begin | |
2161 | - print, 'MRDFITS: Error: invalid TDIM for column', index | |
2162 | - return | |
2163 | - endif | |
2164 | - | |
2165 | - ; Get rid of parens. | |
2166 | - tdstr = strmid(tdstr,1,len-2) | |
2167 | - len = len-2 | |
2168 | - | |
2169 | - nind = 0 | |
2170 | - cnum = 0 | |
2171 | - | |
2172 | - for nchr=0, len-1 do begin | |
2173 | - c = strmid(tdstr,nchr, 1) | |
2174 | - | |
2175 | - if c ge '0' and c le '9' then begin | |
2176 | - cnum = 10*cnum + long(c) | |
2177 | - | |
2178 | - endif else if c eq ',' then begin | |
2179 | - | |
2180 | - if cnum le 0 then begin | |
2181 | - print,'MRDFITS: Error: invalid TDIM for column', index | |
2182 | - return | |
2183 | - endif | |
2184 | - | |
2185 | - if n_elements(numbs) eq 0 then $ | |
2186 | - numbs = cnum $ | |
2187 | - else numbs = [numbs,cnum] | |
2188 | - | |
2189 | - cnum = 0 | |
2190 | - | |
2191 | - endif else begin | |
2192 | - | |
2193 | - print,'MRDFITS: Error: invalid TDIM for column', index | |
2194 | - return | |
2195 | - | |
2196 | - endelse | |
2197 | - | |
2198 | - endfor | |
2199 | - | |
2200 | - ; Handle the last number. | |
2201 | - if cnum le 0 then begin | |
2202 | - print,'MRDFITS: Error: invalid TDIM for column', index | |
2203 | - return | |
2204 | - endif | |
2205 | - | |
2206 | - if n_elements(numbs) eq 0 then numbs = cnum else numbs = [numbs,cnum] | |
2207 | - | |
2208 | - prod = 1 | |
2209 | - | |
2210 | - for i=0, n_elements(numbs)-1 do prod = prod*numbs[i] | |
2211 | - | |
2212 | - if prod ne flen then begin | |
2213 | - print,'MRDFITS: Error: TDIM/TFORM dimension mismatch' | |
2214 | - return | |
2215 | - endif | |
2216 | - | |
2217 | - arrstr = tdstr | |
2218 | -end | |
2219 | - | |
2220 | -; Define a structure to hold a FITS binary table. | |
2221 | -pro mrd_table, header, structyp, use_colnum, $ | |
2222 | - range, rsize, table, nrows, nfld, typarr, fnames, fvalues, $ | |
2223 | - vcls, vtpes, scales, offsets, scaling, status, rows = rows, $ | |
2224 | - silent=silent, columns=columns, no_tdim=no_tdim, $ | |
2225 | - alias=alias, unsigned=unsigned | |
2226 | - | |
2227 | - ; | |
2228 | - ; Header FITS header for table. | |
2229 | - ; Structyp IDL structure type to be used for | |
2230 | - ; structure. | |
2231 | - ; N_call Number of times this routine has been called. | |
2232 | - ; Table Structure to be defined. | |
2233 | - ; Status Return status. | |
2234 | - ; No_tdim Disable TDIM processing. | |
2235 | - | |
2236 | - table = 0 | |
2237 | - | |
2238 | - types = ['L', 'X', 'B', 'I', 'J', 'K', 'A', 'E', 'D', 'C', 'M', 'P'] | |
2239 | - arrstr = ['bytarr(', 'bytarr(', 'bytarr(', 'intarr(', 'lonarr(', 'lon64arr(', $ | |
2240 | - 'string(replicate(32b,', 'fltarr(', 'dblarr(', 'complexarr(', $ | |
2241 | - 'dcomplexarr(', 'lonarr(2*'] | |
2242 | - bitpix = [ 0, 0, 0, 16, 32, 64, 0, 0, 0, 0, 0, 0] | |
2243 | - | |
2244 | - sclstr = ["'T'", '0B', '0B', '0', '0L', '0LL', '" "', '0.', '0.d0', 'complex(0.,0.)', $ | |
2245 | - 'dcomplex(0.d0,0.d0)', 'lonarr(2)'] | |
2246 | - | |
2247 | - unsarr = ['', '', '', 'uintarr(', 'ulonarr(', 'ulon64arr(']; | |
2248 | - unsscl = ['', '', '', '0U', '0UL', '0ULL'] | |
2249 | - | |
2250 | - | |
2251 | - status = 0 | |
2252 | - | |
2253 | -; NEW WAY: E.S.S. | |
2254 | - | |
2255 | - ;; get info from header. Using vectors is much faster | |
2256 | - ;; when there are many columns | |
2257 | - | |
2258 | - mrd_fxpar, header, xten, nfld, nrow, rsize, fnames, fforms, scales, offsets | |
2259 | - nnames = n_elements(fnames) | |
2260 | - | |
2261 | - ;; nrow will change later | |
2262 | - nrows = nrow | |
2263 | - | |
2264 | - ;; Use scale=1 if not found | |
2265 | - if nnames GT 0 then begin | |
2266 | - wsc=where(scales EQ 0.0d,nwsc) | |
2267 | - IF nwsc NE 0 THEN scales[wsc] = 1.0d | |
2268 | - endif | |
2269 | - | |
2270 | - xten = strtrim(xten,2) | |
2271 | - if xten ne 'BINTABLE' and xten ne 'A3DTABLE' then begin | |
2272 | - print, 'MRDFITS: ERROR - Header is not from binary table.' | |
2273 | - nfld = 0 & status = -1 | |
2274 | - return | |
2275 | - endif | |
2276 | - | |
2277 | - if range[0] ge 0 then begin | |
2278 | - range[0] = range[0] < (nrow-1) | |
2279 | - range[1] = range[1] < (nrow-1) | |
2280 | - endif else begin | |
2281 | - range[0] = 0 | |
2282 | - range[1] = nrow - 1 | |
2283 | - endelse | |
2284 | - | |
2285 | - nrow = range[1] - range[0] + 1 | |
2286 | - if nrow le 0 then begin | |
2287 | - if not keyword_set(silent) then begin | |
2288 | - print, 'MRDFITS: Binary table. ', $ | |
2289 | - strcompress(string(nfld)), ' columns, no rows.' | |
2290 | - endif | |
2291 | - return | |
2292 | - endif | |
2293 | - | |
2294 | - if N_elements(rows) EQ 0 then nrowp = nrow else begin | |
2295 | - bad = where((rows LT range[0]) or (rows GT range[1]), Nbad) | |
2296 | - if Nbad GT 0 then begin | |
2297 | - print,'MRDFITS: Row numbers must be between 0 and ' + $ | |
2298 | - strtrim(nrow-1,2) | |
2299 | - status = -1 | |
2300 | - return | |
2301 | - endif | |
2302 | - nrowp = N_elements(rows) | |
2303 | - endelse | |
2304 | -; rsize = fxpar(header, 'NAXIS1') | |
2305 | - | |
2306 | - ; | |
2307 | - ; Loop over the columns | |
2308 | - | |
2309 | - typarr = strarr(nfld) | |
2310 | -; fnames = strarr(nfld) | |
2311 | - | |
2312 | - fvalues = strarr(nfld) | |
2313 | - dimfld = strarr(nfld) | |
2314 | -; scales = dblarr(nfld) | |
2315 | -; offsets = dblarr(nfld) | |
2316 | - | |
2317 | - vcls = intarr(nfld) | |
2318 | - vtpes = strarr(nfld) | |
2319 | - | |
2320 | - fnames2 = strarr(nfld) | |
2321 | - | |
2322 | - for i=0, nfld-1 do begin | |
2323 | - | |
2324 | - istr = strcompress(string(i+1), /remo) | |
2325 | - | |
2326 | - fname = fnames[i] | |
2327 | - | |
2328 | - ;; check for a name conflict | |
2329 | - fname = mrd_dofn(fname, i+1, use_colnum, alias=alias) | |
2330 | - | |
2331 | - ;; check for a name conflict | |
2332 | - fname = mrd_chkfn(fname, fnames2, i) | |
2333 | - | |
2334 | - ;; copy in the valid name | |
2335 | - fnames[i] = fname | |
2336 | - ;; for checking conflicts | |
2337 | - fnames2[i] = fname | |
2338 | - | |
2339 | -; fname = fxpar(header, 'TTYPE' + istr) | |
2340 | -; fform = strtrim( fxpar(header, 'TFORM' + istr),2) | |
2341 | - | |
2342 | -; scales[i] = fxpar(header, 'TSCAL'+istr) | |
2343 | -; if scales[i] eq 0.d0 then scales[i] = 1.d0 | |
2344 | - | |
2345 | -; offsets[i] = fxpar(header, 'TZERO'+istr) | |
2346 | - | |
2347 | -; fname = mrd_dofn(fname,i+1, use_colnum, alias=alias) | |
2348 | -; fname = mrd_chkfn(fname, fnames, i) | |
2349 | - | |
2350 | -; fnames[i] = fname | |
2351 | - | |
2352 | - fform = fforms[i] | |
2353 | - | |
2354 | - mrd_doff, fform, dim, ftype | |
2355 | - | |
2356 | - ; Treat arrays of length 1 as scalars. | |
2357 | - if dim eq 1 then begin | |
2358 | - dim = 0 | |
2359 | - endif else if dim EQ -1 then begin | |
2360 | - dimfld[i] = -1 | |
2361 | - endif else begin | |
2362 | - mrd_tdim, header, i+1, dim, str, no_tdim=no_tdim | |
2363 | - dimfld[i] = str | |
2364 | - endelse | |
2365 | - | |
2366 | - typarr[i] = ftype | |
2367 | - | |
2368 | - | |
2369 | - ; Find the number of bytes in a bit array. | |
2370 | - | |
2371 | - if ftype eq 'X' and dim gt 0 then begin | |
2372 | - dim = (dim+7)/8 | |
2373 | - dimfld[i] = strtrim(string(dim),2) | |
2374 | - endif | |
2375 | - | |
2376 | - ; Add in the structure label. | |
2377 | - ; | |
2378 | - | |
2379 | - ; Handle variable length columns. | |
2380 | - if ftype eq 'P' then begin | |
2381 | - | |
2382 | - if dim ne 0 and dim ne 1 then begin | |
2383 | - print, 'MRDFITS: Invalid dimension for variable array column '+string(i+1) | |
2384 | - status = -1 | |
2385 | - return | |
2386 | - endif | |
2387 | - | |
2388 | - ppos = strpos(fform, 'P') | |
2389 | - vf = strmid(fform, ppos+1, 1); | |
2390 | - if strpos('LXBIJKAEDCM', vf) eq -1 then begin | |
2391 | - print, 'MRDFITS: Invalid type for variable array column '+string(i+1) | |
2392 | - status = -1 | |
2393 | - return | |
2394 | - endif | |
2395 | - | |
2396 | - vcls[i] = 1 | |
2397 | - | |
2398 | -; xscale =fxpar(header,'TSCAL'+istr,count=cnt) | |
2399 | -; if cnt eq 0 then xscale = 1 | |
2400 | - | |
2401 | -; xunsigned = mrd_chkunsigned(bitpix[ppos], xscale, $ | |
2402 | -; fxpar(header, 'TZERO'+istr), $ | |
2403 | -; unsigned=unsigned) | |
2404 | - | |
2405 | - xunsigned = mrd_chkunsigned(bitpix[ppos], scales[i], $ | |
2406 | - offsets[i], $ | |
2407 | - unsigned=unsigned) | |
2408 | - | |
2409 | - if (xunsigned) then begin | |
2410 | - | |
2411 | - if vf eq 'I' then vf = '1' $ | |
2412 | - else if vf eq 'J' then vf = '2' $ | |
2413 | - else if vf eq 'K' then vf = '3' | |
2414 | - | |
2415 | - endif | |
2416 | - | |
2417 | - vtpes[i] = vf | |
2418 | - dim = 0 | |
2419 | - | |
2420 | - endif | |
2421 | - | |
2422 | - | |
2423 | - for j=0, n_elements(types) - 1 do begin | |
2424 | - | |
2425 | - if ftype eq types[j] then begin | |
2426 | - | |
2427 | -; xscale = fxpar(header, 'TSCAL'+istr, count=cnt) | |
2428 | -; if cnt eq 0 then xscale = 1 | |
2429 | - | |
2430 | -; xunsigned = mrd_chkunsigned(bitpix[j], xscale, $ | |
2431 | -; fxpar(header, 'TZERO'+istr), $ | |
2432 | -; unsigned=unsigned) | |
2433 | - | |
2434 | - xunsigned = mrd_chkunsigned(bitpix[j], scales[i], $ | |
2435 | - offsets[i], $ | |
2436 | - unsigned=unsigned) | |
2437 | - | |
2438 | - if xunsigned then begin | |
2439 | - fxaddpar, header, 'TZERO'+istr, 0, 'Modified by MRDFITS V'+mrd_version() | |
2440 | - offsets[i] = 0 ;; C. Markwardt Aug 2007 - reset to zero so offset is not applied twice' | |
2441 | - endif | |
2442 | - | |
2443 | - if dim eq 0 then begin | |
2444 | - | |
2445 | - if xunsigned then begin | |
2446 | - fvalues[i] = unsscl[j] | |
2447 | - endif else begin | |
2448 | - fvalues[i] = sclstr[j] | |
2449 | - endelse | |
2450 | - | |
2451 | - endif else begin | |
2452 | - | |
2453 | - if xunsigned then begin | |
2454 | - line = unsarr[j] | |
2455 | - endif else begin | |
2456 | - line = arrstr[j] | |
2457 | - endelse | |
2458 | - | |
2459 | - line = line + dimfld[i] + ')' | |
2460 | - if ftype eq 'A' then line = line + ')' | |
2461 | - fvalues[i] = line | |
2462 | - | |
2463 | - endelse | |
2464 | - | |
2465 | - goto, next_col | |
2466 | - | |
2467 | - endif | |
2468 | - | |
2469 | - endfor | |
2470 | - | |
2471 | - print, 'MRDFITS: Invalid format code:',ftype, ' for column ', i+1 | |
2472 | - status = -1 | |
2473 | - return | |
2474 | - next_col: | |
2475 | - endfor | |
2476 | - | |
2477 | - ; Check if there are any variable length columns. If not then | |
2478 | - ; undefine vcls and vtpes | |
2479 | - w = where(vcls eq 1) | |
2480 | - if w[0] eq -1 then begin | |
2481 | - dummy = temporary(vcls) | |
2482 | - dummy = temporary(vtpes) | |
2483 | - dummy = 0 | |
2484 | - endif | |
2485 | - | |
2486 | - if scaling then begin | |
2487 | - w = where(scales ne 1.0d0 or offsets ne 0.0d0) | |
2488 | - if w[0] eq -1 then scaling = 0 | |
2489 | - endif | |
2490 | - | |
2491 | - zero = where(long(dimfld) LT 0L, N_zero) | |
2492 | - if N_zero GT 0 then begin | |
2493 | - | |
2494 | - if N_zero Eq nfld then begin | |
2495 | - print,'MRDFITS: Error - All fields have zero length' | |
2496 | - return | |
2497 | - endif | |
2498 | - | |
2499 | - for i=0, N_zero-1 do begin | |
2500 | - print,'MRDFITS: Table column ' + fnames[zero[i]] + ' has zero length' | |
2501 | - endfor | |
2502 | - | |
2503 | - nfld = nfld - N_zero | |
2504 | - good = where(dimfld GE 0) | |
2505 | - fnames = fnames[good] | |
2506 | - fvalues = fvalues[good] | |
2507 | - typarr = typarr[good] ;Added 2005-1-6 (A.Csillaghy) | |
2508 | - | |
2509 | - endif | |
2510 | - | |
2511 | - if n_elements(vcls) eq 0 and (not scaling) and not keyword_set(columns) then begin | |
2512 | - | |
2513 | - table = mrd_struct(fnames, fvalues, nrow, structyp=structyp, silent=silent ) | |
2514 | - | |
2515 | - endif else begin | |
2516 | - | |
2517 | - table = mrd_struct(fnames, fvalues, nrow, silent=silent ) | |
2518 | - | |
2519 | - endelse | |
2520 | - | |
2521 | - if not keyword_set(silent) then begin | |
2522 | - print, 'MRDFITS: Binary table. ',strcompress(string(nfld)), ' columns by ', $ | |
2523 | - strcompress(string(nrowp)), ' rows.' | |
2524 | - if n_elements(vcls) gt 0 then begin | |
2525 | - print, 'MRDFITS: Uses variable length arrays' | |
2526 | - endif | |
2527 | - endif | |
2528 | - | |
2529 | - status = 0 | |
2530 | - return | |
2531 | - | |
2532 | -end | |
2533 | - | |
2534 | -function mrdfits, file, extension, header, $ | |
2535 | - structyp = structyp, $ | |
2536 | - use_colnum = use_colnum, $ | |
2537 | - range = range, $ | |
2538 | - dscale = dscale, fscale=fscale, $ | |
2539 | - silent = silent, $ | |
2540 | - columns = columns, $ | |
2541 | - no_tdim = no_tdim, $ | |
2542 | - error_action = error_action, $ | |
2543 | - compress=compress, $ | |
2544 | - alias=alias, $ | |
2545 | - rows = rows, $ | |
2546 | - unsigned=unsigned, $ | |
2547 | - version=version, $ | |
2548 | - pointer_var=pointer_var, $ | |
2549 | - fixed_var=fixed_var, $ | |
2550 | - status=status, extnum = extnum | |
2551 | - | |
2552 | - compile_opt idl2 | |
2553 | - ; Let user know version if MRDFITS being used. | |
2554 | - if keyword_set(version) then begin | |
2555 | - print,'MRDFITS: Version '+mrd_version()+' Dec 12, 2007' | |
2556 | - endif | |
2557 | - | |
2558 | - ; | |
2559 | - ; Can't use keyword_set since default is 2, not 0. | |
2560 | - | |
2561 | - if n_elements(error_action) eq 0 then begin | |
2562 | - error_action = 2 | |
2563 | - endif | |
2564 | - | |
2565 | - on_error, error_action | |
2566 | - | |
2567 | - | |
2568 | - | |
2569 | - ; Check positional arguments. | |
2570 | - | |
2571 | - if n_params() le 0 or n_params() gt 3 then begin | |
2572 | - if keyword_set(version) then return, 0 | |
2573 | - print, 'MRDFITS: Usage' | |
2574 | - print, ' a=mrdfits(file/unit, [exten_no/exten_name, header], /version $' | |
2575 | - print, ' /fscale, /dscale, /unsigned, /use_colnum, /silent $' | |
2576 | - print, ' range=, rows= , structyp=, columns=, $' | |
2577 | - print, ' /pointer_var, /fixed_var, error_action=, status= )' | |
2578 | - return, 0 | |
2579 | - endif | |
2580 | - | |
2581 | - if n_params() eq 1 then extension = 0 | |
2582 | - | |
2583 | - ; Check optional arguments. | |
2584 | - ; | |
2585 | - ; *** Structure name *** | |
2586 | - | |
2587 | - if keyword_set(structyp) then begin | |
2588 | - sz = size(structyp) | |
2589 | - if sz[0] ne 0 then begin | |
2590 | - ; Use first element of array | |
2591 | - structyp = structyp[0] | |
2592 | - sz = size(structyp[0]) | |
2593 | - endif | |
2594 | - | |
2595 | - if sz[1] ne 7 then begin | |
2596 | - print, 'MRDFITS: stucture type must be a string' | |
2597 | - return, 0 | |
2598 | - endif | |
2599 | - endif | |
2600 | - | |
2601 | - ; *** Use column numbers not names? | |
2602 | - if not keyword_set(use_colnum) then use_colnum = 0 | |
2603 | - | |
2604 | - ; *** Get only a part of the FITS file. | |
2605 | - if N_elements(rows) GT 0 then begin | |
2606 | - range1 = min(rows,max=range2) | |
2607 | - range = [range1,range2] | |
2608 | - endif | |
2609 | - if keyword_set(range) then begin | |
2610 | - if n_elements(range) eq 2 then arange = range $ | |
2611 | - else if n_elements(range) eq 1 then arange = [0,range[0]-1] $ | |
2612 | - else if n_elements(range) gt 2 then arange = range[0:1] $ | |
2613 | - else if n_elements(range) eq 0 then arange = [-1,-1] | |
2614 | - | |
2615 | - endif else begin | |
2616 | - arange = [-1,-1] | |
2617 | - endelse | |
2618 | - | |
2619 | - arange = long(arange) | |
2620 | - | |
2621 | - ; Open the file and position to the appropriate extension then read | |
2622 | - ; the header. | |
2623 | - | |
2624 | - if (N_elements(file) GT 1 ) then begin | |
2625 | - print, 'MRDFITS: Vector input not supported' | |
2626 | - return, 0 | |
2627 | - endif | |
2628 | - | |
2629 | - inputUnit = 0 | |
2630 | - | |
2631 | - dtype = size(file,/type) | |
2632 | - if dtype gt 0 and dtype lt 4 then begin ;File unit number specified | |
2633 | - | |
2634 | - inputUnit = 1 | |
2635 | - unit = file | |
2636 | - | |
2637 | - if fxmove(unit,extension) lt 0 then begin | |
2638 | - return, -1 | |
2639 | - endif | |
2640 | - | |
2641 | - endif else begin ;File name specified | |
2642 | - unit = fxposit(file, extension, compress=compress, $ | |
2643 | - /readonly,extnum=extnum, errmsg= errmsg) | |
2644 | - | |
2645 | - if unit lt 0 then begin | |
2646 | - message, 'File access error',/CON | |
2647 | - if errmsg NE '' then message,errmsg,/CON | |
2648 | - status = -1 | |
2649 | - return, 0 | |
2650 | - endif | |
2651 | - endelse | |
2652 | - | |
2653 | - if eof(unit) then begin | |
2654 | - print,'MRDFITS: Extension past EOF' | |
2655 | - if inputUnit eq 0 then free_lun,unit | |
2656 | - status = -2 | |
2657 | - return, 0 | |
2658 | - endif | |
2659 | - | |
2660 | - mrd_hread, unit, header, status, SILENT = silent | |
2661 | - | |
2662 | - if status lt 0 then begin | |
2663 | - print, 'MRDFITS: Unable to read header for extension' | |
2664 | - if inputUnit eq 0 then free_lun,unit | |
2665 | - return, 0 | |
2666 | - endif | |
2667 | - | |
2668 | - ; If this is primary array then XTENSION will have value | |
2669 | - ; 0 which will be converted by strtrim to '0' | |
2670 | - | |
2671 | - xten = strtrim( fxpar(header,'XTENSION'), 2) | |
2672 | - if xten eq '0' or xten eq 'IMAGE' then type = 0 $ | |
2673 | - else if xten eq 'TABLE' then type = 1 $ | |
2674 | - else if xten eq 'BINTABLE' or xten eq 'A3DTABLE' then type = 2 $ | |
2675 | - else begin | |
2676 | - message, 'Unable to process extension type:', xten,/CON | |
2677 | - if inputUnit eq 0 then free_lun,unit | |
2678 | - status = -1 | |
2679 | - return, 0 | |
2680 | - endelse | |
2681 | - | |
2682 | - scaling = keyword_set(fscale) or keyword_set(dscale) | |
2683 | - | |
2684 | - if type eq 0 then begin | |
2685 | - | |
2686 | - ;*** Images/arrays | |
2687 | - | |
2688 | - mrd_image, header, arange, maxd, rsize, table, scales, offsets, $ | |
2689 | - scaling, status, silent=silent, unsigned=unsigned, $ | |
2690 | - rows= rows | |
2691 | - if status ge 0 and rsize gt 0 then begin | |
2692 | - mrd_read_image, unit, arange, maxd, rsize, table, rows = rows,$ | |
2693 | - status=status | |
2694 | - endif | |
2695 | - size = rsize | |
2696 | - endif else if type eq 1 then begin | |
2697 | - | |
2698 | - ;*** ASCII tables. | |
2699 | - | |
2700 | - mrd_ascii, header, structyp, use_colnum, $ | |
2701 | - arange, table, nbytes, nrows, nfld, rows=rows, $ | |
2702 | - typarr, posarr, lenarr, nullarr, fnames, fvalues, $ | |
2703 | - scales, offsets, scaling, status, silent=silent, $ | |
2704 | - columns=columns, alias=alias | |
2705 | - size = nbytes*nrows | |
2706 | - | |
2707 | - if status ge 0 and size gt 0 then begin | |
2708 | - | |
2709 | - ;*** Read data. | |
2710 | - mrd_read_ascii, unit, arange, nbytes, nrows, $ | |
2711 | - nfld, typarr, posarr, lenarr, nullarr, table, rows= rows | |
2712 | - | |
2713 | - ;*** Extract desired columns. | |
2714 | - if status ge 0 and keyword_set(columns) then $ | |
2715 | - mrd_columns, table, columns, fnames, fvalues, vcls, vtps, $ | |
2716 | - scales, offsets, scaling, structyp=structyp, silent=silent | |
2717 | - endif | |
2718 | - | |
2719 | - endif else begin | |
2720 | - | |
2721 | - ; *** Binary tables. | |
2722 | - | |
2723 | - mrd_table, header, structyp, use_colnum, $ | |
2724 | - arange, rsize, table, nrows, nfld, typarr, $ | |
2725 | - fnames, fvalues, vcls, vtpes, scales, offsets, scaling, status, $ | |
2726 | - silent=silent, columns=columns, no_tdim=no_tdim, $ | |
2727 | - alias=alias, unsigned=unsigned, rows = rows | |
2728 | - | |
2729 | - size = nfld*(arange[1] - arange[0] + 1) | |
2730 | - if status ge 0 and size gt 0 then begin | |
2731 | - | |
2732 | - ;*** Read data. | |
2733 | - mrd_read_table, unit, arange, rsize, rows = rows, $ | |
2734 | - structyp, nrows, nfld, typarr, table | |
2735 | - | |
2736 | - if status ge 0 and keyword_set(columns) then begin | |
2737 | - | |
2738 | - ;*** Extract desired columns. | |
2739 | - mrd_columns, table, columns, fnames, fvalues, $ | |
2740 | - vcls, vtpes, scales, offsets, scaling, structyp=structyp, $ | |
2741 | - silent=silent | |
2742 | - | |
2743 | - endif | |
2744 | - | |
2745 | - | |
2746 | - if status ge 0 and n_elements(vcls) gt 0 then begin | |
2747 | - | |
2748 | - ;*** Get variable length columns | |
2749 | - mrd_read_heap, unit, header, arange, fnames, fvalues, $ | |
2750 | - vcls, vtpes, table, structyp, scaling, scales, offsets, status, $ | |
2751 | - silent=silent, pointer_var=pointer_var, fixed_var=fixed_var, rows= rows | |
2752 | - | |
2753 | - endif else begin | |
2754 | - | |
2755 | - ; Skip remainder of last data block | |
2756 | - sz = long64(fxpar(header, 'NAXIS1'))* $ | |
2757 | - long64(fxpar(header,'NAXIS2')) + $ | |
2758 | - long64(fxpar(header, 'PCOUNT')) | |
2759 | - skipB = 2880 - sz mod 2880 | |
2760 | - if (skipB ne 2880) then mrd_skip, unit, skipB | |
2761 | - endelse | |
2762 | - | |
2763 | - endif | |
2764 | - | |
2765 | - endelse | |
2766 | - | |
2767 | - | |
2768 | - ; Don't tie up a unit number that we allocated in this routine. | |
2769 | - if unit gt 0 and inputUnit eq 0 then begin | |
2770 | - free_lun, unit | |
2771 | - endif | |
2772 | - | |
2773 | - if status ge 0 and scaling and size gt 0 then begin | |
2774 | - w = where(scales ne 1.d0 or offsets ne 0.0d0) | |
2775 | - | |
2776 | - ;*** Apply scalings. | |
2777 | - if w[0] ne -1 then mrd_scale, type, scales, offsets, table, header, $ | |
2778 | - fnames, fvalues, 1+arange[1]-arange[0], structyp=structyp, $ | |
2779 | - dscale=dscale, silent=silent | |
2780 | - endif | |
2781 | - | |
2782 | - ; All done. Check the status to see if we ran into problems on the way. | |
2783 | - | |
2784 | - if status ge 0 then return, table else return,0 | |
2785 | - | |
2786 | -end |