phangs_make_jwst_images.pro
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PRO phangs_make_jwst_images,source_name=source_name,save=save,show_images=show_images,nostop=nostop,resolution_filter=resolution_filter,help=help
;+
; NAME:
; phangs_make_jwst_images
; PURPOSE:
; makes JWST images usable by the Phangs ISRF project
; CATEGORY:
; Dustem Phangs
; CALLING SEQUENCE:
; phangs_make_jwst_images[,source_name=][,/save][,/show_images][,/nostop]
; INPUTS:
; None
; OPTIONAL INPUT PARAMETERS:
; source_name : source name (default = 'ngc0628')
; resolution_filter : if set makes images at this resolution (default none)
; OUTPUTS:
; None
; OPTIONAL OUTPUT PARAMETERS:
; None
; ACCEPTED KEY-WORDS:
; help = If set, print this help
; save = If set, save result
; show_images= if set, show images
; nostop = if set, does not stop
; COMMON BLOCKS:
; None
; SIDE EFFECTS:
; Files written:
; _ref_header.sav
; _jwst_images.sav
; RESTRICTIONS:
; None
; PROCEDURE:
; input JWST images are asumed to be in units of MJy/sr
; EXAMPLES
; phangs_make_jwst_images,source_name='ngc0628',/save,/show,/nostop
; MODIFICATION HISTORY:
; Written by J.-Ph. Bernard (2023)
; Evolution details on the DustEMWrap gitlab.
; See http://dustemwrap.irap.omp.eu/ for FAQ and help.
;-
IF keyword_set(help) THEN BEGIN
doc_library,'phangs_make_jwst_images'
goto,the_end
ENDIF
use_source_name='ngc0628'
IF keyword_set(source_name) THEN use_source_name=source_name
pdp_define_la_common
dustem_init
;window,0
obp=[1.1,0,1.15,1]
win=0L
;data_dir='/Volumes/PILOT_FLIGHT1/PHANGS-JWST/DR1/'
;data_dir=!phangs_data_dir+'/phangs_drive/PHANGS-JWST/DR1/'
;/data/projects/phangs/phangs_drive/Archive/PHANGS_JWST/DR1/ngc0628/f1000w_psf_matched
data_dir=!phangs_data_dir+'/phangs_drive/Archive/PHANGS_JWST/DR1/'+use_source_name+'/f300m_psf_matched/'
save_data_dir=!phangs_data_dir+'/ISRF/WORK/'
;========== get JWST reference header
file=data_dir+use_source_name+'_nircam_lv3_f300m_i2d_anchor_atgauss1.fits'
st_info=file_info(file)
IF st_info.exists NE 1 THEN BEGIN
message,'Could not find file '+file,/continue
stop
ENDIF
d=mrdfits(file,1,h)
ind=where(finite(d) NE 1,count)
IF count NE 0 THEN d[ind]=la_undef()
print,sxpar(h,'CDELT1')
href=cd2astro_header(h)
sxaddpar,href,'EQUINOX',2000.
IF keyword_set(show_images) THEN BEGIN
window,win & win=win+1
image_cont20,d,href,/square,imrange=[-0.1,5],image_color_table='jpbloadct',/silent,tit=tit
ENDIF
reso_str=''
IF keyword_set(resolution_filter) THEN BEGIN
reso_str='_'+resolution_filter
data_reso=dustem_filter2reso(dustem_filter_names2filters('F300M'))
final_reso=dustem_filter2reso(resolution_filter)
dd=degrade_res(d,href,data_reso,final_reso,hout)
href=hout
ENDIF
IF keyword_set(show_images) THEN BEGIN
window,win & win=win+1
image_cont20,dd,href,/square,imrange=[-0.1,5],image_color_table='jpbloadct',/silent,tit=tit
ENDIF
;=== save reference header
IF keyword_set(save) THEN BEGIN
save_file=save_data_dir+use_source_name+'_ref_header'+reso_str+'.sav'
save,href,file=save_file
message,'Saved '+save_file,/continue
ENDIF
Nx=sxpar(href,'NAXIS1')
Ny=sxpar(href,'NAXIS2')
filters_names=['F200W','F300M','F335M','F360M','F0770W','F1000W','F1130W','F2100W']
filters_names2=['F200W','F300M','F335M','F360M','F770W','F1000W','F1130W','F2100W'] ;This is to be used for file names
instrus=dustem_filter2instru(dustem_filter_names2filters(filters_names))
filters=dustem_filter_names2filters(filters_names)
Nfilters=n_elements(filters)
jwst_images=fltarr(Nx,Ny,2,Nfilters)
IF not keyword_set(nostop) THEN stop
;========== Make JWST images
FOR i=0L,Nfilters-1 DO BEGIN
data_dir=!phangs_data_dir+'/phangs_drive/Archive/PHANGS_JWST/DR1/'+use_source_name+'/'+strlowcase(filters_names2[i])+'_psf_matched/'
file=data_dir+use_source_name+'_'+strlowcase(instrus[i])+'_lv3_'+strlowcase(filters_names2[i])+'_i2d_anchor_atgauss1.fits'
st_info=file_info(file)
IF st_info.exists NE 1 THEN BEGIN
message,'requested file '+file+' does not exist',/info
stop
ENDIF
d=mrdfits(file,0,h0)
d=mrdfits(file,1,h)
sxaddpar,h,'EQUINOX',2000.
ind=where(finite(d) NE 1,count)
IF count NE 0 THEN d[ind]=la_undef()
IF keyword_set(resolution_filter) THEN BEGIN
data_reso=dustem_filter2reso(dustem_filter_names2filters(filters_names[i]))
final_reso=dustem_filter2reso(resolution_filter)
d=degrade_res(d,h,data_reso,final_reso,hout)
h=hout
ENDIF
IF sxpar(h,'NAXIS1') NE Nx OR sxpar(h,'NAXIS2') NE Ny THEN BEGIN
d=project2(h,d,href,/silent)
ENDIF
jwst_images[*,*,0,i]=d
;i=i+1
print,sxpar(h,'EXTNAME')
filter_name=sxpar(h0,'FILTER')
print,filter_name
tit=source_name+' '+filter_name
IF keyword_set(show_images) THEN BEGIN
window,win & win=win+1
image_cont20,d,href,/square,imrange=[-0.1,5],image_color_table='jpbloadct',/silent,tit=tit
IF not keyword_set(nostop) THEN stop
ENDIF
ENDFOR
;stop
;===== Invent variances (will have to do better)
perc_error=5./100.
jwst_images[*,*,1,*]=la_power(la_mul(jwst_images[*,*,0,*],perc_error),2) ;assumed intensity variance
;=== check for null variances
ind=where(jwst_images[*,*,1,*] EQ 0.,count)
IF count NE 0 THEN BEGIN
message,'There are null variances ...',/continue
stop
ENDIF
; ;===== WCO map:
; file=NH_data_dir+use_source_name+'_12m+7m+tp_co21_broad_mom0.fits'
; d=readfits(file,h)
; ;sxaddpar,h,'CTYPE1','RA---TAN'
; ;sxaddpar,h,'CTYPE2','RA---TAN'
; sxaddpar,h,'EQUINOX',2000.
; ind=where(finite(d) NE 1,count)
; IF count NE 0 THEN d[ind]=la_undef()
; IF sxpar(h,'NAXIS1') NE Nx OR sxpar(h,'NAXIS2') NE Ny THEN WCO=project2(h,d,href,/silent) ELSE WCO=d
; fact=4.e20/1.e21
; NHCO=la_mul(WCO,fact) ;NH from CO in 1e21 H/cm2
; tit=source_name+' '+'NHCO [1e21 H/cm2]'
; IF keyword_set(show_images) THEN BEGIN
; window,win & win=win+1
; image_cont20,NHCO,href,/square,imrange=[-0.5,10],image_color_table='jpbloadct',/silent,tit=tit
; IF not keyword_set(nostop) THEN stop
; ENDIF
IF keyword_set(save) THEN BEGIN
save_file=save_data_dir+use_source_name+'_jwst_images'+reso_str+'.sav'
save,jwst_images,filters,href,file=save_file
message,'Saved '+save_file,/continue
ENDIF
the_end:
END