FileWriterCDF.cpp
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#include "FileWriterCDF.h"
#include <cstring>
#include <fstream>
#include <cstdlib>
#include "../Common/Toolbox.h"
#include "../TimeManager/TimeManager.h"
using namespace TREPS::Common;
using namespace TREPS::TimeManager;
namespace TREPS
{
namespace File
{
FileWriterCDFClass::FileWriterCDFClass(void):FileWriterAbstractClass(), cdfid(0), filePath("")
{
memset(&cdfbuffer,0,(CDF_STATUSTEXT_LEN+1)*sizeof(char));
}
FileWriterCDFClass::~FileWriterCDFClass(void)
{
this->close();
}
bool FileWriterCDFClass::init(const char *file_path, const map<string,string> *attributes)
{
if (!this->close())
{
LOG4CXX_ERROR(this->app->getLog()->getPtr(),"Cannot close previous document");
return false;
}
this->filePath = file_path;
//
string tmpPath = this->filePath;
tmpPath += ".cdf";
//delete previous file (CDFcreateCDF no overwrite existing file)
if (isFileExist(tmpPath.c_str()))
deleteFile(tmpPath.c_str());
//CDFcreateCDF add automatically ".cdf" extension
CDFstatus status = CDFcreateCDF((char*)this->filePath.c_str(),&this->cdfid);
if (status != CDF_OK)
{
LOG4CXX_ERROR(this->app->getLog()->getPtr(),"Cannot create file " << file_path);
CDFerror (status, this->cdfbuffer);
return false;
}
//write attributes
for (map<string,string>::const_iterator att = attributes->begin(); att != attributes->end(); ++att)
{
if (!this->addAttribute(att->first.c_str(), att->second.c_str(), GLOBAL_SCOPE))
{
LOG4CXX_ERROR(this->app->getLog()->getPtr(),"Error to add global attribut");
return false;
}
}
return true;
}
bool FileWriterCDFClass::writeData(const DataRecordListClass *data, t_TimeFormat timeFormat,
const char *timePattern, const t_FieldList *fields)
{
//write time fields
if (timeFormat != TF_NONE)
{
long timeVarNum;
t_Field timeField;
timeField.id = "TREPS_TIME";
timeField.type = FT_TIME;
timeField.dims.clear();
timeField.timeformat = timeFormat;
timeField.timepattern = timePattern;
if (!this->writeField(&timeField, data, timeVarNum))
{
LOG4CXX_ERROR(this->app->getLog()->getPtr(),"Error to create time field");
return false;
}
}
//write data fields
if (!fields->empty())
{
for (t_FieldList::const_iterator field = fields->begin(); field != fields->end(); ++field)
{
long varNum;
if (!this->writeField(&(*field), data, varNum))
{
LOG4CXX_ERROR(this->app->getLog()->getPtr(),"Error to create field : " << (*field).id);
return false;
}
}
}
return true;
}
bool FileWriterCDFClass::writeField(const t_Field *field, const DataRecordListClass *data, long &varNum)
{
long dataType;
long numElts;
//create field
CDFstatus status;
if (!this->getCDFVarTypeDef(field, data, dataType, numElts))
{
LOG4CXX_ERROR(this->app->getLog()->getPtr(),"Error to get variable definition : " << field->id);
return false;
}
long numDims = field->dims.size();
if (numDims == 0)
{
//for 0-dimensional zVariables this argument is ignored (but must be present)
long dimSizes[1] = {0};
long recVary = {VARY};
long dimVarys[1] = {VARY};
status = CDFcreatezVar (this->cdfid, field->id.c_str(), dataType, numElts, 0L, dimSizes, recVary, dimVarys, &varNum);
}
else
{
long dimSizes[numDims];
long recVary = {VARY};
long dimVarys[numDims];
int index = 0;
for (t_DimensionList::const_iterator dim = field->dims.begin(); dim != field->dims.end(); ++dim)
{
dimSizes[index] = (*dim).size;
dimVarys[index] = VARY;
}
status = CDFcreatezVar (this->cdfid, field->id.c_str(), dataType, numElts, numDims, dimSizes, recVary, dimVarys, &varNum);
}
if (status != CDF_OK)
{
LOG4CXX_ERROR(this->app->getLog()->getPtr(),"Error to create field : " << field->id);
return false;
}
//write data
if (!this->writeFieldData(field, data, varNum, dataType, numElts))
{
LOG4CXX_ERROR(this->app->getLog()->getPtr(),"Error to write field data : " << field->id);
return false;
}
//add field attributes
for (map<string,string>::const_iterator att = field->attributes.begin(); att != field->attributes.end(); ++att)
{
if (att->second.empty())
continue;
if (!this->addAttribute(att->first.c_str(), att->second.c_str(), VARIABLE_SCOPE, varNum))
{
LOG4CXX_ERROR(this->app->getLog()->getPtr(),"Error to add variable attribut");
return false;
}
}
return true;;
}
bool FileWriterCDFClass::writeFieldData(const t_Field *field, const DataRecordListClass *data, long varNum, long cdfType, long numElts)
{
CDFstatus status;
DataRecordClass *crtRecord = data->getFirstRecord();
int recNum = 0;
//create buffer use to set value
long dataSize;
status = CDFgetDataTypeSize(cdfType,&dataSize);
if (status != CDF_OK)
return false;
while (crtRecord != NULL)
{
if (field->dims.empty())
{
//scalar
void *buffer = malloc(dataSize*numElts);
memset(buffer,0,dataSize*numElts);
if (!this->convertData(field, crtRecord, field->id.c_str(), cdfType, numElts, buffer))
{
free(buffer);
return false;
}
status = CDFputzVarRecordData(this->cdfid, varNum, recNum, buffer);
if (status != CDF_OK)
{
free(buffer);
return false;
}
free(buffer);
}
else
{
//no scalar
int nbValByRec = 1;
for (t_DimensionList::const_iterator dim = field->dims.begin(); dim != field->dims.end(); ++dim)
nbValByRec *= (*dim).size;
void *buffer = malloc(nbValByRec * dataSize * numElts);
memset(buffer,0,nbValByRec * dataSize * numElts);
void *pos = buffer;
for (int i = 0; i < nbValByRec; ++i)
{
//value key in data record
string key = field->id;
key += "_TREPSID";
key += intToStr(i);
//convert data for cdf
if (!this->convertData(field, crtRecord, key.c_str(), cdfType, numElts, pos))
{
free(buffer);
return false;
}
pos = (void *)((long)pos + (dataSize * numElts));
}
status = CDFputzVarRecordData(this->cdfid, varNum, recNum, buffer);
free(buffer);
}
++recNum;
crtRecord = crtRecord->getNextRecord();
}
return true;
}
bool FileWriterCDFClass::getCDFVarTypeDef(const t_Field *field, const DataRecordListClass *data, long &cdfType, long &numElts)
{
//get time manager instance
TimeManagerClass *timeMgr = TimeManagerClass::getInstance();
//always 1 except for var type CDF_CHAR
numElts = 1;
//compute nb val by record
int nbValByRec = 1;
for (t_DimensionList::const_iterator dim = field->dims.begin(); dim != field->dims.end(); ++dim)
nbValByRec *= (*dim).size;
//
switch (field->type)
{
case FT_UNKNOWN :
{
cdfType = CDF_CHAR;
//get numElts ie max string size
if (nbValByRec == 1)
numElts = data->getMaxStringValueSize(field->id.c_str());
else
{
for (int i = 0; i < nbValByRec; ++i)
{
string crtId = field->id;
crtId += "_TREPSID";
crtId += intToStr(i);
int crtNumElts = data->getMaxStringValueSize(crtId.c_str());
numElts = ((crtNumElts > numElts) ? crtNumElts : numElts);
}
}
break;
}
case FT_FLOAT :
cdfType = CDF_FLOAT;
break;
case FT_DOUBLE :
cdfType = CDF_DOUBLE;
break;
case FT_SHORT :
cdfType = CDF_INT2;
break;
case FT_INT :
cdfType = CDF_INT4;
break;
case FT_LONG :
cdfType = CDF_INT8;
break;
case FT_TIME :
{
switch (field->timeformat)
{
case TF_NONE :
return false;
case TF_PATTERN :
cdfType = CDF_CHAR;
timeMgr->setCurrentPattern(field->timepattern.c_str());
numElts = timeMgr->getCurrentPatternSize();
break;
case TF_TIMESTAMP :
cdfType = CDF_INT4;
break;
case TF_DECIMAL :
cdfType = CDF_DOUBLE;
break;
case TF_EPOCH :
cdfType = CDF_EPOCH;
break;
case TF_TT2000 :
cdfType = CDF_TIME_TT2000;
break;
case TF_DDTIME :
cdfType = CDF_CHAR;
numElts = 16;
break;
default :
return false;
}
break;
}
default :
return false;
}
return true;
}
bool FileWriterCDFClass::convertData(const t_Field *field, DataRecordClass *record, const char *key, long cdfType, long numElts, void *buffer)
{
//get time manager instance
TimeManagerClass *timeMgr = TimeManagerClass::getInstance();
CDFstatus status;
long dataSize;
status = CDFgetDataTypeSize(cdfType,&dataSize);
if (status != CDF_OK)
return false;
switch (cdfType)
{
case CDF_CHAR :
{
string val;
if (field->type != FT_TIME)
val = record->getValue(key);
else
{
t_Time time = record->getTime();
val = timeMgr->to_string(time, field->timeformat, field->timepattern.c_str());
}
int valLen = val.size();
if (valLen > numElts)
return false;
memcpy(buffer,val.c_str(),valLen * dataSize);
return true;
}
case CDF_FLOAT :
{
float f = record->getFloatValue(key);
memcpy(buffer,&f,sizeof(float));
return true;
}
case CDF_DOUBLE :
case CDF_EPOCH :
{
double d;
if (field->type != FT_TIME)
d = record->getDoubleValue(key);
else
{
t_Time time = record->getTime();
switch (field->timeformat)
{
case TF_DECIMAL :
d = timeMgr->to_DECIMAL(time);
break;
case TF_EPOCH :
d = timeMgr->to_EPOCH(time);
break;
default :
//error
d = 0.;
}
}
memcpy(buffer,&d,sizeof(double));
return true;
}
case CDF_INT2 :
{
short int s = record->getShortValue(key);
memcpy(buffer,&s,sizeof(short int));
return true;
}
case CDF_INT4 :
{
long int i;
if (field->type != FT_TIME)
i = record->getLongValue(key);
else
{
t_Time time = record->getTime();
switch (field->timeformat)
{
case TF_TIMESTAMP :
i = timeMgr->to_TIMESTAMP(time);
break;
default :
//error
i = 0;
}
}
memcpy(buffer,&i,sizeof(long int));
return true;
}
case CDF_INT8 :
case CDF_TIME_TT2000 :
{
long long int l;
if (field->type != FT_TIME)
l = record->getLongLongValue(key);
else
{
t_Time time = record->getTime();
switch (field->timeformat)
{
case TF_TT2000 :
l = timeMgr->to_TT2000(time);
break;
default :
//error
l = 0;
}
}
memcpy(buffer,&l,sizeof(long long int));
return true;
}
}
return false;
}
bool FileWriterCDFClass::addAttribute(const char *attName, const char *attVal, long scope, long varNum)
{
if (!this->isOpened())
{
LOG4CXX_ERROR(this->app->getLog()->getPtr(),"File not initialized - Cannot create general description attribute");
return false;
}
CDFstatus status;
long attNum = CDFgetAttrNum(this->cdfid, (char*)attName);
if (attNum < 0)
{
status = CDFcreateAttr(this->cdfid, attName, scope, &attNum);
if (status != CDF_OK)
{
LOG4CXX_ERROR(this->app->getLog()->getPtr(),"Cannot create description attribute " << attName);
return false;
}
}
if (scope == GLOBAL_SCOPE)
status = CDFputAttrgEntry (this->cdfid, attNum, 0, CDF_CHAR, strlen(attVal), (void *)attVal);
else
status = CDFputAttrzEntry (this->cdfid, attNum, varNum, CDF_CHAR, strlen(attVal), (void *)attVal);
if (status != CDF_OK)
{
LOG4CXX_ERROR(this->app->getLog()->getPtr(),"Cannot put attribute value " << attName);
return false;
}
return true;
}
bool FileWriterCDFClass::save(void)
{
if (!this->isOpened() || this->filePath.compare("") == 0)
{
LOG4CXX_ERROR(this->app->getLog()->getPtr(),"Cannot save file");
return false;
}
string tmpPath = this->filePath;
tmpPath += ".cdf";
if (!isFileExist(tmpPath.c_str()))
{
LOG4CXX_ERROR(this->app->getLog()->getPtr(),"Cannot save file");
return false;
}
//we need to close the cdf file before to copy it
string newPath = this->filePath;
this->close();
//copy tmp file to filePath
ifstream source(tmpPath.c_str(), ios::binary);
if (!source.good())
{
LOG4CXX_ERROR(this->app->getLog()->getPtr(),"Cannot save file");
return false;
}
ofstream dest(newPath.c_str(), ios::binary);
dest << source.rdbuf();
source.close();
dest.close();
return true;
}
bool FileWriterCDFClass::close(void)
{
if (this->isOpened())
{
CDFstatus status = CDFcloseCDF(this->cdfid);
if (status != CDF_OK)
{
LOG4CXX_ERROR(this->app->getLog()->getPtr(),"Error detected during the close of the CDF file");
}
this->cdfid = 0;
this->filePath = "";
return (status == CDF_OK);
}
return !this->isOpened();
}
bool FileWriterCDFClass::isOpened(void)
{
return (this->cdfid > 0);
}
}
}