tools.c
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/*******************************************************************************
*
* tools.c - 2014/01/29
*
* Some specific functions requiered for AMDA converter
*
*/
#include <stdio.h>
#include <string.h>
#include "tools.h"
#include "netcdf.h"
#include "cdf.h"
#ifndef TRUE
#define TRUE 1
#define FALSE (! TRUE)
#endif
#define VERSION_MIN "3.4.0"
#define START_TIME "StartTime"
#define STOP_TIME "StopTime"
#define TIME_VAR "Time"
extern CDFid id; /* CDF file identifier */
extern int ncid; /* netCDF file identifier */
extern long nZvars; /* Number of CDF zVariables */
/*******************************************************************************
*
* Check version of CDFlib greated or equal to 3.5 (needed for TT2000)
*/
int check_version (void)
{
long version, release, increment;
char subincrement;
int status;
char str_version [30];
status = CDFgetLibraryVersion (& version, & release, & increment, & subincrement);
if (status < CDF_OK) {
printf ("ERROR : unable to get CDFlib version\n");
goto EXIT;
}
sprintf (str_version, "%d.%d.%d-%c", version, release, increment, subincrement);
printf ("CDFlib version : %s\n", str_version);
if (strcmp (str_version, VERSION_MIN) < 0) {
printf ("ERROR : version %s < %s", str_version, VERSION_MIN);
}
EXIT: return status;
}
/*******************************************************************************
*
* Check if the given year is a leap one
*/
int leap_year (int year)
{
if ((year % 400) == 0) return TRUE;
if ((year % 100) == 0) return FALSE;
if ((year % 4) == 0) return TRUE;
return FALSE;
}
/*******************************************************************************
*
* Convert an ISO 8601 date time to a DD Time string
*/
char * isotime_to_dd_time (char * input)
{
static char output [DD_TIME_STRING_LEN + 1];
int i, count, ddd;
int yy, mm, dd, h, m, s, ms;
int duration[] = { 0, 31, 28, 31, 30, 31, 30, 31, 31, 30, 31, 30, 31 };
count = sscanf (input, "%d-%d-%dT%d:%d:%d.%3d", & yy, & mm, & dd, & h, & m, & s, &ms);
if (count != 7) {
printf ("Unexpected time format: %s\n", input);
strcpy (output, "ERROR ");
goto EXIT;
}
if (leap_year (yy)) duration [2] = 29;
ddd = dd - 1; /* Jan-01 : 0 => ddd in [0, 366[ */
for (i = 1; i < mm; i++) ddd += duration [i];
sprintf (output, "%04.4d%03.3d%02.2d%02.2d%02.2d%03.3d",
yy, ddd, h, m, s, ms);
EXIT: return output;
}
/*******************************************************************************
*
* Parse variables metadata to define time variable ID :
*
* ID of a variable that appears in DEPEND_0 attribute of other variables
*/
char * get_time_variable()
{
long timeVarId = -1;
long varId;
CDFstatus status;
long attrNum = CDFgetAttrNum (id, "DEPEND_0");
char * timeVarName = NULL;
if (attrNum < CDF_OK) {
printf ("ERROR : no DEPEND_0 attribute\n");
attrNum = CDFgetAttrNum (id, "Depend_0");
if (attrNum < CDF_OK) {
printf ("ERROR : no Depend_0 attribute\n");
// goto EXIT;
goto NO_DEPEND_0;
}
}
for (varId = 0; varId < nZvars; varId++) {
char name [CDF_VAR_NAME_LEN256+1];
long dataType;
long numElems;
char buffer [CDF_VAR_NAME_LEN256+1];
status = CDFgetzVarName (id, varId, name);
if (status != CDF_OK)
cdf_status_handler (status, "Get var name");
status = CDFinquireAttrzEntry (id, attrNum, varId, & dataType, & numElems);
if (status == NO_SUCH_ENTRY) continue;
if (status != CDF_OK)
cdf_status_handler (status, "Get DEPEND_0");
else {
if (dataType == CDF_CHAR || dataType == CDF_UCHAR) {
status = CDFgetAttrzEntry (id, attrNum, varId, buffer);
buffer [numElems] = 0;
if (timeVarName == NULL) {
timeVarName = strdup (buffer);
}
else if (strcmp (timeVarName, buffer) != 0) {
printf ("WARNING : Search time variable conflict between %s and %s\n %s is taken as Time\n",
timeVarName,
buffer,
timeVarName);
// EB: select the first time variable
// timeVarName = NULL;
// goto EXIT;
}
}
}
}
if (timeVarName != NULL)
printf ("Identified time variable : %s\n", timeVarName);
EXIT: return timeVarName;
NO_DEPEND_0 : for (varId = 0; varId < nZvars; varId++) {
char name [CDF_VAR_NAME_LEN256+1];
long dataType;
long numElems;
long numDims, recVary;
long dimSizes [CDF_MAX_DIMS];
long dimVarys [CDF_MAX_DIMS];
status = CDFgetzVarName (id, varId, name);
if (status != CDF_OK)
cdf_status_handler (status, "Get var name");
status = CDFinquirezVar (id, varId, name, & dataType, & numElems,
& numDims, dimSizes, & recVary, dimVarys);
if (status != CDF_OK) cdf_status_handler (status);
if ( dataType == CDF_EPOCH ) {
timeVarName = strdup (name);
printf ("Identified time variable : %s\n", timeVarName);
break;
}
}
return timeVarName;
}
/*******************************************************************************
*
* Compute time coverage (DD_TIME strings) of a currently opened CDF file
*/
int get_file_coverage (char * start_coverage, char * stop_coverage)
{
int error = -1;
long varId = -1;
CDFstatus status;
char varName [CDF_VAR_NAME_LEN256+1];
long dataType, numElems, numDims, recVary, numRecs;
long dimSizes [CDF_MAX_DIMS];
long dimVarys [CDF_MAX_DIMS];
long indices [CDF_MAX_DIMS];
double d_buffer [2];
long long l_buffer [2];
char * timeVar = NULL;
char str1 [EPOCH16_4_STRING_LEN+1];
char str2 [EPOCH16_4_STRING_LEN+1];
strcpy (start_coverage, "");
strcpy (stop_coverage, "");
timeVar = get_time_variable ();
if (timeVar == NULL) {
printf ("Error : no time variable identified\n");
goto EXIT;
}
varId = CDFvarNum (id, timeVar);
if (varId == -1) {
printf ("Error : no time variable identified\n");
goto EXIT;
}
status = CDFinquirezVar (id, varId,
varName,
& dataType,
& numElems,
& numDims,
dimSizes,
& recVary,
dimVarys);
if (status != CDF_OK) cdf_status_handler (status, "CDF inquire zVar");
if (recVary != VARY) {
printf ("ERROR : variable %s not record varying\n", varName);
goto EXIT;
}
if (numDims > 1) {
printf ("Error : variable %s numDims > 1\n", varName);
goto EXIT;
}
status = CDFgetzVarNumRecsWritten (id, varId, & numRecs);
if (status != CDF_OK) cdf_status_handler (status, "CDF get zVar num recs");
indices [0] = 0;
indices [1] = 0;
indices [3] = 0;
switch (dataType) {
case CDF_EPOCH:
status = CDFgetzVarData (id, varId, 0L, indices, d_buffer);
encodeEPOCH4 (d_buffer [0], str1);
status = CDFgetzVarData (id, varId, numRecs -1, indices, d_buffer);
encodeEPOCH4 (d_buffer [0], str2);
break;
case CDF_EPOCH16:
status = CDFgetzVarData (id, varId, 0L, indices, d_buffer);
encodeEPOCH16_4 (d_buffer, str1);
status = CDFgetzVarData (id, varId, numRecs -1, indices, d_buffer);
encodeEPOCH16_4 (d_buffer, str2);
break;
case CDF_TIME_TT2000:
status = CDFgetzVarData (id, varId, 0L, indices, l_buffer);
encodeTT2000 (l_buffer [0], str1, 3);
status = CDFgetzVarData (id, varId, numRecs -1, indices, l_buffer);
encodeTT2000 (l_buffer [0], str2, 3);
break;
default:
printf ("Error : variable %d is not a Time variable\n");
goto EXIT;
}
strcpy (start_coverage, isotime_to_dd_time (str1));
strcpy (stop_coverage, isotime_to_dd_time (str2));
error = 0;
EXIT: return error;
}
#define NDIM 2
/*******************************************************************************
*
* Set file time coverage metadata
*/
int set_file_time_coverage ()
{
int error = 0;
char start_time [DD_TIME_STRING_LEN + 1];
char stop_time [DD_TIME_STRING_LEN + 1];
int time_dim;
int start_id, stop_id;
int nc_status = NC_NOERR;
size_t start [NDIM];
size_t count [NDIM];
error = get_file_coverage (start_time, stop_time);
if (error != 0) goto EXIT;
printf ("CDF time coverage : %s - %s\n", start_time, stop_time);
nc_status = nc_def_dim (ncid, "TimeLength", DD_TIME_STRING_LEN, & time_dim);
if (nc_status != NC_NOERR) goto EXIT;
nc_status = nc_def_var (ncid, START_TIME, NC_CHAR, 1, & time_dim, & start_id);
if (nc_status != NC_NOERR) goto EXIT;
nc_status = nc_def_var (ncid, STOP_TIME, NC_CHAR, 1, & time_dim, & stop_id);
if (nc_status != NC_NOERR) goto EXIT;
start [0] = 0;
count [0] = DD_TIME_STRING_LEN;
nc_enddef (ncid);
nc_status = nc_put_vara_text (ncid, start_id, start, count, start_time);
if (nc_status != NC_NOERR) goto EXIT;
nc_status = nc_put_vara_text (ncid, stop_id, start, count, stop_time);
if (nc_status != NC_NOERR) goto EXIT;
EXIT: printf ("NC status = %d\n", nc_status);
return error;
}
/*******************************************************************************
*
* Rename time_variable to "Time" (necessary for AMDA DD server usage)
*/
int rename_time_variable ()
{
int error = -1;
char * timeVar = NULL;
int varId;
int nc_status;
timeVar = get_time_variable ();
if (timeVar == NULL) {
printf ("ERROR : no time variable identified\n");
goto EXIT;
}
nc_status = nc_redef (ncid);
if (nc_status != NC_NOERR) goto EXIT;
nc_status = nc_inq_varid (ncid, timeVar, & varId);
if (nc_status != NC_NOERR) goto EXIT;
nc_status = nc_rename_var (ncid, varId, TIME_VAR);
if (nc_status != NC_NOERR) goto EXIT;
nc_status = nc_enddef (ncid);
if (nc_status != NC_NOERR) goto EXIT;
error = 0;
EXIT: return error;
}