epntap.php
9.83 KB
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
74
75
76
77
78
79
80
81
82
83
84
85
86
87
88
89
90
91
92
93
94
95
96
97
98
99
100
101
102
103
104
105
106
107
108
109
110
111
112
113
114
115
116
117
118
119
120
121
122
123
124
125
126
127
128
129
130
131
132
133
134
135
136
137
138
139
140
141
142
143
144
145
146
147
148
149
150
151
152
153
154
155
156
157
158
159
160
161
162
163
164
165
166
167
168
169
170
171
172
173
174
175
176
177
178
179
180
181
182
183
184
185
186
187
188
189
190
191
192
193
194
195
196
197
198
199
200
201
202
203
204
205
206
207
208
209
210
211
212
213
214
215
216
217
218
219
220
221
222
223
224
225
226
227
228
229
230
231
232
233
234
235
236
237
238
239
240
241
242
243
244
245
246
247
248
249
250
251
252
253
<?php
include(realpath(dirname(__FILE__) . "/config.php"));
include(CLASSPATH . "VOTableMgr.php");
$action = preg_replace("/[^a-zA-Z]+/", "", filter_var($_GET['action'], FILTER_SANITIZE_STRING));
switch ($action) {
case 'resolver':
$response = resolver();
break;
case 'getServices':
$response = getServices();
break;
case 'updateNbResults':
$response = updateNbResults();
break;
case 'getGranules':
$response = getGranules();
break;
default:
$response = ['success' => false, 'msg' => 'Unknown action: ' . $action];
break;
}
echo json_encode($response);
function getParams($paramNames, $default=null) {
$params = [];
foreach($paramNames as $paramName) {
if(array_key_exists($paramName, $_GET)) {
$params[$paramName] = filter_var($_GET[$paramName], FILTER_SANITIZE_STRING, FILTER_FLAG_STRIP_LOW);
} else {
$params[$paramName] = $default;
}
}
return $params;
}
function resolver() {
$input = filter_var($_GET['input'], FILTER_SANITIZE_URL);
$words = preg_split("/ ?[;,] ?+/", $input);
$lastWord = trim(array_pop($words));
$firstsWords = implode(', ', $words);
$resolver_url = "http://voparis-registry.obspm.fr/ssodnet/1/autocomplete?q=%22$lastWord%22";
$response = ['success' => true, 'metaData' => ['root' => 'data', 'messageProperty' => 'msg']];
$content = file_get_contents($resolver_url);
if($content) {
$result = json_decode($content, true);
$targets = array();
foreach($result['hits'] as $e) {
$aliases = '<li>' . join('</li><li>', $e['aliases']) . '</li>';
$text = (!empty($firstsWords) ? "$firstsWords, " : "") . $e['name'];
$target = ['text' => $text, 'name' => $e['name'], 'type' => $e['type'], 'parent' => $e['parent'], 'aliases' => $aliases];
array_push($targets, $target);
}
$response['data'] = $targets;
} else {
$response['success'] = false;
$response['msg'] = "Resolver unreachable on $resolver_url.";
}
return $response;
}
function request($access_url, $query) {
# error_log($query);
$votMgr = new VOTableMgr;
$params = 'FORMAT=votable&LANG=ADQL&REQUEST=doQuery';
$url = $access_url . '/sync?' . $params . '&QUERY=' . urlencode(preg_replace('/\s+/', ' ', $query)); // remove also multiple whitespaces
if ($votMgr->load($url)) {
$data = $votMgr->parseStream();
}
$error = $votMgr->getVotableError();
$response = ['query' => $query, 'metaData' => ['root' => 'data', 'messageProperty' => 'msg']];
if($error) {
$response['success'] = false;
$response['msg'] = $error;
} else {
$response['success'] = true;
$response['data'] = $data;
}
return $response;
}
/* Return the list of available services by querying some usual registries. */
function getServices() {
$registriesURL = [
//"http://vao.stsci.edu/RegTAP/TapService.aspx",
"http://voparis-rr.obspm.fr/tap",
"http://registry.euro-vo.org/regtap/tap",
"http://dc.zah.uni-heidelberg.de/tap",
"http://gavo.aip.de/tap",
"http://reg.g-vo.org/tap",
];
$columns = ['short_name', 'res_title', 'ivoid', 'access_url', 'table_name', 'content_type', 'creator_seq', 'content_level', 'reference_url', 'created', 'updated'];
$query = "SELECT DISTINCT " . implode(', ', $columns) . " FROM rr.resource
NATURAL JOIN rr.res_schema NATURAL JOIN rr.res_table NATURAL JOIN rr.interface NATURAL JOIN rr.res_detail NATURAL JOIN rr.capability
WHERE standard_id='ivo://ivoa.net/std/tap' AND intf_type='vs:paramhttp' AND detail_xpath='/capability/dataModel/@ivo-id'
AND 1=ivo_nocasematch(detail_value, 'ivo://vopdc.obspm/std/EpnCore%') AND table_name LIKE '%.epn_core' ORDER BY short_name, table_name";
$regNumber = 0;
$r = [];
$lastErrorMessage = '';
for(; $regNumber < count($registriesURL) ; $regNumber++) {
$r = request($registriesURL[$regNumber], $query);
if($r['success']) {
// Add several other parameters and remove AMDA
for($j=0 ; $j<count($r['data']) ; $j++) {
$r['data'][$j]['id'] = generateServiceId($r['data'][$j]);
$r['data'][$j]['nb_results'] = -1;
$r['data'][$j]['info'] = 'Please make a query.';
if($r['data'][$j]['id'] == 'cdpp/amda/amdadb') {
array_splice($r['data'], $j, 1);
$j-=1;
}
}
if(!is_null($lastErrorMessage)) {
$r['msg'] = $lastErrorMessage;
}
break;
} else {
$lastErrorMesage = 'Error while requesting registry ' . $registriesURL[$regNumber] . ': ' . $r['msg'] . '.';
error_log($lastErrorMesage);
}
}
if(!$r['success']) {
$r['msg'] = 'Can not access registry: ' . $lastErrorMessage;
}
return $r;
}
function updateNbResults() {
$p = getParams(['url', 'tableName', 'targetNames', 'productTypes', 'timeMin', 'timeMax']);
$select = "SELECT COUNT(*) AS nb_res, min(time_min) as time_min, max(time_max) as time_max";
$from = "FROM " . $p['tableName'];
$where = createFilter($p['targetNames'], $p['productTypes'], $p['timeMin'], $p['timeMax']);
$r = request($p['url'], "$select $from $where");
if($r['success']) {
$r['success'] = false;
$r['msg'] = 'The service returned a bad value, can not get the number of results.';
if(count($r['data']) < 1) {
error_log('updateNbResults error: Too few returned rows.');
} else if(count($r['data']) > 1) {
error_log('updateNbResults error: Too many returned rows.');
} else if(!array_key_exists(0, $r['data'])) {
error_log('updateNbResults error: cant find raw item 0');
} else if(is_null($r['data'][0])) {
error_log('updateNbResults error: The returned raw is null.');
} else if(!array_key_exists("nb_res", $r['data'][0])) {
var_dump($r['data'][0]);
error_log('updateNbResults error: cant find nb_res value in the row: ' . json_encode($r['data'][0]));
} else if(!is_numeric($r['data'][0]['nb_res'])) {
error_log('updateNbResults error: The returned value is not a number.');
} else {
$r['success'] = true;
$r['data'] = [
'nbRes' => (int)($r['data'][0]['nb_res']),
'tMin' => JDToDate($r['data'][0]['time_min']),
'tMax' => JDToDate($r['data'][0]['time_max'])
];
$r['msg'] = 'The service returned ' . ($r['data']['nbRes'] == 0 ? 'no' : $r['data']['nbRes']) . ' result' . ($r['data']['nbRes'] > 1 ? 's' : '') . ' for the given query.';
}
}
return $r;
}
function getGranules() {
$p = getParams(['url', 'tableName', 'sort', 'dir', 'targetNames', 'productTypes', 'timeMin', 'timeMax', 'start', 'limit', 'nbRes']);
$select = "SELECT TOP " . $p['limit'] . " *";
$from = "FROM " . $p['tableName'];
$where = createFilter($p['targetNames'], $p['productTypes'], $p['timeMin'], $p['timeMax']);
$order = "ORDER BY " . (is_null($p['sort']) ? 'granule_uid ASC' : ($p['sort'] . ' ' . $p['dir']) . " OFFSET " . $p['start']);
$response = request($p['url'], "$select $from $where $order");
if($response['success']) {
$visibleColumns = ['granule_gid', 'obs_id', 'dataproduct_type', 'time_min', 'time_max', 'instrument_name', 'processing_level', 'access_estsize', 'thumbnail_url', 'access_url']; // rest are hidden
$names = ['granule_gid' => 'GID', 'dataproduct_type' => 'Type', 'processing_level' => 'Proc. lvl', 'access_estsize' => 'Size', 'access_url' => 'URL']; // default: pretty printed key name
$renderers = ['dataproduct_type' => 'type', 'time_min' => 'date', 'time_max' => 'date', 'processing_level' => 'proc_lvl',
'access_estsize' => 'size', 'thumbnail_url' => 'img', 'access_url' => 'link', 'access_format' => 'format']; // default: text
$widths = ['obs_id' => 75, 'time_min' => 75, 'time_max' => 75, 'instrument_name' => 75, 'processing_level' => 60]; // default: 50
$fields = array();
$columns = array();
foreach($response['data'][0] as $key => $value) {
$fields[] = ['name' => $key, 'type' => 'string'];
$columns[] = [
'dataIndex' => $key,
'text' => array_key_exists($key, $names) ? $names[$key] : ucfirst(str_replace('_', ' ', $key)),
'width' => array_key_exists($key, $widths) ? $widths[$key] : 50,
'hidden' => !in_array($key, $visibleColumns),
'filterable' => true,
// 'filter' => ['type' => 'list', 'options' => ['Image', 'Map']],
'renderer' => 'granule.' . (array_key_exists($key, $renderers) ? $renderers[$key] : 'text')
];
}
$response['total'] = (int)$p['nbRes'];
$response['metaData']['fields'] = $fields;
$response['metaData']['columns'] = $columns;
$response['metaData']['metaHash'] = md5(serialize($response['metaData']));
}
return $response;
}
// ----- utils -----
function createFilter($targetNames, $productTypes, $timeMin, $timeMax) {
$filter = array();
if($targetNames) {
array_push($filter, "target_name IN ('" . join("', '", preg_split("/ ?[;,] ?+/", $targetNames)) . "')");
}
if($productTypes) {
array_push($filter, "dataproduct_type IN ('" . join("', '", explode(';', $productTypes)) . "')");
}
if($timeMin) {
array_push($filter, "time_max >= " . dateToJD($timeMin));
}
if($timeMax) {
array_push($filter, "time_min <= " . dateToJD($timeMax));
}
return (count($filter) > 0 ? 'WHERE ' . join(' AND ', $filter) : '');
}
/* Generate a unique service identifier from the service ivoid and the table name. */
function generateServiceId($service) {
return str_replace(['ivo://', '.epn_core'], '', $service['ivoid'] . '/' . $service['table_name']);
}
function dateToJD($gregorian_date) {
list($day, $month, $year, $hours, $minutes, $seconds) = preg_split('/[\s\/:]+/', $gregorian_date);
return GregorianToJD($month, $day, $year) + $hours/24 + $minutes/(24*60) + $seconds/(24*60*60);
}
function JDToDate($julianDay) {
if(is_numeric($julianDay)) {
$jd = floatval($julianDay);
$t = fmod($jd - floor($jd) + 0.5, 1);
$h = floor($t*24);
$m = floor($t*24*60 - $h*60);
$s = floor($t*24*60*60 - $h*60*60 - $m*60);
$d = explode('/', jdtogregorian(floor($jd)));
$date = sprintf("%02d", $d[1]) . '/' . sprintf("%02d", $d[0]) . '/' . sprintf("%02d", $d[2]);
$time = sprintf("%02d", $h) . ':' . sprintf("%02d", $m) . ':' . sprintf("%02d", $s);
return $date . ' ' . $time;
} else {
return '-';
}
}