Commit ec4214ffc5990beb8f88152c826d43c92fcd7aa6

Authored by Alexis Koralewski
1 parent 4faed281
Exists in dev

Renaming pyros containers (pma & db)

  1 +12-12-2022 (AKo): v0.6.15.3
  2 + - Renaming pyros containers (pma & db)
  3 +
1 08-12-2022 (AKo): v0.6.15.3 4 08-12-2022 (AKo): v0.6.15.3
2 - Catch integretyerror (sequence name unique) when submitting seq file 5 - Catch integretyerror (sequence name unique) when submitting seq file
3 6
docker/PYROS_DOCKER_BUILD.sh 100644 → 100755
docker/PYROS_DOCKER_INSTALL
@@ -3,19 +3,19 @@ @@ -3,19 +3,19 @@
3 # if no container is running 3 # if no container is running
4 if ! [ $(docker ps | grep 'pyros' | wc -l) -eq 2 ] 4 if ! [ $(docker ps | grep 'pyros' | wc -l) -eq 2 ]
5 then 5 then
6 - echo "db_pyros or pyros weren't running, starting them..." 6 + echo "pyros-db or pyros weren't running, starting them..."
7 ./PYROS_DOCKER_START.bat 7 ./PYROS_DOCKER_START.bat
8 fi 8 fi
9 9
10 # while db container isn't ready to execute queries, wait 5 seconds 10 # while db container isn't ready to execute queries, wait 5 seconds
11 -if ! docker inspect db_pyros --format='{{.State.Health.Status}}' | grep -q 'healthy' 11 +if ! docker inspect pyros-db --format='{{.State.Health.Status}}' | grep -q 'healthy'
12 then 12 then
13 echo "db service isn't ready yet, waiting until it's ready..." 13 echo "db service isn't ready yet, waiting until it's ready..."
14 fi 14 fi
15 -while ! docker inspect db_pyros --format='{{.State.Health.Status}}' | grep -q 'healthy' 15 +while ! docker inspect pyros-db --format='{{.State.Health.Status}}' | grep -q 'healthy'
16 do 16 do
17 sleep 5 17 sleep 5
18 - heal_status=$(docker inspect db_pyros --format='{{.State.Health.Status}}') 18 + heal_status=$(docker inspect pyros-db --format='{{.State.Health.Status}}')
19 echo "Current status : $heal_status" 19 echo "Current status : $heal_status"
20 done 20 done
21 21
docker/PYROS_DOCKER_RUN
1 #!/usr/bin/env bash 1 #!/usr/bin/env bash
2 2
3 #if no container is running 3 #if no container is running
4 -if ! [ $(docker ps | grep 'pyros' | wc -l) -eq 2 ] 4 +if ! [ $(docker ps | grep 'pyros' | wc -l) -eq 3 ]
5 then 5 then
6 - echo "db_pyros or pyros weren't running, starting them..." 6 + echo "pyros-db or pyros weren't running, starting them..."
7 ./PYROS_DOCKER_START.bat 7 ./PYROS_DOCKER_START.bat
8 fi 8 fi
9 9
docker/PYROS_DOCKER_RUN_WEBSERVER_ONLY
1 #!/usr/bin/env bash 1 #!/usr/bin/env bash
2 2
3 #if no container is running 3 #if no container is running
4 -if ! [ $(docker ps | grep 'pyros' | wc -l) -eq 2 ] 4 +if ! [ $(docker ps | grep 'pyros' | wc -l) -eq 3 ]
5 then 5 then
6 - echo "db_pyros or pyros weren't running, starting them..." 6 + echo "pyros-db or pyros weren't running, starting them..."
7 ./PYROS_DOCKER_START.bat 7 ./PYROS_DOCKER_START.bat
8 fi 8 fi
9 docker exec -it pyros python3 pyros.py -d start webserver $@ 9 docker exec -it pyros python3 pyros.py -d start webserver $@
10 #docker exec -it pyros python3 pyros.py start webserver $@ 10 #docker exec -it pyros python3 pyros.py start webserver $@
11 #docker exec -it pyros python3 pyros.py -d start -o tnc webserver $@ 11 #docker exec -it pyros python3 pyros.py -d start -o tnc webserver $@
12 - 12 +s
docker/PYROS_DOCKER_SHELL
@@ -3,7 +3,7 @@ @@ -3,7 +3,7 @@
3 #if no container is running 3 #if no container is running
4 if ! [ $(docker ps | grep 'pyros' | wc -l) -eq 2 ] 4 if ! [ $(docker ps | grep 'pyros' | wc -l) -eq 2 ]
5 then 5 then
6 - echo "db_pyros or pyros weren't running, starting them..." 6 + echo "pyros-db or pyros weren't running, starting them..."
7 ./PYROS_DOCKER_START.bat 7 ./PYROS_DOCKER_START.bat
8 fi 8 fi
9 docker exec -it pyros bash $@ 9 docker exec -it pyros bash $@
docker/PYROS_DOCKER_TEST
@@ -3,7 +3,7 @@ @@ -3,7 +3,7 @@
3 # if no container is running 3 # if no container is running
4 if ! [ $(docker ps | grep 'pyros' | wc -l) -eq 2 ] 4 if ! [ $(docker ps | grep 'pyros' | wc -l) -eq 2 ]
5 then 5 then
6 - echo "db_pyros or pyros weren't running, starting them..." 6 + echo "pyros-db or pyros weren't running, starting them..."
7 ./PYROS_DOCKER_START.bat 7 ./PYROS_DOCKER_START.bat
8 fi 8 fi
9 docker exec -it pyros python3 pyros.py test $@ 9 docker exec -it pyros python3 pyros.py test $@
docker/PYROS_DOCKER_UPDATE
1 #!/usr/bin/env bash 1 #!/usr/bin/env bash
2 2
3 # If no container is running Start it 3 # If no container is running Start it
4 -if ! [ $(docker ps | grep 'pyros' | wc -l) -eq 2 ] 4 +if ! [ $(docker ps | grep 'pyros' | wc -l) -eq 3 ]
5 then 5 then
6 - echo "db_pyros or pyros weren't running, starting them..." 6 + echo "pyros-db or pyros weren't running, starting them..."
7 ./PYROS_DOCKER_START.bat 7 ./PYROS_DOCKER_START.bat
8 fi 8 fi
9 9
docker/docker-compose.yml
@@ -7,7 +7,7 @@ services: @@ -7,7 +7,7 @@ services:
7 image: mysql:8.0.28 7 image: mysql:8.0.28
8 command: --default-authentication-plugin=mysql_native_password 8 command: --default-authentication-plugin=mysql_native_password
9 restart: always 9 restart: always
10 - container_name: db_pyros 10 + container_name: pyros-db
11 environment: 11 environment:
12 # note : as db is an image of mysql, this root password will be set on the first installation on the image, if the value is changed, it will not be updated in the database 12 # note : as db is an image of mysql, this root password will be set on the first installation on the image, if the value is changed, it will not be updated in the database
13 - "MYSQL_ROOT_PASSWORD=${MYSQL_ROOT_PASSWORD:-root}" 13 - "MYSQL_ROOT_PASSWORD=${MYSQL_ROOT_PASSWORD:-root}"
@@ -69,7 +69,7 @@ services: @@ -69,7 +69,7 @@ services:
69 restart: always 69 restart: always
70 phpmyadmin: 70 phpmyadmin:
71 image: phpmyadmin/phpmyadmin 71 image: phpmyadmin/phpmyadmin
72 - container_name: pma 72 + container_name: pyros-pma
73 links: 73 links:
74 - db 74 - db
75 environment: 75 environment: