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src/idl/dustemwrap_plot.pro 50.6 KB
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PRO dustemwrap_plot,p_dim,st,dustem_sed,SED_spec,dustem_qsed,Q_spec,dustem_used,U_spec,dustem_polsed,P_spec,dustem_polfrac,SP_spec,dustem_psi_em,PSI_spec,_extra=_extra 
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;dustem_sed,SED_spec,dustem_qsed,Q_spec,dustem_used,U_spec,dustem_polsed,P_spec,dustem_polfrac,SP_spec,dustem_psi_em,PSI_spec,



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;This is also necessary for the plotting of the results of the fit (Last iteration) 
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IF not keyword_set(st) THEN BEGIN
  ;Activation of the plugins is needed because of the plotting of the total emission model that includes them. 
  dustem_activate_plugins,p_dim/(*(*!dustem_fit).param_init_values)  ; 0/0 division case?
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  st=dustem_run(p_dim)
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  dustem_sed = dustem_compute_sed(p_dim,st,SED_spec)
  
  if !run_pol && !run_lin then begin
      
      dustem_polsed = dustem_compute_polsed(p_dim,st,P_spec,SP_spec,dustem_polfrac)
      toto = dustem_compute_stokes(p_dim,st,dustem_qsed,dustem_used,Q_spec,U_spec,PSI_spec,dustem_psi_em) 
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      ;This is for emission but what about extinction...
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  endif  
   
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ENDIF ELSE BEGIN ;st is provided 
    
        dustem_sed = dustem_compute_sed(p_dim,st,SED_spec)
    
    if !run_pol && !run_lin then begin
        
        dustem_polsed = dustem_compute_polsed(p_dim,st,P_spec,SP_spec,dustem_polfrac)
        toto = dustem_compute_stokes(p_dim,st,dustem_qsed,dustem_used,Q_spec,U_spec,PSI_spec,dustem_psi_em) 
        
        ;This is for emission but what about extinction...
            
    endif
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ENDELSE 
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;if ~windowavailable(cgquery()) then begin

;LIST OF TESTS THAT NEED TO BE RAN SO THAT THE PLOTTING OF THE MODEL SPECTRA OCCURS

test_sed = isa(!dustem_show.sed)
test_ext = isa(!dustem_show.ext)
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if !run_pol then begin
    test_polext = isa(!dustem_show.polext)
    test_polsed = isa(!dustem_show.polsed)
    test_polfrac = isa(!dustem_show.polfrac)
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    test_fpolext = isa(!dustem_show.fpolext)
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    test_psi_em = isa(!dustem_show.psi_em)
    test_psi_ext = isa(!dustem_show.psi_ext)
    test_qsed = isa(!dustem_show.qsed)
    test_used = isa(!dustem_show.used)
    test_qext = isa(!dustem_show.qext)
    test_uext = isa(!dustem_show.uext)
    test_m = test_sed or test_polsed or test_polfrac or test_qsed or test_used or test_psi_em
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    test_x = test_ext or test_polext or test_fpolext or test_qext or test_uext or test_psi_ext
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endif else begin
    test_m = test_sed 
    test_x = test_ext 
endelse
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;testing on the fitting of emission vs extinction data
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n_plgns = n_tags(*!dustem_plugin)
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frmt0='(A36)'
frmt1='(1E10.2)'
frmt2='(10F10.2)'

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;I have decided to keep track of the command index manually as I did not find any command online that does this.
cmdind_m = 0 ;for emission
cmdind_x = 0 ;for extinction
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;trying to do the same thing for parameters and plugins
cmdind_prms = 0 ;for parameters
cmdind_plgns = 0 ;for plugins
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;ADDING PLUGIN(S) TO SPECTRUM----------------
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;these following indices will be used to change the keep the same information in the _extra structure
;this is an initial solution until I finish coding the _extra-filtering procedure. 

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iswinsed = !dustemcgwin_id.sed EQ la_undef()
iswinext = !dustemcgwin_id.ext EQ la_undef()

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;trying to do the same thing for parameters and plugins
;But we need to know if the extinction or the emission mode is on.
;so the use of ths pointer will be different than the others
iswinprms = !dustemcgwin_id.prms EQ la_undef()
iswinplgns = !dustemcgwin_id.plgns EQ la_undef()


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;plotstrct = !p
degtorad = !pi/180 ;factor that the arctan will be devided by in order to have an axis in degrees. Talk to JP maybe he wants angle in radians.

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;I think I will test over the presence of the errors because they are not computed at that point.

;errors = ((*!dustem_fit).current_param_errors)
if isa((*!dustem_fit).current_param_errors) then begin
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    errors = (*(*!dustem_fit).current_param_errors) * (*(*!dustem_fit).param_init_values)
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endif else begin
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    errors = (*(*!dustem_fit).param_init_values)*0.;+la_undef();Initialized to 0 instead of la_undef() 
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ENDELSE 

if isa((*!dustem_fit).chi2) then begin
    chi2 = (*!dustem_fit).chi2    
endif else begin
    chi2 = la_undef();maybe not the best initialization 
endelse 

if isa((*!dustem_fit).rchi2) then begin
    rchi2 = (*!dustem_fit).rchi2    
endif else begin
    rchi2 = la_undef();maybe not the best initialization 
endelse 

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if isa(p_dim) then begin
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    if isa((*!dustem_fit).current_param_values) then begin
        
        res  = (*(*!dustem_fit).current_param_values) 
        
    endif else begin  
    
        res = p_dim    
    
    endelse
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endif else begin
    
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   res = (*(*!dustem_fit).param_init_values)*0.;+la_undef()
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endelse
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if test_m then begin
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    ;Generating emission window and saving window ID
    
    if iswinsed then begin
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        if !run_pol then cgwindow,wxsize=910,wysize=658,wtitle='DUSTEMWRAP v2.0 (EMISSION)' else cgwindow, wtitle='DUSTEMWRAP v2.0 (EMISSION)';, wback='grey';,wobject=winobj_m
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        winid_m = cgquery(dimensions=dim_m,/current) ;this has to be changed because the dimensions of this array change with the data sets present (extinction/emission).
        !dustemcgwin_id.sed = winid_m
        
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        cgcontrol, winid_m, execute=0
        ;cgset, winid_m
        ;Plotting model string (legend)
        xxpos = 0.015
        yypos = 0.97
        ;Plotting Hydrogen column density string (legend)
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        cgtext, xxpos, yypos,'Model : '+!dustem_model,color=0,/normal,charsize = 1.2,/addcmd ;& cmdind_m+=1 This is the first command in the window
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        yypos = 0.95
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        cgtext, xxpos, yypos,textoidl('N_{H}')+textoidl(' (H/cm^2) : ')+strmid(string(*!dustem_HCD,format='(1E10.2)'),2),color=0,/normal,charsize = 1.2,/addcmd & cmdind_m+=1
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        ;Plotting of the number of iterations completed by the fitter
        
        ;Plotting of the number of runs
        ;Getting the width of the unrefreshed string
        widthtot=0.
        cgtext, xxpos, yypos,'Runs : ',color=0,/normal,charsize=-1,width=thiswidth,/addcmd & cmdind_m+=1
        widthtext = thiswidth
        widthtot+= thiswidth ;fixed width
        !dustemcgwin_ncmds.runs.txtwdth = thiswidth
        
        ;Getting the width of the refreshed string
        cgtext, xxpos, yypos,strtrim(!dustem_iter.act,2),color=0,/normal,charsize=-1,width=thiswidth,/addcmd & cmdind_m+=1
        widthtot+= thiswidth;varying width        
        
        ;These two lines will also have to      be modified when plotting the refreshed values
        xxpos = 0.015 ;1.0 - widthtot - 0.03
        yypos = 0.015
        
        ;Displaying fixed part
        cgtext, xxpos, yypos,'Runs : ',color=0,/normal,charsize = 1.35,/addcmd & cmdind_m+=1
        ;Displaying refreshed part (first run . This is the command that will be replaced)
        cgtext, xxpos + widthtext + 0.015 , yypos,strtrim(!dustem_iter.act,2),color=0,/normal,charsize = 1.0,/addcmd & cmdind_m+=1
        ;saving the command id to replace it
        !dustemcgwin_ncmds.runs.pl = cmdind_m

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        ;plotting of (mostly) fixed data for rchi2
        ;Since the format of the strings is specified, the length/width of the string in thex direction is fixed. 
        
        
        ;Getting the width of the unrefreshed string
        widthtot=0.
        cgtext, xxpos, yypos,textoidl('\chi^{2} : '),color=0,/normal,charsize=-1,width=thiswidth,/addcmd & cmdind_m+=1
        widthtext = thiswidth
        widthtot+= thiswidth ;fixed width
        
        ;Getting the width of the refresh.ed string
        cgtext, xxpos, yypos,strtrim(string(chi2,format=frmt2),2),color=0,/normal,charsize=-1,width=thiswidth,/addcmd & cmdind_m+=1
        widthtot+= thiswidth;varying width        
        ;saving the command string width to replace it
        !dustemcgwin_ncmds.chi2.txtwdth = thiswidth
        
        
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        xxpos = 1.0 - widthtot - 0.03
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        yypos = 0.97
        
        ;Displaying fixed part
        cgtext, xxpos, yypos,textoidl('\chi^{2} : '),color=0,/normal,charsize = 1.0,/addcmd & cmdind_m+=1
        ;Displaying refreshed part (first run . This is the command that will be replaced)
        
        cgtext, xxpos + widthtext , yypos,strtrim(string(chi2,format=frmt2),2),color=0,/normal,charsize = 1.0,/addcmd & cmdind_m+=1
       
        ;saving the command id to replace it
        !dustemcgwin_ncmds.chi2.pl = cmdind_m
 
        
        
        ;plotting of (mostly) fixed data for rchi2
        
        ;Getting the width of the unrefreshed string
        widthtot=0.
        cgtext, xxpos, yypos,textoidl('r_{\chi^{2}} : '),color=0,/normal,charsize=-1,width=thiswidth,/addcmd & cmdind_m+=1
        widthtext = thiswidth
        widthtot+= thiswidth ;fixed width
        ;!dustemcgwin_ncmds.rchi2.txtwdth1 = thiswidth
        ;Getting the width of the refreshed string
        cgtext, xxpos, yypos,strtrim(string(rchi2,format=frmt2),2),color=0,/normal,charsize=-1,width=thiswidth,/addcmd & cmdind_m+=1
        widthtot+= thiswidth;varying width        
        !dustemcgwin_ncmds.rchi2.txtwdth = thiswidth
        ;These two lines will also have to      be modified when plotting the refreshed values
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        xxpos = 1.0 - widthtot - 0.03
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        yypos = 0.95
        
        ;Displaying fixed part
        cgtext, xxpos, yypos,textoidl('r_{\chi^{2}} : '),color=0,/normal,charsize = 1.35,/addcmd & cmdind_m+=1
        ;Displaying refreshed part (first run . This is the command that will be replaced)
        cgtext, xxpos + widthtext , yypos,strtrim(string(rchi2,format=frmt2),2),color=0,/normal,charsize = 1.0,/addcmd & cmdind_m+=1
        ;saving the command id to replace it
        !dustemcgwin_ncmds.rchi2.pl = cmdind_m
        
        
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        ;Plotting of the title of the dashboard (plot(s))
        
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        ;NB issue here because the user can't modify the title after the dustem_mpfit_data call at the main procedure level (user proc)
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        ;Getting the width of the title 
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        tit=string(_extra.title);
    
        cgtext, 0.3, 0.95,tit+' (RUNNING)',color=0,/normal,charsize=-1,width=thiswidth,/addcmd & cmdind_m+=1
        widthtot = thiswidth
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        xxpos = (1 - thiswidth)/2
        yypos = 0.96
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        cgtext, 0.3, 0.95,tit,color=0,/normal,charsize=-1,width=thiswidth,/addcmd & cmdind_m+=1 
        !dustemcgwin_ncmds.pltit.txtwdth = thiswidth*1.6 + (1 - widthtot)/2
         
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        cgtext, xxpos, yypos,tit,color=0,/normal,charsize = 1.6,/addcmd & cmdind_m+=1
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        xxpos+=thiswidth*1.6
        cgtext, xxpos, yypos,' (RUNNING)',color=0,/normal,charsize = 1.6,/addcmd & cmdind_m+=1
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        !dustemcgwin_ncmds.pltit.pl = cmdind_m
        
    endif else begin 
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        winid_m = !dustemcgwin_id.sed
        cgcontrol, winid_m, execute=0
        cgset, winid_m ;apparently specifying the window index isn't enough. This might be because of the use of cgcontrol
        
        ;Refreshing chi2 data: 
        cmdin_m = !dustemcgwin_ncmds.chi2.pl
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        xxpos = 1 - !dustemcgwin_ncmds.chi2.txtwdth - 0.03  
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        yypos = 0.97
        cgwindow,'cgtext', xxpos , yypos,strtrim(string(chi2,format=frmt2),2),color=0,/normal,charsize = 1.0,/replacecmd,cmdindex=cmdin_m, winid=winid_m ;& cmdind_m+=1
        
        
        
        ;Refreshing rchi2 data: 
        cmdin_m = !dustemcgwin_ncmds.rchi2.pl
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        xxpos = 1 - !dustemcgwin_ncmds.rchi2.txtwdth - 0.03  
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        yypos = 0.95
        cgwindow,'cgtext', xxpos , yypos,strtrim(string(rchi2,format=frmt2),2),color=0,/normal,charsize = 1.0,/replacecmd,cmdindex=cmdin_m, winid=winid_m ;& cmdind_m+=1
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        ;Refreshing number of runs data: 
        cmdin_m = !dustemcgwin_ncmds.runs.pl
        xxpos = 0.03 + !dustemcgwin_ncmds.runs.txtwdth*1.35  ;(because of charsize)
        yypos = 0.015
        cgwindow,'cgtext', xxpos , yypos,strtrim(!dustem_iter.act,2),color=0,/normal,charsize = 1.0,/replacecmd,cmdindex=cmdin_m, winid=winid_m ;& cmdind_m+=1
        
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        ;update of the title here ?
        
        if isa((*!dustem_fit).current_param_values) then begin
            ;replacing my count - 3
            tit=string(_extra.title)
            cmdin_m = !dustemcgwin_ncmds.pltit.pl
            
            xxpos = !dustemcgwin_ncmds.pltit.txtwdth
            yypos = 0.96
        
            cgwindow,'cgtext', xxpos , yypos,' (Final Run)',color=0,/normal,charsize = 1.6,/replacecmd,cmdindex=cmdin_m, winid=winid_m  
        
        endif
    
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    endelse
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    ;cgWindow_GetDefs,xsize=xsize,ysize=ysize
    ;cgcontrol, resize=[xsize,ysize]
    if !run_pol then begin
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        ;,wback='grey'
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        ;position arrays for plot and normalized graph
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        ;THIS IS HARD-CODED IN A VERY SILLY WAY
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        p_sed = [0.05,0.67,0.475,0.90]
        p_psed = [0.525,0.67,0.95,0.90]
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        p_spsed = [0.05,0.375,0.475,0.575]
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        p_psised = [0.525,0.375,0.95,0.575]
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        p_qsed = [0.05,0.12,0.475,0.35]  
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        p_used = [0.525,0.12,0.95,0.35]
        
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        np_sed = [0.05,0.60,0.475,0.67]
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        np_psed = [0.525,0.60,0.95,0.67]
        np_qsed = [0.05,0.05,0.475,0.12] 
        np_used = [0.525,0.05,0.95,0.12]
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        p_sed[1]+= 0.0125 & p_sed[3]+= 0.0125 
        p_psed[1]+= 0.0125 & p_psed[3]+= 0.0125
        p_spsed[1]+= 0.0125 & p_spsed[3]+= 0.0125
        p_psised[1]+= 0.0125 & p_psised[3]+= 0.0125
        p_qsed[1]+= 0.0125 & p_qsed[3]+= 0.0125
        p_used[1]+= 0.0125 & p_used[3]+= 0.0125
        
        np_sed[1]+= 0.0125 & np_sed[3]+= 0.0125 
        np_psed[1]+= 0.0125 & np_psed[3]+= 0.0125
        np_qsed[1]+= 0.0125 & np_qsed[3]+= 0.0125
        np_used[1]+= 0.0125 & np_used[3]+= 0.0125
        
        
          
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    endif else begin
        p_sed  = [0.07,0.30,0.97,0.85]
        np_sed = [0.07,0.10,0.97,0.30]
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341
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    endelse

    ;Plotting of sed data axes (whether or not data is present)
    plotsym,0,/fill ;you might need to execute this again. hmm...
5f04fa07   Ilyes Choubani   general update
343
344


bc224f3e   Ilyes Choubani   Update of plottin...
345
    ;This is not the right test the user might want to show the prediction for sed and fit the stokes parameters
2910e8ce   Ilyes Choubani   Draft version of ...
346
347
    if ~test_sed then begin ; SED data is not present (For completeness) # This is only valid when !run_pol=1
        
5f04fa07   Ilyes Choubani   general update
348
349
        cgwindow,'dustemcgwin_dataset', st, dataset='SED', /nodata, position=p_sed, /addcmd, winid=winid_m, _extra=_extra & cmdind_m+=1
        cgwindow,'dustemcgwin_dataset', st, dataset='SED', /nodata, /norm, position=np_sed, /addcmd, winid=winid_m, _extra=_extra & cmdind_m+=1
2910e8ce   Ilyes Choubani   Draft version of ...
350

2910e8ce   Ilyes Choubani   Draft version of ...
351
    endif else begin ;SED exists
18e4331f   Ilyes Choubani   general update (f...
352
353

       if  ~iswinsed then begin
5f04fa07   Ilyes Choubani   general update
354
       
18e4331f   Ilyes Choubani   general update (f...
355
           cmdind_m = !dustemcgwin_ncmds.sed.pl
5f04fa07   Ilyes Choubani   general update
356
357
           cgwindow,'dustemcgwin_dataset', st, dustem_sed,SED_spec,dataset='SED', /refresh ,position=p_sed, winid=winid_m,cmdindex=cmdind_m,/replacecmd,_extra=_extra     
           
18e4331f   Ilyes Choubani   general update (f...
358
           cmdind_m = !dustemcgwin_ncmds.sed.nrm
5f04fa07   Ilyes Choubani   general update
359
360
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           cgwindow,'dustemcgwin_dataset', st, dustem_sed,SED_spec,dataset='SED', /norm, /refresh,position=np_sed, winid=winid_m,cmdindex=cmdind_m,/replacecmd,_extra=_extra
           
           
18e4331f   Ilyes Choubani   general update (f...
362
       endif else begin
5f04fa07   Ilyes Choubani   general update
363
364
365
      
           cgwindow,'dustemcgwin_dataset', st, dataset='SED', position=p_sed, /addcmd, winid=winid_m, _extra=_extra & cmdind_m+=1 
           cgwindow,'dustemcgwin_dataset', st, dustem_sed,SED_spec, dataset='SED', /refresh ,position=p_sed, /addcmd, winid=winid_m, _extra=_extra & cmdind_m+=1
18e4331f   Ilyes Choubani   general update (f...
366
           !dustemcgwin_ncmds.sed.pl = cmdind_m
5f04fa07   Ilyes Choubani   general update
367
           
18e4331f   Ilyes Choubani   general update (f...
368
           cgwindow,'dustemcgwin_dataset', st, dataset='SED',/norm, position=np_sed, /addcmd, winid=winid_m, _extra=_extra & cmdind_m+=1 ;I think nodata can also be used too
5f04fa07   Ilyes Choubani   general update
369
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           cgwindow,'dustemcgwin_dataset', st, dustem_sed,SED_spec, dataset='SED', /norm, /refresh,position=np_sed, /addcmd ,winid=winid_m, _extra=_extra & cmdind_m+=1
18e4331f   Ilyes Choubani   general update (f...
371
           !dustemcgwin_ncmds.sed.nrm = cmdind_m
5f04fa07   Ilyes Choubani   general update
372
              
18e4331f   Ilyes Choubani   general update (f...
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       endelse       
    endelse
    
    ;if ~!run_pol then begin;I don't think the order of the  ;goto, end_m
      if !run_pol then begin ;then goto, end_m
2910e8ce   Ilyes Choubani   Draft version of ...
378
        
18e4331f   Ilyes Choubani   general update (f...
379
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        if ~test_qsed then begin ;Qsed is not present
            
            cgwindow,'dustemcgwin_dataset', st, dataset='QSED', /nodata, position=p_qsed, /addcmd, winid=winid_m, _extra=_extra & cmdind_m+=1
5f04fa07   Ilyes Choubani   general update
382
            cgwindow,'dustemcgwin_dataset', st, dataset='QSED', /nodata, /norm, position=np_qsed, /addcmd, winid=winid_m, _extra=_extra & cmdind_m+=1
c8368c6e   Ilyes Choubani   updating plotting...
383
        
18e4331f   Ilyes Choubani   general update (f...
384
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        endif else begin ;Qsed data is present
               
            if  ~iswinsed then begin
                cmdind_m = !dustemcgwin_ncmds.qsed.pl
                ;refreshing the positive_only and negative_only plots if data is present in them
5f04fa07   Ilyes Choubani   general update
389
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                cgwindow,'dustemcgwin_dataset', st, dustem_qsed,Q_spec,SED_spec,dataset='QSED',/positive_only, nodata=0, /refresh ,position=p_qsed, winid=winid_m,/replacecmd,cmdindex=cmdind_m, _extra=_extra
                
                cgwindow,'dustemcgwin_dataset', st, dustem_qsed,Q_spec,SED_spec, dataset='QSED',/negative_only, nodata=0, /refresh ,position=p_qsed, winid=winid_m,/replacecmd,cmdindex=cmdind_m, _extra=_extra
                
18e4331f   Ilyes Choubani   general update (f...
393
                cmdind_m = !dustemcgwin_ncmds.qsed.nrm
5f04fa07   Ilyes Choubani   general update
394
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                cgwindow,'dustemcgwin_dataset', st, dustem_qsed,Q_spec,SED_spec, dataset='QSED', /refresh, nodata=0, /norm,position=np_qsed, winid=winid_m,/replacecmd,cmdindex=cmdind_m, _extra=_extra
                
18e4331f   Ilyes Choubani   general update (f...
396
            endif else begin
5f04fa07   Ilyes Choubani   general update
397
                
dfc68a85   Ilyes Choubani   Fixed some plotti...
398
                ;Plotting of postive values if they exist (if hidden data is present it is plotted if not an empty plot is rendered)
18e4331f   Ilyes Choubani   general update (f...
399
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                cgwindow,'dustemcgwin_dataset', st, dataset='QSED', position=p_qsed, /addcmd, winid=winid_m,/positive_only, _extra=_extra & cmdind_m+=1
                ;Refreshing the positive_only plot ONLY if there is data. If not do nothing
5f04fa07   Ilyes Choubani   general update
401
                cgwindow,'dustemcgwin_dataset', st, dustem_qsed,Q_spec,SED_spec, dataset='QSED',/positive_only, /refresh ,position=p_qsed, /addcmd, winid=winid_m, _extra=_extra & cmdind_m+=1
18e4331f   Ilyes Choubani   general update (f...
402
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404
                
                cgwindow,'dustemcgwin_dataset', st, dataset='QSED', position=p_qsed, /addcmd, winid=winid_m,/negative_only, _extra=_extra & cmdind_m+=1
                ;Refreshing the negative_only plot ONLY if there is data. If not do nothing
5f04fa07   Ilyes Choubani   general update
405
406
                cgwindow,'dustemcgwin_dataset', st, dustem_qsed,Q_spec,SED_spec,dataset='QSED',/negative_only, /refresh ,position=p_qsed, /addcmd, winid=winid_m, _extra=_extra & cmdind_m+=1
            
18e4331f   Ilyes Choubani   general update (f...
407
408
                !dustemcgwin_ncmds.qsed.pl = cmdind_m
                
5f04fa07   Ilyes Choubani   general update
409
                
18e4331f   Ilyes Choubani   general update (f...
410
                cgwindow,'dustemcgwin_dataset', st, dataset='QSED',/norm, position=np_qsed, /addcmd, winid=winid_m, _extra=_extra & cmdind_m+=1 ;I think nodata can also be uqsed too
5f04fa07   Ilyes Choubani   general update
411
                cgwindow,'dustemcgwin_dataset', st, dustem_qsed,Q_spec,SED_spec,dataset='QSED', /norm, /refresh,position=np_qsed, /addcmd, winid=winid_m, _extra=_extra & cmdind_m+=1
18e4331f   Ilyes Choubani   general update (f...
412
                !dustemcgwin_ncmds.qsed.nrm = cmdind_m
5f04fa07   Ilyes Choubani   general update
413
                
18e4331f   Ilyes Choubani   general update (f...
414
415
        endelse       
      endelse
5f04fa07   Ilyes Choubani   general update
416
         ;stop        
18e4331f   Ilyes Choubani   general update (f...
417
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        if ~test_used then begin ;used is not present
            
            cgwindow,'dustemcgwin_dataset', st, dataset='USED', /nodata, position=p_used, /addcmd, winid=winid_m, _extra=_extra & cmdind_m+=1
5f04fa07   Ilyes Choubani   general update
420
            cgwindow,'dustemcgwin_dataset', st, dataset='USED', /nodata, /norm, position=np_used, /addcmd, winid=winid_m, _extra=_extra & cmdind_m+=1
c8368c6e   Ilyes Choubani   updating plotting...
421
        
18e4331f   Ilyes Choubani   general update (f...
422
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        endif else begin ;used data is present
               
            if  ~iswinsed then begin
                cmdind_m = !dustemcgwin_ncmds.used.pl
                ;refreshing the positive_only and negative_only plots if data is present in them
5f04fa07   Ilyes Choubani   general update
427
428
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                cgwindow,'dustemcgwin_dataset', st, dustem_used,U_spec,SED_spec, dataset='USED',/positive_only, /refresh, nodata=0 ,position=p_used, winid=winid_m,/replacecmd,cmdindex=cmdind_m, _extra=_extra
                
                cgwindow,'dustemcgwin_dataset', st, dustem_used,U_spec,SED_spec, dataset='USED',/negative_only, /refresh, nodata=0 ,position=p_used, winid=winid_m,/replacecmd,cmdindex=cmdind_m, _extra=_extra
                
18e4331f   Ilyes Choubani   general update (f...
431
                cmdind_m = !dustemcgwin_ncmds.used.nrm
5f04fa07   Ilyes Choubani   general update
432
433
                cgwindow,'dustemcgwin_dataset', st, dustem_used,U_spec,SED_spec, dataset='USED', /refresh, nodata=0, /norm,position=np_used, winid=winid_m,/replacecmd,cmdindex=cmdind_m, _extra=_extra
                
18e4331f   Ilyes Choubani   general update (f...
434
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            endif else begin
            ;stop
                ;Plotting of postive values if they exist (if hidden data is present it is plotted if not an empty plot is rendred)
                cgwindow,'dustemcgwin_dataset', st, dataset='USED', position=p_used, /addcmd, winid=winid_m,/positive_only, _extra=_extra & cmdind_m+=1
                ;Refreshing the positive_only plot ONLY if there is data. If not do nothing
5f04fa07   Ilyes Choubani   general update
439
                cgwindow,'dustemcgwin_dataset', st, dustem_used,U_spec,SED_spec, dataset='USED',/positive_only, /refresh ,position=p_used, /addcmd, winid=winid_m, _extra=_extra & cmdind_m+=1
18e4331f   Ilyes Choubani   general update (f...
440
441
442
                
                cgwindow,'dustemcgwin_dataset', st, dataset='USED', position=p_used, /addcmd, winid=winid_m,/negative_only, _extra=_extra & cmdind_m+=1
                ;Refreshing the negative_only plot ONLY if there is data. If not do nothing
5f04fa07   Ilyes Choubani   general update
443
                cgwindow,'dustemcgwin_dataset', st, dustem_used,U_spec,SED_spec, dataset='USED',/negative_only, /refresh ,position=p_used, /addcmd, winid=winid_m, _extra=_extra & cmdind_m+=1
18e4331f   Ilyes Choubani   general update (f...
444
445
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447
                
                !dustemcgwin_ncmds.used.pl = cmdind_m
                
                cgwindow,'dustemcgwin_dataset', st, dataset='USED',/norm, position=np_used, /addcmd, winid=winid_m, _extra=_extra & cmdind_m+=1 ;I think nodata can also be uused too
5f04fa07   Ilyes Choubani   general update
448
                cgwindow,'dustemcgwin_dataset', st, dustem_used,U_spec,SED_spec, dataset='USED', /norm, /refresh,position=np_used, /addcmd, winid=winid_m, _extra=_extra & cmdind_m+=1
18e4331f   Ilyes Choubani   general update (f...
449
                !dustemcgwin_ncmds.used.nrm = cmdind_m
5f04fa07   Ilyes Choubani   general update
450
                
18e4331f   Ilyes Choubani   general update (f...
451
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        endelse       
      endelse
      
      if ~test_psi_em then begin ; psi_em data is not present (For completeness) # This is only valid when !run_pol=1
          
          cgwindow,'dustemcgwin_dataset', st, dataset='psi_em', /nodata, position=p_psised, /addcmd, winid=winid_m, _extra=_extra  & cmdind_m+=1
18e4331f   Ilyes Choubani   general update (f...
457
458
459
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461

      endif else begin ;psi_em exists

         if  ~iswinsed then begin
             cmdind_m = !dustemcgwin_ncmds.psi_em.pl
5f04fa07   Ilyes Choubani   general update
462
             cgwindow,'dustemcgwin_dataset', st, dustem_psi_em,PSI_spec,SED_spec, dataset='psi_em', /refresh ,position=p_psised, winid=winid_m,/replacecmd,cmdindex=cmdind_m, _extra=_extra
af5bca1f   Ilyes Choubani   general update
463
             
18e4331f   Ilyes Choubani   general update (f...
464
465
466
         endif else begin
         ;stop
             cgwindow,'dustemcgwin_dataset', st, dataset='psi_em', position=p_psised, /addcmd, winid=winid_m, _extra=_extra & cmdind_m+=1
5f04fa07   Ilyes Choubani   general update
467
             cgwindow,'dustemcgwin_dataset', st, dustem_psi_em,PSI_spec,SED_spec, dataset='psi_em', /refresh ,position=p_psised, /addcmd, winid=winid_m, _extra=_extra & cmdind_m+=1
18e4331f   Ilyes Choubani   general update (f...
468
             !dustemcgwin_ncmds.psi_em.pl = cmdind_m
af5bca1f   Ilyes Choubani   general update
469

18e4331f   Ilyes Choubani   general update (f...
470
471
         endelse       
      endelse
c8368c6e   Ilyes Choubani   updating plotting...
472
        
18e4331f   Ilyes Choubani   general update (f...
473
474
475
476
      
      if ~test_polsed then begin ; polsed data is not present (For completeness) # This is only valid when !run_pol=1
          
          cgwindow,'dustemcgwin_dataset', st, dataset='polsed', /nodata, position=p_psed, /addcmd, winid=winid_m, _extra=_extra & cmdind_m+=1
5f04fa07   Ilyes Choubani   general update
477
          cgwindow,'dustemcgwin_dataset', st, dataset='polsed', /nodata, /norm, position=np_psed, /addcmd, winid=winid_m, _extra=_extra & cmdind_m+=1
18e4331f   Ilyes Choubani   general update (f...
478
479
480
481
482

      endif else begin ;polsed exists

         if  ~iswinsed then begin
             cmdind_m = !dustemcgwin_ncmds.polsed.pl
5f04fa07   Ilyes Choubani   general update
483
             cgwindow,'dustemcgwin_dataset', st, dustem_polsed,P_spec, dataset='polsed', /refresh ,position=p_psed, winid=winid_m,/replacecmd,cmdindex=cmdind_m, _extra=_extra
18e4331f   Ilyes Choubani   general update (f...
484
             cmdind_m = !dustemcgwin_ncmds.polsed.nrm
5f04fa07   Ilyes Choubani   general update
485
             cgwindow,'dustemcgwin_dataset', st, dustem_polsed,P_spec, dataset='polsed', /norm, /refresh,position=np_psed, winid=winid_m,/replacecmd,cmdindex=cmdind_m, _extra=_extra
18e4331f   Ilyes Choubani   general update (f...
486
487
488
         endif else begin
         ;stop
             cgwindow,'dustemcgwin_dataset', st, dataset='polsed', position=p_psed, /addcmd, winid=winid_m, _extra=_extra  & cmdind_m+=1  
5f04fa07   Ilyes Choubani   general update
489
             cgwindow,'dustemcgwin_dataset', st, dustem_polsed,P_spec, dataset='polsed', /refresh ,position=p_psed, /addcmd, winid=winid_m, _extra=_extra & cmdind_m+=1
18e4331f   Ilyes Choubani   general update (f...
490
491
             !dustemcgwin_ncmds.polsed.pl = cmdind_m
             cgwindow,'dustemcgwin_dataset', st, dataset='polsed',/norm, position=np_psed, /addcmd, winid=winid_m, _extra=_extra & cmdind_m+=1 ;I think nodata can also be upolsed too
5f04fa07   Ilyes Choubani   general update
492
             cgwindow,'dustemcgwin_dataset', st, dustem_polsed,P_spec, dataset='polsed', /norm, /refresh,position=np_psed, /addcmd, winid=winid_m, _extra=_extra & cmdind_m+=1
18e4331f   Ilyes Choubani   general update (f...
493
494
495
             !dustemcgwin_ncmds.polsed.nrm = cmdind_m
         endelse       
      endelse      
af5bca1f   Ilyes Choubani   general update
496
497
      
      
af5bca1f   Ilyes Choubani   general update
498
499
500
      if ~test_polfrac then begin ; polfrac data is not present (For completeness) # This is only valid when !run_pol=1
          
          cgwindow,'dustemcgwin_dataset', st, dataset='polfrac', /nodata, position=p_spsed, /addcmd, winid=winid_m, _extra=_extra  & cmdind_m+=1
18e4331f   Ilyes Choubani   general update (f...
501

af5bca1f   Ilyes Choubani   general update
502
      endif else begin ;polfrac exists
18e4331f   Ilyes Choubani   general update (f...
503

af5bca1f   Ilyes Choubani   general update
504
505
         if  ~iswinsed then begin
             cmdind_m = !dustemcgwin_ncmds.polfrac.pl
5f04fa07   Ilyes Choubani   general update
506
             cgwindow,'dustemcgwin_dataset', st, dustem_polfrac,SP_spec,SED_spec, dataset='polfrac', /refresh ,position=p_spsed, winid=winid_m,/replacecmd,cmdindex=cmdind_m, _extra=_extra
af5bca1f   Ilyes Choubani   general update
507
508
509
510
             
         endif else begin
         ;stop
             cgwindow,'dustemcgwin_dataset', st, dataset='polfrac', position=p_spsed, /addcmd, winid=winid_m, _extra=_extra & cmdind_m+=1
5f04fa07   Ilyes Choubani   general update
511
             cgwindow,'dustemcgwin_dataset', st, dustem_polfrac,SP_spec,SED_spec, dataset='polfrac', /refresh ,position=p_spsed, /addcmd, winid=winid_m, _extra=_extra & cmdind_m+=1
af5bca1f   Ilyes Choubani   general update
512
             !dustemcgwin_ncmds.polfrac.pl = cmdind_m
18e4331f   Ilyes Choubani   general update (f...
513

af5bca1f   Ilyes Choubani   general update
514
515
         endelse       
      endelse  
5f04fa07   Ilyes Choubani   general update
516
      
18e4331f   Ilyes Choubani   general update (f...
517

5f04fa07   Ilyes Choubani   general update
518
519
    ENDIF
        
67bd858a   Ilyes Choubani   Replication of th...
520
   ; end_m:
2910e8ce   Ilyes Choubani   Draft version of ...
521
    
2910e8ce   Ilyes Choubani   Draft version of ...
522
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532
    ;cgcontrol, update=1
;     varrr=cgquery(dimensions=dim_m) ;be careful because the dim_m array can be multi-dimensional because of the presence of two windows.
;     cgcontrol, update=1
;     cgcontrol, resize=[dim_m(0),dim_m(1)]
;     
    ;cgcontrol, resize=1
;     cgcontrol,update=1
;     cgcontrol,update=1
        
;     cgcontrol, resize=[!D.X_SIZE,!D.Y_SIZE]
    
2910e8ce   Ilyes Choubani   Draft version of ...
533
    ;cgcontrol, update=1
5f04fa07   Ilyes Choubani   general update
534
535
536
537
538
539
540
541
    ;cgcontrol, update=0
    
    
 ;   cgcontrol, update=1 
    
    
    
    
2910e8ce   Ilyes Choubani   Draft version of ...
542
    ;varr=cgquery(dimensions=dim_m,objectref=winobj_m)
18e4331f   Ilyes Choubani   general update (f...
543
   ;stop
5f04fa07   Ilyes Choubani   general update
544
545
    cgcontrol, winid_m, execute=1
    ;cgcontrol, winid_m, execute=0      
2910e8ce   Ilyes Choubani   Draft version of ...
546
         
5f04fa07   Ilyes Choubani   general update
547
548
549
ENDIF 


67bd858a   Ilyes Choubani   Replication of th...
550
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; 
if test_x then begin
    ;Generating extinction window and saving window ID
    
    if iswinext then begin
        
        if !run_pol then cgwindow,wxsize=910,wysize=658,wtitle='DUSTEMWRAP v2.0 (EXTINCTION)' else cgwindow, wtitle='DUSTEMWRAP v2.0 (EXTINCTION)';, wback='grey';,wobject=winobj_m
        winid_x = cgquery(dimensions=dim_x,/current) ;this has to be changed because the dimensions of this array change with the data sets present (extinction/emission).
        !dustemcgwin_id.ext = winid_x
        
        cgcontrol, winid_x, execute=0
        ;cgset, winid_m
        ;Plotting model string (legend)
        xxpos = 0.015
        yypos = 0.97
        ;Plotting Hydrogen column density string (legend)
        cgtext, xxpos, yypos,'Model : '+!dustem_model,color=0,/normal,charsize = 1.2,/addcmd ;& cmdind_m+=1 This is the first command in the window
        yypos = 0.95
        cgtext, xxpos, yypos,textoidl('N_{H}')+textoidl(' (H/cm^2) : ')+strmid(string(*!dustem_HCD,format='(1E10.2)'),2),color=0,/normal,charsize = 1.2,/addcmd & cmdind_x+=1
        
        ;Plotting of the number of iterations completed by the fitter
        
        ;Plotting of the number of runs
        ;Getting the width of the unrefreshed string
        widthtot=0.
        cgtext, xxpos, yypos,'Runs : ',color=0,/normal,charsize=-1,width=thiswidth,/addcmd & cmdind_x+=1
        widthtext = thiswidth
        widthtot+= thiswidth ;fixed width
        !dustemcgwin_ncmds.runs.txtwdth = thiswidth
        
        ;Getting the width of the refreshed string
        cgtext, xxpos, yypos,strtrim(!dustem_iter.act,2),color=0,/normal,charsize=-1,width=thiswidth,/addcmd & cmdind_x+=1
        widthtot+= thiswidth;varying width        
        
        ;These two lines will also have to      be modified when plotting the refreshed values
        xxpos = 0.015 ;1.0 - widthtot - 0.03
        yypos = 0.015
        
        ;Displaying fixed part
        cgtext, xxpos, yypos,'Runs : ',color=0,/normal,charsize = 1.35,/addcmd & cmdind_x+=1
        ;Displaying refreshed part (first run . This is the command that will be replaced)
        cgtext, xxpos + widthtext + 0.015 , yypos,strtrim(!dustem_iter.act,2),color=0,/normal,charsize = 1.0,/addcmd & cmdind_x+=1
        ;saving the command id to replace it
        !dustemcgwin_ncmds.runs.pl = cmdind_x

        ;plotting of (mostly) fixed data for rchi2
        ;Since the format of the strings is specified, the length/width of the string in thex direction is fixed. 
        
        
        ;Getting the width of the unrefreshed string
        widthtot=0.
        cgtext, xxpos, yypos,textoidl('\chi^{2} : '),color=0,/normal,charsize=-1,width=thiswidth,/addcmd & cmdind_x+=1
        widthtext = thiswidth
        widthtot+= thiswidth ;fixed width
        
        ;Getting the width of the refresh.ed string
        cgtext, xxpos, yypos,strtrim(string(chi2,format=frmt2),2),color=0,/normal,charsize=-1,width=thiswidth,/addcmd & cmdind_x+=1
        widthtot+= thiswidth;varying width        
        ;saving the command string width to replace it
        !dustemcgwin_ncmds.chi2.txtwdth = thiswidth
        
        
        xxpos = 1.0 - widthtot - 0.03
        
        yypos = 0.97
        
        ;Displaying fixed part
        cgtext, xxpos, yypos,textoidl('\chi^{2} : '),color=0,/normal,charsize = 1.0,/addcmd & cmdind_x+=1
        ;Displaying refreshed part (first run . This is the command that will be replaced)
        
        cgtext, xxpos + widthtext , yypos,strtrim(string(chi2,format=frmt2),2),color=0,/normal,charsize = 1.0,/addcmd & cmdind_x+=1
        
        ;saving the command id to replace it
        !dustemcgwin_ncmds.chi2.pl = cmdind_x
  
        
        
        ;plotting of (mostly) fixed data for rchi2
        
        ;Getting the width of the unrefreshed string
        widthtot=0.
        cgtext, xxpos, yypos,textoidl('r_{\chi^{2}} : '),color=0,/normal,charsize=-1,width=thiswidth,/addcmd & cmdind_x+=1
        widthtext = thiswidth
        widthtot+= thiswidth ;fixed width
        ;!dustemcgwin_ncmds.rchi2.txtwdth1 = thiswidth
        ;Getting the width of the refreshed string
        cgtext, xxpos, yypos,strtrim(string(rchi2,format=frmt2),2),color=0,/normal,charsize=-1,width=thiswidth,/addcmd & cmdind_x+=1
        widthtot+= thiswidth;varying width        
        !dustemcgwin_ncmds.rchi2.txtwdth = thiswidth
        ;These two lines will also have to      be modified when plotting the refreshed values
        xxpos = 1.0 - widthtot - 0.03
        yypos = 0.95
        
        ;Displaying fixed part
        cgtext, xxpos, yypos,textoidl('r_{\chi^{2}} : '),color=0,/normal,charsize = 1.35,/addcmd & cmdind_x+=1
        ;Displaying refreshed part (first run . This is the command that will be replaced)
        cgtext, xxpos + widthtext , yypos,strtrim(string(rchi2,format=frmt2),2),color=0,/normal,charsize = 1.0,/addcmd & cmdind_x+=1
        ;saving the command id to replace it
        !dustemcgwin_ncmds.rchi2.pl = cmdind_x
        
        
        ;Plotting of the title of the dashboard (plot(s))
        
        ;NB: JP is right, the user should be able to set the entirety of the title.
        ;Make this block aware of the saving of the data  (from the fits table)
        
        
        ;Getting the width of the title 
        tit=string(_extra.title);
    
        cgtext, 0.3, 0.95,tit+' (RUNNING)',color=0,/normal,charsize=-1,width=thiswidth,/addcmd & cmdind_x+=1
        widthtot = thiswidth
        xxpos = (1 - thiswidth)/2
        yypos = 0.96
        
        cgtext, 0.3, 0.95,tit,color=0,/normal,charsize=-1,width=thiswidth,/addcmd & cmdind_x+=1 
        !dustemcgwin_ncmds.pltit.txtwdth = thiswidth*1.6 + (1 - widthtot)/2
          
        cgtext, xxpos, yypos,tit,color=0,/normal,charsize = 1.6,/addcmd & cmdind_x+=1
        xxpos+=thiswidth*1.6
        cgtext, xxpos, yypos,' (RUNNING)',color=0,/normal,charsize = 1.6,/addcmd & cmdind_x+=1
        
        !dustemcgwin_ncmds.pltit.pl = cmdind_x
        
    endif else begin 
    
        
        winid_x = !dustemcgwin_id.ext
        cgcontrol, winid_x, execute=0
        cgset, winid_x ;apparently specifying the window index isn't enough. This might be because of the use of cgcontrol
        
        ;Refreshing chi2 data: 
        cmdin_m = !dustemcgwin_ncmds.chi2.pl
        xxpos = 1 - !dustemcgwin_ncmds.chi2.txtwdth - 0.03  
        yypos = 0.97
        cgwindow,'cgtext', xxpos , yypos,strtrim(string(chi2,format=frmt2),2),color=0,/normal,charsize = 1.0,/replacecmd,cmdindex=cmdin_x, winid=winid_x ;& cmdind_m+=1
        
        
        
        ;Refreshing rchi2 data: 
        cmdin_m = !dustemcgwin_ncmds.rchi2.pl
        xxpos = 1 - !dustemcgwin_ncmds.rchi2.txtwdth - 0.03  
        yypos = 0.95
        cgwindow,'cgtext', xxpos , yypos,strtrim(string(rchi2,format=frmt2),2),color=0,/normal,charsize = 1.0,/replacecmd,cmdindex=cmdin_x, winid=winid_x ;& cmdind_m+=1
        
        
        ;Refreshing number of runs data: 
        cmdin_m = !dustemcgwin_ncmds.runs.pl
        xxpos = 0.03 + !dustemcgwin_ncmds.runs.txtwdth*1.35  ;(because of charsize)
        yypos = 0.015
        cgwindow,'cgtext', xxpos , yypos,strtrim(!dustem_iter.act,2),color=0,/normal,charsize = 1.0,/replacecmd,cmdindex=cmdin_x, winid=winid_x ;& cmdind_m+=1
        
          
        ;update of the title here ?
        ;NB: JP is right, the user should be able to set the entirety of the title.
        ;Make this block aware of the saving of the data  (from the fits table)
        
        if isa((*!dustem_fit).current_param_values) then begin
            ;replacing my count - 3
            tit=string(_extra.title)
            cmdin_x = !dustemcgwin_ncmds.pltit.pl
            
            xxpos = !dustemcgwin_ncmds.pltit.txtwdth
            yypos = 0.96
        
            cgwindow,'cgtext', xxpos , yypos,' (Final Run)',color=0,/normal,charsize = 1.6,/replacecmd,cmdindex=cmdin_x, winid=winid_x  
        
        endif
    
    endelse
    
    ;cgWindow_GetDefs,xsize=xsize,ysize=ysize
    ;cgcontrol, resize=[xsize,ysize]
    if !run_pol then begin
        ;,wback='grey'
        
        ;position arrays for plot and normalized graph
        
        ;THIS IS HARD-CODED IN A VERY SILLY WAY
        
        p_ext = [0.05,0.67,0.475,0.90]
        p_pext = [0.525,0.67,0.95,0.90]
        p_spext = [0.05,0.375,0.475,0.575] ; Should we plot this? tau_polext/tau_ext_tot. YES FOR NOW...
        p_psiext = [0.525,0.375,0.95,0.575]
        p_qext = [0.05,0.12,0.475,0.35]  
        p_uext = [0.525,0.12,0.95,0.35]
        
        np_ext = [0.05,0.60,0.475,0.67]
        np_pext = [0.525,0.60,0.95,0.67]
        np_qext = [0.05,0.05,0.475,0.12] 
        np_uext = [0.525,0.05,0.95,0.12]
        
        p_ext[1]+= 0.0125 & p_ext[3]+= 0.0125 
        p_pext[1]+= 0.0125 & p_pext[3]+= 0.0125
        p_spext[1]+= 0.0125 & p_spext[3]+= 0.0125
        p_psiext[1]+= 0.0125 & p_psiext[3]+= 0.0125
        p_qext[1]+= 0.0125 & p_qext[3]+= 0.0125
        p_uext[1]+= 0.0125 & p_uext[3]+= 0.0125
        
        np_ext[1]+= 0.0125 & np_ext[3]+= 0.0125 
        np_pext[1]+= 0.0125 & np_pext[3]+= 0.0125
        np_qext[1]+= 0.0125 & np_qext[3]+= 0.0125
        np_uext[1]+= 0.0125 & np_uext[3]+= 0.0125
        
        
          
    endif else begin
        p_ext  = [0.07,0.30,0.97,0.85]
        np_ext = [0.07,0.10,0.97,0.30]
    
    endelse

    ;Plotting of sed data axes (whether or not data is present)
    plotsym,0,/fill ;you might need to execute this again. hmm...


    ;This is not the right test the user might want to show the prediction for sed and fit the stokes parameters
    if ~test_ext then begin ; EXT data is not present (For completeness) # This is only valid when !run_pol=1
        
        cgwindow,'dustemcgwin_dataset', st, dataset='EXT', /nodata, position=p_ext, /addcmd, winid=winid_x, _extra=_extra & cmdind_x+=1
        cgwindow,'dustemcgwin_dataset', st, dataset='EXT', /nodata, /norm, position=np_ext, /addcmd, winid=winid_x, _extra=_extra & cmdind_x+=1

    endif else begin ;EXT exists

        if  ~iswinext then begin
        
            cmdind_m = !dustemcgwin_ncmds.ext.pl
            cgwindow,'dustemcgwin_dataset', st, dustem_ext,EXT_spec,dataset='EXT', /refresh ,position=p_ext, winid=winid_x,cmdindex=cmdind_x,/replacecmd,_extra=_extra     
            
            cmdind_m = !dustemcgwin_ncmds.ext.nrm
            cgwindow,'dustemcgwin_dataset', st, dustem_ext,EXT_spec,dataset='EXT', /norm, /refresh,position=np_ext, winid=winid_x,cmdindex=cmdind_x,/replacecmd,_extra=_extra
            
            
        endif else begin
      
            cgwindow,'dustemcgwin_dataset', st, dataset='EXT', position=p_ext, /addcmd, winid=winid_x, _extra=_extra & cmdind_x+=1 
            cgwindow,'dustemcgwin_dataset', st, dustem_ext,EXT_spec, dataset='EXT', /refresh ,position=p_ext, /addcmd, winid=winid_x, _extra=_extra & cmdind_x+=1
            !dustemcgwin_ncmds.ext.pl = cmdind_x
            
            cgwindow,'dustemcgwin_dataset', st, dataset='EXT',/norm, position=np_ext, /addcmd, winid=winid_x, _extra=_extra & cmdind_x+=1 ;I think nodata can also be used too
            
            cgwindow,'dustemcgwin_dataset', st, dustem_ext,EXT_spec, dataset='EXT', /norm, /refresh,position=np_ext, /addcmd ,winid=winid_x, _extra=_extra & cmdind_x+=1
            !dustemcgwin_ncmds.ext.nrm = cmdind_x
              
        endelse       
    endelse
    
    ;if ~!run_pol then begin;I don't think the order of the  ;goto, end_x
      if !run_pol then begin ;then goto, end_x
        
        if ~test_qext then begin ;Qext is not present
            
            cgwindow,'dustemcgwin_dataset', st, dataset='QEXT', /nodata, position=p_qext, /addcmd, winid=winid_x, _extra=_extra & cmdind_x+=1
            cgwindow,'dustemcgwin_dataset', st, dataset='QEXT', /nodata, /norm, position=np_qext, /addcmd, winid=winid_x, _extra=_extra & cmdind_x+=1
        
        endif else begin ;Qext data is present
                
            if  ~iswinext then begin
                cmdind_x = !dustemcgwin_ncmds.qext.pl
                ;refreshing the positive_only and negative_only plots if data is present in them
                cgwindow,'dustemcgwin_dataset', st, dustem_qext,QEXT_spec,EXT_spec,dataset='QEXT',/positive_only, nodata=0, /refresh ,position=p_qext, winid=winid_x,/replacecmd,cmdindex=cmdind_x, _extra=_extra
                
                cgwindow,'dustemcgwin_dataset', st, dustem_qext,QEXT_spec,EXT_spec, dataset='QEXT',/negative_only, nodata=0, /refresh ,position=p_qext, winid=winid_x,/replacecmd,cmdindex=cmdind_x, _extra=_extra
                
                cmdind_x = !dustemcgwin_ncmds.qext.nrm
                cgwindow,'dustemcgwin_dataset', st, dustem_qext,QEXT_spec,EXT_spec, dataset='QEXT', /refresh, nodata=0, /norm,position=np_qext, winid=winid_x,/replacecmd,cmdindex=cmdind_x, _extra=_extra
                
            endif else begin
                
                ;Plotting of postive values if they exist (if hidden data is present it is plotted if not an empty plot is rendered)
                cgwindow,'dustemcgwin_dataset', st, dataset='QEXT', position=p_qext, /addcmd, winid=winid_x,/positive_only, _extra=_extra & cmdind_x+=1
                ;Refreshing the positive_only plot ONLY if there is data. If not do nothing
                cgwindow,'dustemcgwin_dataset', st, dustem_qext,QEXT_spec,EXT_spec, dataset='QEXT',/positive_only, /refresh ,position=p_qext, /addcmd, winid=winid_x, _extra=_extra & cmdind_x+=1
                
                cgwindow,'dustemcgwin_dataset', st, dataset='QEXT', position=p_qext, /addcmd, winid=winid_x,/negative_only, _extra=_extra & cmdind_x+=1
                ;Refreshing the negative_only plot ONLY if there is data. If not do nothing
                cgwindow,'dustemcgwin_dataset', st, dustem_qext,QEXT_spec,EXT_spec,dataset='QEXT',/negative_only, /refresh ,position=p_qext, /addcmd, winid=winid_x, _extra=_extra & cmdind_x+=1
            
                !dustemcgwin_ncmds.qext.pl = cmdind_x
                
                
                cgwindow,'dustemcgwin_dataset', st, dataset='QEXT',/norm, position=np_qext, /addcmd, winid=winid_x, _extra=_extra & cmdind_x+=1 ;I think nodata can also be uqsed too
                cgwindow,'dustemcgwin_dataset', st, dustem_qext,QEXT_spec,EXT_spec,dataset='QEXT', /norm, /refresh,position=np_qext, /addcmd, winid=winid_x, _extra=_extra & cmdind_x+=1
                !dustemcgwin_ncmds.qext.nrm = cmdind_x
                
        endelse       
      endelse
          ;stop        
        if ~test_uext then begin ;uext is not present
            
            cgwindow,'dustemcgwin_dataset', st, dataset='UEXT', /nodata, position=p_uext, /addcmd, winid=winid_x, _extra=_extra & cmdind_x+=1
            cgwindow,'dustemcgwin_dataset', st, dataset='UEXT', /nodata, /norm, position=np_uext, /addcmd, winid=winid_x, _extra=_extra & cmdind_x+=1
        
        endif else begin ;uext data is present
                
            if  ~iswinext then begin
                cmdind_x = !dustemcgwin_ncmds.uext.pl
                ;refreshing the positive_only and negative_only plots if data is present in them
                cgwindow,'dustemcgwin_dataset', st, dustem_uext,UEXT_spec,EXT_spec, dataset='UEXT',/positive_only, /refresh, nodata=0 ,position=p_uext, winid=winid_x,/replacecmd,cmdindex=cmdind_x, _extra=_extra
                
                cgwindow,'dustemcgwin_dataset', st, dustem_uext,UEXT_spec,EXT_spec, dataset='UEXT',/negative_only, /refresh, nodata=0 ,position=p_uext, winid=winid_x,/replacecmd,cmdindex=cmdind_x, _extra=_extra
                
                cmdind_m = !dustemcgwin_ncmds.uext.nrm
                cgwindow,'dustemcgwin_dataset', st, dustem_uext,UEXT_spec,EXT_spec, dataset='UEXT', /refresh, nodata=0, /norm,position=np_uext, winid=winid_x,/replacecmd,cmdindex=cmdind_x, _extra=_extra
                
            endif else begin
            ;stop
                ;Plotting of postive values if they exist (if hidden data is present it is plotted if not an empty plot is rendred)
                cgwindow,'dustemcgwin_dataset', st, dataset='UEXT', position=p_uext, /addcmd, winid=winid_x,/positive_only, _extra=_extra & cmdind_x+=1
                ;Refreshing the positive_only plot ONLY if there is data. If not do nothing
                cgwindow,'dustemcgwin_dataset', st, dustem_uext,UEXT_spec,EXT_spec, dataset='UEXT',/positive_only, /refresh ,position=p_uext, /addcmd, winid=winid_x, _extra=_extra & cmdind_x+=1
                
                cgwindow,'dustemcgwin_dataset', st, dataset='UEXT', position=p_uext, /addcmd, winid=winid_x,/negative_only, _extra=_extra & cmdind_x+=1
                ;Refreshing the negative_only plot ONLY if there is data. If not do nothing
                cgwindow,'dustemcgwin_dataset', st, dustem_uext,UEXT_spec,EXT_spec, dataset='UEXT',/negative_only, /refresh ,position=p_uext, /addcmd, winid=winid_x, _extra=_extra & cmdind_x+=1
                
                !dustemcgwin_ncmds.uext.pl = cmdind_x
                
                cgwindow,'dustemcgwin_dataset', st, dataset='UEXT',/norm, position=np_uext, /addcmd, winid=winid_x, _extra=_extra & cmdind_x+=1 ;I think nodata can also be uused too
                cgwindow,'dustemcgwin_dataset', st, dustem_uext,UEXT_spec,EXT_spec, dataset='UEXT', /norm, /refresh,position=np_uext, /addcmd, winid=winid_x, _extra=_extra & cmdind_x+=1
                !dustemcgwin_ncmds.uext.nrm = cmdind_x
                
        endelse       
      endelse
      
      if ~test_psi_ext then begin ; psi_ext data is not present (For completeness) # This is only valid when !run_pol=1
          
          cgwindow,'dustemcgwin_dataset', st, dataset='psi_ext', /nodata, position=p_psiext, /addcmd, winid=winid_x, _extra=_extra  & cmdind_x+=1

      endif else begin ;psi_ext exists

          if  ~iswinext then begin
              cmdind_x = !dustemcgwin_ncmds.psi_ext.pl
              cgwindow,'dustemcgwin_dataset', st, dustem_psi_ext,PSIEXT_spec,EXT_spec, dataset='psi_ext', /refresh ,position=p_psiext, winid=winid_x,/replacecmd,cmdindex=cmdind_x, _extra=_extra
              
          endif else begin
          ;stop
              cgwindow,'dustemcgwin_dataset', st, dataset='psi_ext', position=p_psiext, /addcmd, winid=winid_x, _extra=_extra & cmdind_x+=1
              cgwindow,'dustemcgwin_dataset', st, dustem_psi_ext,PSIEXT_spec,EXT_spec, dataset='psi_ext', /refresh ,position=p_psiext, /addcmd, winid=winid_x, _extra=_extra & cmdind_x+=1
              !dustemcgwin_ncmds.psi_ext.pl = cmdind_x

          endelse       
      endelse
        
      
      if ~test_polext then begin ; polext data is not present (For completeness) # This is only valid when !run_pol=1
          
          cgwindow,'dustemcgwin_dataset', st, dataset='polext', /nodata, position=p_pext, /addcmd, winid=winid_x, _extra=_extra & cmdind_x+=1
          cgwindow,'dustemcgwin_dataset', st, dataset='polext', /nodata, /norm, position=np_pext, /addcmd, winid=winid_x, _extra=_extra & cmdind_x+=1

      endif else begin ;polext exists

          if  ~iswinext then begin
              cmdind_x = !dustemcgwin_ncmds.polext.pl
              cgwindow,'dustemcgwin_dataset', st, dustem_polext,POLEXT_spec, dataset='polext', /refresh ,position=p_pext, winid=winid_x,/replacecmd,cmdindex=cmdind_x, _extra=_extra
              cmdind_x = !dustemcgwin_ncmds.polext.nrm
              cgwindow,'dustemcgwin_dataset', st, dustem_polext,POLEXT_spec, dataset='polext', /norm, /refresh,position=np_pext, winid=winid_x,/replacecmd,cmdindex=cmdind_x, _extra=_extra
          endif else begin
          ;stop
              cgwindow,'dustemcgwin_dataset', st, dataset='polext', position=p_pext, /addcmd, winid=winid_x, _extra=_extra  & cmdind_x+=1  
              cgwindow,'dustemcgwin_dataset', st, dustem_polext,POLEXT_spec, dataset='polext', /refresh ,position=p_pext, /addcmd, winid=winid_x, _extra=_extra & cmdind_x+=1
              !dustemcgwin_ncmds.polext.pl = cmdind_x
              cgwindow,'dustemcgwin_dataset', st, dataset='polext',/norm, position=np_pext, /addcmd, winid=winid_x, _extra=_extra & cmdind_x+=1 ;I think nodata can also be upolsed too
              cgwindow,'dustemcgwin_dataset', st, dustem_polext,POLEXT_spec, dataset='polext', /norm, /refresh,position=np_pext, /addcmd, winid=winid_x, _extra=_extra & cmdind_x+=1
              !dustemcgwin_ncmds.polext.nrm = cmdind_x
          endelse
      endelse      
      
      
      if ~test_fpolext then begin ; fpolext data is not present (For completeness) # This is only valid when !run_pol=1
          
          cgwindow,'dustemcgwin_dataset', st, dataset='fpolext', /nodata, position=p_spext, /addcmd, winid=winid_x, _extra=_extra  & cmdind_x+=1

      endif else begin ;fpolext exists

          if  ~iswinext then begin
              cmdind_x = !dustemcgwin_ncmds.fpolext.pl
              cgwindow,'dustemcgwin_dataset', st, dustem_fpolext,SPEXT_spec,EXT_spec, dataset='fpolext', /refresh ,position=p_spext, winid=winid_x,/replacecmd,cmdindex=cmdind_x, _extra=_extra
              
          endif else begin
          ;stop
              cgwindow,'dustemcgwin_dataset', st, dataset='fpolext', position=p_spext, /addcmd, winid=winid_x, _extra=_extra & cmdind_x+=1
              cgwindow,'dustemcgwin_dataset', st, dustem_fpolext,SPEXT_spec,EXT_spec, dataset='fpolext', /refresh ,position=p_spext, /addcmd, winid=winid_x, _extra=_extra & cmdind_x+=1
              !dustemcgwin_ncmds.fpolext.pl = cmdind_x

          endelse       
      endelse  
      

    ENDIF
        
   ; end_x:
    
    ;cgcontrol, update=1
;     varrr=cgquery(dimensions=dim_m) ;be careful because the dim_m array can be multi-dimensional because of the presence of two windows.
;     cgcontrol, update=1
;     cgcontrol, resize=[dim_m(0),dim_m(1)]
;     
    ;cgcontrol, resize=1
;     cgcontrol,update=1
;     cgcontrol,update=1
        
;     cgcontrol, resize=[!D.X_SIZE,!D.Y_SIZE]
    
    ;cgcontrol, update=1
    ;cgcontrol, update=0
    
    
  ;   cgcontrol, update=1 
    
    
    ;varr=cgquery(dimensions=dim_m,objectref=winobj_m)
    ;stop
    cgcontrol, winid_x, execute=1
    ;cgcontrol, winid_m, execute=0      
          
ENDIF 


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;Plotting of the parameter and plugin values / This will have to be placed after the extinction block which hasn't been 
;written yet. 

;This block will be different because it does not depend on wether dustemwrap is used in polarization or not
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;stop
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;Plotting the parameter window 
;cgcontrol, execute=0
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IF ~iswinprms THEN BEGIN;(NEXT RUNS)
    
    winid_prms = !dustemcgwin_id.prms
    cgcontrol, winid_prms, execute=0
    cgset, winid_prms
    cmdind_prms = !dustemcgwin_ncmds.prms.pl
    cgwindow,'dustemcgwin_dataset', st, res, errors, p_dim,dataset='PARAMETERS', /refresh, winid=winid_prms,/replacecmd,cmdindex=cmdind_prms, _extra=_extra
    cgcontrol, winid_prms ,execute=1 
ENDIF ELSE BEGIN ;(FIRST RUN)
    cgwindow,wxsize=350,wysize=200,wtitle='DUSTEMWRAP v2.0 (PARAMETERS)' ; keeping the same y dimension of the emission/extinction plot? 
    winid_prms = cgquery(dimensions=dim_prms,/current) ;we don't need the dimension of the window so far/ I don't know why I needed it before
    cgcontrol, winid_prms, execute=0
    !dustemcgwin_id.prms = winid_prms
    cgwindow,'dustemcgwin_dataset', st, res, errors, p_dim,dataset='PARAMETERS', /addcmd , winid=winid_prms,_extra=_extra ;& cmdind_prms+=1
    cgwindow,'dustemcgwin_dataset', st, res, errors, p_dim,dataset='PARAMETERS', /addcmd, /refresh , winid=winid_prms, _extra=_extra & cmdind_prms+=1
    !dustemcgwin_ncmds.prms.pl = cmdind_prms
    cgcontrol, winid_prms ,execute=1        
ENDELSE 

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67bd858a   Ilyes Choubani   Replication of th...
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;DISPLAY OF PLUGINS HAS A SMALL ISSUE
IF (tag_names(*!dustem_plugin))(0) NE 'NONE' THEN BEGIN ;this will display an empty window when the plugin is only calle with a fixed value. 

    IF ~iswinplgns THEN BEGIN;(NEXT RUNS)
        
        winid_plgns = !dustemcgwin_id.plgns
        cgcontrol, winid_plgns, execute=0
        cgset, winid_plgns
        cmdind_plgns = !dustemcgwin_ncmds.plgns.pl
        cgwindow,'dustemcgwin_dataset', st, res, errors, p_dim,dataset='PLUGINS', /refresh, winid=winid_plgns,/replacecmd,cmdindex=cmdind_plgns, _extra=_extra
        cgcontrol, winid_plgns ,execute=1 
    ENDIF ELSE BEGIN ;(FIRST RUN)
        cgwindow,wxsize=350,wysize=200,wtitle='DUSTEMWRAP v2.0 (PLUGINS)' ; keeping the same y dimension of the emission/extinction plot? 
        winid_plgns = cgquery(dimensions=dim_plgns,/current) ;we don't need the dimension of the window so far/ I don't know why I needed it before
        cgcontrol, winid_plgns, execute=0
        !dustemcgwin_id.plgns = winid_plgns
        cgwindow,'dustemcgwin_dataset', st, res, errors, p_dim,dataset='PLUGINS', /addcmd , winid=winid_plgns,_extra=_extra ;& cmdind_prms+=1
        cgwindow,'dustemcgwin_dataset', st, res, errors, p_dim,dataset='PLUGINS', /addcmd, /refresh , winid=winid_plgns, _extra=_extra & cmdind_plgns+=1
        !dustemcgwin_ncmds.plgns.pl = cmdind_plgns
        cgcontrol, winid_plgns ,execute=1        
    ENDELSE
     
ENDIF
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END