PRO dustem_plot_mlog,x,y,help=help,ppositions=ppositions,dy=dy,positive_only=positive_only,negative_only=negative_only,rms=rms,overplot=overplot,color=color,nodata=nodata,_extra=_extra;,overplot=overplot,nodata=nodata

;+
; NAME:
;     plot_negative_log
; CALLING SEQUENCE:
;     plot_negative_log,x,y,_extra=_extra
; PURPOSE:
;     plots an array in log scale including negative values in two half-plots
; INPUTS:
;     x = x vector to plot
;     y = y vector to plot
; OPTIONAL INPUT:
;     ppositions = a 4-element vector for global plot position in the window
;     dy = fractional distance between the two half-plots along y
; ACCEPTED KEY-WORDS:
;     _extra is filtered and passed to cgplot
; EXAMPLES
;x=[0,1,2,3,4,7,12] & y=[1.e-2,2,-1,-2,-5,-10,-50.]
;dustem_plot_mlog,x,y,xtitle='x',ytitle='y',xrange=[-1,15],/xsty,yrange=[0.001,100],/ysty,ppositions=[0.3,0.2,0.8,0.9],dy=0.001
;x=lindgen(1000)/500. & y=sin(x*10)*exp(-x*2.)*1.e2
;dustem_plot_mlog,x,y,xtitle='x',ytitle='y',xrange=[-0.1,2.],/xsty,yrange=[0.001,100],/ysty
;
; OUTPUTS:
;     None
; OPTIONAL OUTPUTS:
;     None
; PROCEDURE AND SUBROUTINE USED
;     
; COMMONS:
;   
; SIDE EFFECTS:
;     The two half plots are forced to have the same (reflected) y axis.
; MODIFICATION HISTORY:
;    written 28-06-22 by Jean-Philippe Bernard
;-

IF keyword_set(help) THEN BEGIN
  doc_library,'dustem_plot_mlog'
  goto,sortie
ENDIF

defsysv,'!previous_yrange',exist=exist
IF not exist THEN defsysv,'!previous_yrange',ptr_new()

indpos=where(y GT 0,countpos)
indneg=where(y LT 0,countneg)
maskpos=y*0
maskneg=y*0
maskpos[indpos]=1
maskneg[indneg]=1

df_pos=find_ind(maskpos,1,count=count_pos_regions)
df_neg=find_ind(maskneg,1,count=count_neg_regions)

Nx=1 & Ny=2
IF not keyword_set(ppositions) THEN BEGIN
	x0=0.10 & y0=0.10
	x1=0.90 & y1=0.90
ENDIF ELSE BEGIN
	x0=ppositions[0] & y0=ppositions[1]
	x1=ppositions[2] & y1=ppositions[3]
ENDELSE

dx=0.;15    ;not used anywy for this plot
use_dy=0.005;.05

IF keyword_set(dy) THEN BEGIN
	use_dy=dy
ENDIF

pp=make_ppositions(x0,y0,x1,y1,dx,use_dy,Nx,Ny,xtit_plot=xtit_plot,ytit_plot=ytit_plot, $
                  noerase=noerase,xcharsize=xcharsize,ycharsize=ycharsize);,/silent)

;noerase=[1,1]

;stop
;i=0L

IF countpos NE 0 THEN BEGIN
	IF not keyword_set(negative_only) THEN BEGIN

	 pos=pp[*,0]
	 ;if keyword_set(color) then _extrabis.color=color 

	 stop

	 if keyword_set(overplot) then begin
         FOR k=0L,count_pos_regions-1 DO BEGIN
       	   
       	  	if keyword_set(rms) then begin ;Should this be combined with the overplot command? 

       	  	cgerrplot,x[df_pos[k,0]:df_pos[k,1]],y[df_pos[k,0]:df_pos[k,1]]-rms[df_pos[k,0]:df_pos[k,1]],y[df_pos[k,0]:df_pos[k,1]]+rms[df_pos[k,0]:df_pos[k,1]],color=color;,_extra=_extra

   	  	    endif else cgoplot,x[df_pos[k,0]:df_pos[k,1]],y[df_pos[k,0]:df_pos[k,1]],color=color,_extra=_extra

   	     ENDFOR           	 
	 
	 endif else begin
        	 
      
      if keyword_set(nodata) then begin

          cgplot,x[indpos],y[indpos],pos=pos,xs=1,yr=yr,noerase=1,xcharsize=xcharsize[0],ycharsize=ycharsize[0],/ylog,/nodata,color=color,ytickformat='dstmwrp_exp',_extra=_extra   	 

	 endif else begin
        	 cgplot,x[indpos],y[indpos],pos=pos,xs=1,yr=yr,noerase=1,xcharsize=xcharsize[0],ycharsize=ycharsize[0],/ylog,color=color,ytickformat='dstmwrp_exp',_extra=_extra
	 endelse
	 

	 endelse
	 
	 
	 ENDIF
endif

IF countneg NE 0 THEN BEGIN
	IF not keyword_set(positive_only) THEN BEGIN

		pos=pp[*,1]
		;stop
		yrange=!y.crange
        !previous_yrange=ptr_new(yrange) 
        
        new_yrange=10^[(*!previous_yrange)[1],(*!previous_yrange)[0]]
                
        IF keyword_set(_extra) THEN BEGIN
        	
        	_extrabis=modify_extra('YR',new_yrange,/replace,_extra=_extra) ; add exchange option
        	
        ENDIF
        
        if keyword_set(overplot) then begin
            FOR k=0L,count_neg_regions-1 DO BEGIN
          	
        		  	if keyword_set(rms) then begin ;Should this be combined with the overplot command? 

                	  	cgerrplot,x[df_neg[k,0]:df_neg[k,1]],-1*y[df_neg[k,0]:df_neg[k,1]]-rms[df_neg[k,0]:df_neg[k,1]],-1*y[df_neg[k,0]:df_neg[k,1]]+rms[df_neg[k,0]:df_neg[k,1]],color=color;,ytickformat='(A)'

                	  	;color by default otherwise it's _extra supercedes. Let's see how this reacts to the plotting of U
            	  	endif else cgoplot,x[df_neg[k,0]:df_neg[k,1]],-1.*y[df_neg[k,0]:df_neg[k,1]],color=color,_extra=_extra
    		
        		ENDFOR            
        
        endif else begin
            
            	!dustem_mlog=1
        		if keyword_set(nodata) then begin

            		cgplot,x[indneg],-1.*y[indneg],pos=pos,xs=1,noerase=1,xcharsize=xcharsize[1],ycharsize=ycharsize[1],/ylog,color=color,/nodata,yrange=new_yrange,ytickformat='dstmwrp_exp',_extra=_extrabis	

             endif else begin

                 cgplot,x[indneg],-1.*y[indneg],pos=pos,xs=1,noerase=1,xcharsize=xcharsize[1],ycharsize=ycharsize[1],/ylog,color=color,yrange=new_yrange,ytickformat='dstmwrp_exp',_extra=_extrabis

             endelse   
            !dustem_mlog=0
        endelse
        		

	ENDIF
ENDIF

sortie:

;stop

END