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src/idl/dustemwrap_plot.pro 51.9 KB
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PRO dustemwrap_plot,p_dim,st,dustem_sed,SED_spec,dustem_qsed,Q_spec,dustem_used,U_spec,dustem_polsed,P_spec,dustem_polfrac,SP_spec,dustem_psi_em,PSI_spec,dustem_ext,EXT_spec,dustem_qext,QEXT_spec,dustem_uext,UEXT_spec,dustem_polext,POLEXT_spec,dustem_fpolext,SPEXT_spec,dustem_psi_ext,PSIEXT_spec,_extra=_extra 
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;This is also necessary for the plotting of the results of the fit (Last iteration) 
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IF not keyword_set(st) THEN BEGIN
  ;Activation of the plugins is needed because of the plotting of the total emission model that includes them. 
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  dustem_activate_plugins,p_dim/(*(*!dustem_fit).param_init_values),st  ; 0/0 division case?
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  ;# Emission
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  ;if isa(!dustem_data.sed) then begin ;using !dustem_data instead of !dustem_show because in this release the user is compelled to fit IQU whether in M or X
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  if not keyword_set(dustem_sed) and isa((*!dustem_data).sed) then begin ;better test?
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      dustem_sed = dustem_compute_sed(p_dim,st,SED_spec)
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      if !run_pol && !run_lin then begin
          
          dustem_polsed = dustem_compute_polsed(p_dim,st,P_spec,SP_spec,dustem_polfrac)
          toto = dustem_compute_stokes(p_dim,st,dustem_qsed,dustem_used,Q_spec,U_spec,PSI_spec,dustem_psi_em) 
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          ;stop
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      endif         
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  endif
  
  ;# Extinction
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;   if isa(!dustem_data.ext) then begin
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  if not keyword_set(dustem_ext) and isa((*!dustem_data).ext) then begin
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      dustem_ext = dustem_compute_ext(p_dim,st,EXT_spec)
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      if !run_pol && !run_lin then begin
          
          dustem_polext = dustem_compute_polext(p_dim,st,POLEXT_spec,SPEXT_spec,dustem_fpolext)
          toto = dustem_compute_stokext(p_dim,st,dustem_qext,dustem_uext,QEXT_spec,UEXT_spec,PSIEXT_spec,dustem_psi_ext) 
          
      endif
  endif
  
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ENDIF ELSE BEGIN ;st is provided 
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    ;stop

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    ;# Emission
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    ;if isa(!dustem_data.sed) then begin
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    if not keyword_set(dustem_sed) and isa((*!dustem_data).sed) then begin
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        dustem_sed = dustem_compute_sed(p_dim,st,SED_spec)
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        if !run_pol && !run_lin then begin
            
            dustem_polsed = dustem_compute_polsed(p_dim,st,P_spec,SP_spec,dustem_polfrac)
            toto = dustem_compute_stokes(p_dim,st,dustem_qsed,dustem_used,Q_spec,U_spec,PSI_spec,dustem_psi_em) 
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            ;stop    
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        endif
    endif
    
    ;# Extinction
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    ;if isa(!dustem_data.ext) then begin
    
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    if not keyword_set(dustem_ext) and isa((*!dustem_data).ext) then begin
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        dustem_ext = dustem_compute_ext(p_dim,st,EXT_spec)
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        if !run_pol && !run_lin then begin
            
            dustem_polext = dustem_compute_polext(p_dim,st,POLEXT_spec,SPEXT_spec,dustem_fpolext)
            toto = dustem_compute_stokext(p_dim,st,dustem_qext,dustem_uext,QEXT_spec,UEXT_spec,PSIEXT_spec,dustem_psi_ext) 
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        endif
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    endif
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ENDELSE 
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;LIST OF TESTS THAT NEED TO BE RAN SO THAT THE PLOTTING OF THE MODEL SPECTRA OCCURS

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test_sed = isa((*!dustem_show).sed)
test_ext = isa((*!dustem_show).ext)
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if !run_pol then begin
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    test_polext = isa((*!dustem_show).polext)
    test_polsed = isa((*!dustem_show).polsed)
    test_polfrac = isa((*!dustem_show).polfrac)
    test_fpolext = isa((*!dustem_show).fpolext)
    test_psi_em = isa((*!dustem_show).psi_em)
    test_psi_ext = isa((*!dustem_show).psi_ext)
    test_qsed = isa((*!dustem_show).qsed)
    test_used = isa((*!dustem_show).used)
    test_qext = isa((*!dustem_show).qext)
    test_uext = isa((*!dustem_show).uext)
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    test_m = test_sed or test_polsed or test_polfrac or test_qsed or test_used or test_psi_em
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    test_x = test_ext or test_polext or test_fpolext or test_qext or test_uext or test_psi_ext
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endif else begin
    test_m = test_sed 
    test_x = test_ext 
endelse
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;testing on the fitting of emission vs extinction data
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n_plgns = n_tags(*!dustem_plugin)
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frmt0='(A36)'
frmt1='(1E10.2)'
frmt2='(10F10.2)'

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;I have decided to keep track of the command index manually as I did not find any command online that does this.
cmdind_m = 0 ;for emission
cmdind_x = 0 ;for extinction
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;trying to do the same thing for parameters and plugins
cmdind_prms = 0 ;for parameters
cmdind_plgns = 0 ;for plugins
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;ADDING PLUGIN(S) TO SPECTRUM----------------
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;these following indices will be used to change the keep the same information in the _extra structure
;this is an initial solution until I finish coding the _extra-filtering procedure. 

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iswinsed = !dustemcgwin_id.sed EQ la_undef()
iswinext = !dustemcgwin_id.ext EQ la_undef()

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;trying to do the same thing for parameters and plugins
;But we need to know if the extinction or the emission mode is on.
;so the use of ths pointer will be different than the others
iswinprms = !dustemcgwin_id.prms EQ la_undef()
iswinplgns = !dustemcgwin_id.plgns EQ la_undef()


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;plotstrct = !p
degtorad = !pi/180 ;factor that the arctan will be devided by in order to have an axis in degrees. Talk to JP maybe he wants angle in radians.

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;I think I will test over the presence of the errors because they are not computed at that point.

;errors = ((*!dustem_fit).current_param_errors)
if isa((*!dustem_fit).current_param_errors) then begin
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    errors = (*(*!dustem_fit).current_param_errors) * (*(*!dustem_fit).param_init_values)
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endif else begin
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    errors = (*(*!dustem_fit).param_init_values)*0.;+la_undef();Initialized to 0 instead of la_undef() 
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ENDELSE 

if isa((*!dustem_fit).chi2) then begin
    chi2 = (*!dustem_fit).chi2    
endif else begin
    chi2 = la_undef();maybe not the best initialization 
endelse 

if isa((*!dustem_fit).rchi2) then begin
    rchi2 = (*!dustem_fit).rchi2    
endif else begin
    rchi2 = la_undef();maybe not the best initialization 
endelse 

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if isa(p_dim) then begin
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    if isa((*!dustem_fit).current_param_values) then begin
        
        res  = (*(*!dustem_fit).current_param_values) 
        
    endif else begin  
    
        res = p_dim    
    
    endelse
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endif else begin
    
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   res = (*(*!dustem_fit).param_init_values)*0.;+la_undef()
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endelse
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;stop
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if !run_pol then BEGIN
    wdelta_x=60
    main_wxsize=910
    main_wysize=658

    param_wxpos=main_wxsize+wdelta_x
    param_wypos=15
    param_wxsize=350
    param_wysize=200

    plugin_wxpos=main_wxsize+wdelta_x
    plugin_wypos=300
    plugin_wxsize=350
    plugin_wysize=200
ENDIF ELSE BEGIN
    wdelta_x=60
    main_wxsize=640  ;default of cgwindow
    main_wysize=512  ;default of cgwindow

    param_wxpos=main_wxsize+wdelta_x;700
    param_wypos=15
    param_wxsize=350
    param_wysize=200

    plugin_wxpos=main_wxsize+wdelta_x;700
    plugin_wypos=300
    plugin_wxsize=350
    plugin_wysize=200
ENDELSE

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if test_m then begin
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    ;Generating emission window and saving window ID
    
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    if iswinsed then begin    ;This is when the cgwindow does not exist already
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        if !run_pol then cgwindow,wxsize=main_wxsize,wysize=main_wysize,wtitle='DUSTEMWRAP v2.0 (EMISSION)' else cgwindow,wxsize=main_wxsize,wysize=main_wysize,wtitle='DUSTEMWRAP v2.0 (EMISSION)';, wback='grey';,wobject=winobj_m
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        winid_m = cgquery(dimensions=dim_m,/current) ;this has to be changed because the dimensions of this array change with the data sets present (extinction/emission).
        !dustemcgwin_id.sed = winid_m
        
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        cgcontrol, winid_m, execute=0
        ;cgset, winid_m
        ;Plotting model string (legend)
        xxpos = 0.015
        yypos = 0.97
        ;Plotting Hydrogen column density string (legend)
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        cgtext, xxpos, yypos,'Model : '+!dustem_model,color=0,/normal,charsize = 1.2,/addcmd ;& cmdind_m+=1 This is the first command in the window
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        yypos = 0.95
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        cgtext, xxpos, yypos,textoidl('N_{H}')+textoidl(' (H/cm^2) : ')+strmid(string(*!dustem_HCD,format='(1E10.2)'),2),color=0,/normal,charsize = 1.2,/addcmd & cmdind_m+=1
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        ;Plotting of the number of iterations completed by the fitter
        
        ;Plotting of the number of runs
        ;Getting the width of the unrefreshed string
        widthtot=0.
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        ;cgtext, xxpos, yypos,'Runs : ',color=0,/normal,charsize=-1,width=thiswidth,/addcmd & cmdind_m+=1
        cgtext, xxpos, yypos,'Iteration : ',color=0,/normal,charsize=-1,width=thiswidth,/addcmd & cmdind_m+=1
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        widthtext = thiswidth
        widthtot+= thiswidth ;fixed width
        !dustemcgwin_ncmds.runs.txtwdth = thiswidth
        
        ;Getting the width of the refreshed string
        cgtext, xxpos, yypos,strtrim(!dustem_iter.act,2),color=0,/normal,charsize=-1,width=thiswidth,/addcmd & cmdind_m+=1
        widthtot+= thiswidth;varying width        
        
        ;These two lines will also have to      be modified when plotting the refreshed values
        xxpos = 0.015 ;1.0 - widthtot - 0.03
        yypos = 0.015
        
        ;Displaying fixed part
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        ;cgtext, xxpos, yypos,'Runs : ',color=0,/normal,charsize = 1.35,/addcmd & cmdind_m+=1
        cgtext, xxpos, yypos,'Iteration : ',color=0,/normal,charsize = 1.35,/addcmd & cmdind_m+=1
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        ;Displaying refreshed part (first run . This is the command that will be replaced)
        cgtext, xxpos + widthtext + 0.015 , yypos,strtrim(!dustem_iter.act,2),color=0,/normal,charsize = 1.0,/addcmd & cmdind_m+=1
        ;saving the command id to replace it
        !dustemcgwin_ncmds.runs.pl = cmdind_m

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        ;plotting of (mostly) fixed data for rchi2
        ;Since the format of the strings is specified, the length/width of the string in thex direction is fixed. 
        
        
        ;Getting the width of the unrefreshed string
        widthtot=0.
        cgtext, xxpos, yypos,textoidl('\chi^{2} : '),color=0,/normal,charsize=-1,width=thiswidth,/addcmd & cmdind_m+=1
        widthtext = thiswidth
        widthtot+= thiswidth ;fixed width
        
        ;Getting the width of the refresh.ed string
        cgtext, xxpos, yypos,strtrim(string(chi2,format=frmt2),2),color=0,/normal,charsize=-1,width=thiswidth,/addcmd & cmdind_m+=1
        widthtot+= thiswidth;varying width        
        ;saving the command string width to replace it
        !dustemcgwin_ncmds.chi2.txtwdth = thiswidth
        
        
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        xxpos = 1.0 - widthtot - 0.03
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        yypos = 0.97
        
        ;Displaying fixed part
        cgtext, xxpos, yypos,textoidl('\chi^{2} : '),color=0,/normal,charsize = 1.0,/addcmd & cmdind_m+=1
        ;Displaying refreshed part (first run . This is the command that will be replaced)
        
        cgtext, xxpos + widthtext , yypos,strtrim(string(chi2,format=frmt2),2),color=0,/normal,charsize = 1.0,/addcmd & cmdind_m+=1
       
        ;saving the command id to replace it
        !dustemcgwin_ncmds.chi2.pl = cmdind_m
 
        
        
        ;plotting of (mostly) fixed data for rchi2
        
        ;Getting the width of the unrefreshed string
        widthtot=0.
        cgtext, xxpos, yypos,textoidl('r_{\chi^{2}} : '),color=0,/normal,charsize=-1,width=thiswidth,/addcmd & cmdind_m+=1
        widthtext = thiswidth
        widthtot+= thiswidth ;fixed width
        ;!dustemcgwin_ncmds.rchi2.txtwdth1 = thiswidth
        ;Getting the width of the refreshed string
        cgtext, xxpos, yypos,strtrim(string(rchi2,format=frmt2),2),color=0,/normal,charsize=-1,width=thiswidth,/addcmd & cmdind_m+=1
        widthtot+= thiswidth;varying width        
        !dustemcgwin_ncmds.rchi2.txtwdth = thiswidth
        ;These two lines will also have to      be modified when plotting the refreshed values
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        xxpos = 1.0 - widthtot - 0.03
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        yypos = 0.95
        
        ;Displaying fixed part
        cgtext, xxpos, yypos,textoidl('r_{\chi^{2}} : '),color=0,/normal,charsize = 1.35,/addcmd & cmdind_m+=1
        ;Displaying refreshed part (first run . This is the command that will be replaced)
        cgtext, xxpos + widthtext , yypos,strtrim(string(rchi2,format=frmt2),2),color=0,/normal,charsize = 1.0,/addcmd & cmdind_m+=1
        ;saving the command id to replace it
        !dustemcgwin_ncmds.rchi2.pl = cmdind_m
        
        
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        ;Plotting of the title of the dashboard (plot(s))
        
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        ;NB issue here because the user can't modify the title after the dustem_mpfit_data call at the main procedure level (user proc)
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        ;Getting the width of the title 
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        tit=string(_extra.title);
    
        cgtext, 0.3, 0.95,tit+' (RUNNING)',color=0,/normal,charsize=-1,width=thiswidth,/addcmd & cmdind_m+=1
        widthtot = thiswidth
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        xxpos = (1 - thiswidth)/2
        yypos = 0.96
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        cgtext, 0.3, 0.95,tit,color=0,/normal,charsize=-1,width=thiswidth,/addcmd & cmdind_m+=1 
        !dustemcgwin_ncmds.pltit.txtwdth = thiswidth*1.6 + (1 - widthtot)/2
         
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        cgtext, xxpos, yypos,tit,color=0,/normal,charsize = 1.6,/addcmd & cmdind_m+=1
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        xxpos+=thiswidth*1.6
        cgtext, xxpos, yypos,' (RUNNING)',color=0,/normal,charsize = 1.6,/addcmd & cmdind_m+=1
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        !dustemcgwin_ncmds.pltit.pl = cmdind_m
        
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    endif else begin     ;This is when the cgwindow exists already
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        winid_m = !dustemcgwin_id.sed
        cgcontrol, winid_m, execute=0
        cgset, winid_m ;apparently specifying the window index isn't enough. This might be because of the use of cgcontrol
        
        ;Refreshing chi2 data: 
        cmdin_m = !dustemcgwin_ncmds.chi2.pl
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        xxpos = 1 - !dustemcgwin_ncmds.chi2.txtwdth - 0.03  
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        yypos = 0.97
        cgwindow,'cgtext', xxpos , yypos,strtrim(string(chi2,format=frmt2),2),color=0,/normal,charsize = 1.0,/replacecmd,cmdindex=cmdin_m, winid=winid_m ;& cmdind_m+=1
        
        
        
        ;Refreshing rchi2 data: 
        cmdin_m = !dustemcgwin_ncmds.rchi2.pl
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        xxpos = 1 - !dustemcgwin_ncmds.rchi2.txtwdth - 0.03  
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        yypos = 0.95
        cgwindow,'cgtext', xxpos , yypos,strtrim(string(rchi2,format=frmt2),2),color=0,/normal,charsize = 1.0,/replacecmd,cmdindex=cmdin_m, winid=winid_m ;& cmdind_m+=1
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        ;Refreshing number of runs data: 
        cmdin_m = !dustemcgwin_ncmds.runs.pl
        xxpos = 0.03 + !dustemcgwin_ncmds.runs.txtwdth*1.35  ;(because of charsize)
        yypos = 0.015
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        if !dustem_iter.act eq 0 then txt = 'Fit failed. '  else txt = strtrim(!dustem_iter.act,2)
        cgwindow,'cgtext', xxpos , yypos,txt,color=0,/normal,charsize = 1.0,/replacecmd,cmdindex=cmdin_m, winid=winid_m ;& cmdind_m+=1
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        ;update of the title here ?
        
        if isa((*!dustem_fit).current_param_values) then begin
            ;replacing my count - 3
            tit=string(_extra.title)
            cmdin_m = !dustemcgwin_ncmds.pltit.pl
            
            xxpos = !dustemcgwin_ncmds.pltit.txtwdth
            yypos = 0.96
        
            cgwindow,'cgtext', xxpos , yypos,' (Final Run)',color=0,/normal,charsize = 1.6,/replacecmd,cmdindex=cmdin_m, winid=winid_m  
        
        endif
    
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    endelse
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    ;cgWindow_GetDefs,xsize=xsize,ysize=ysize
    ;cgcontrol, resize=[xsize,ysize]
    if !run_pol then begin
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        ;,wback='grey'
2910e8ce   Ilyes Choubani   Draft version of ...
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        ;position arrays for plot and normalized graph
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        ;THIS IS HARD-CODED IN A VERY SILLY WAY
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        p_sed = [0.05,0.67,0.475,0.90]
        p_psed = [0.525,0.67,0.95,0.90]
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        p_spsed = [0.05,0.375,0.475,0.575]
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        p_psised = [0.525,0.375,0.95,0.575]
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        p_qsed = [0.05,0.12,0.475,0.35]  
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        p_used = [0.525,0.12,0.95,0.35]
        
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        np_sed = [0.05,0.60,0.475,0.67]
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        np_psed = [0.525,0.60,0.95,0.67]
        np_qsed = [0.05,0.05,0.475,0.12] 
        np_used = [0.525,0.05,0.95,0.12]
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        p_sed[1]+= 0.0125 & p_sed[3]+= 0.0125 
        p_psed[1]+= 0.0125 & p_psed[3]+= 0.0125
        p_spsed[1]+= 0.0125 & p_spsed[3]+= 0.0125
        p_psised[1]+= 0.0125 & p_psised[3]+= 0.0125
        p_qsed[1]+= 0.0125 & p_qsed[3]+= 0.0125
        p_used[1]+= 0.0125 & p_used[3]+= 0.0125
        
        np_sed[1]+= 0.0125 & np_sed[3]+= 0.0125 
        np_psed[1]+= 0.0125 & np_psed[3]+= 0.0125
        np_qsed[1]+= 0.0125 & np_qsed[3]+= 0.0125
        np_used[1]+= 0.0125 & np_used[3]+= 0.0125
        
        
          
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    endif else begin
        p_sed  = [0.07,0.30,0.97,0.85]
        np_sed = [0.07,0.10,0.97,0.30]
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2910e8ce   Ilyes Choubani   Draft version of ...
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    endelse

    ;Plotting of sed data axes (whether or not data is present)
    plotsym,0,/fill ;you might need to execute this again. hmm...
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bc224f3e   Ilyes Choubani   Update of plottin...
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    ;This is not the right test the user might want to show the prediction for sed and fit the stokes parameters
2910e8ce   Ilyes Choubani   Draft version of ...
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    if ~test_sed then begin ; SED data is not present (For completeness) # This is only valid when !run_pol=1
        
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        cgwindow,'dustemcgwin_dataset', st, dataset='SED', /nodata, position=p_sed, /addcmd, winid=winid_m, _extra=_extra & cmdind_m+=1
        cgwindow,'dustemcgwin_dataset', st, dataset='SED', /nodata, /norm, position=np_sed, /addcmd, winid=winid_m, _extra=_extra & cmdind_m+=1
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    endif else begin ;SED exists
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       if  ~iswinsed then begin
5f04fa07   Ilyes Choubani   general update
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            cmdind_m = !dustemcgwin_ncmds.sed.pl
            cgwindow,'dustemcgwin_dataset', st, dustem_sed,SED_spec,dataset='SED', /refresh ,position=p_sed, winid=winid_m,cmdindex=cmdind_m,/replacecmd,_extra=_extra     
            
            cmdind_m = !dustemcgwin_ncmds.sed.nrm
            cgwindow,'dustemcgwin_dataset', st, dustem_sed,SED_spec,dataset='SED', /norm, /refresh,position=np_sed, winid=winid_m,cmdindex=cmdind_m,/replacecmd,_extra=_extra
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       endif else begin
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           cgwindow,'dustemcgwin_dataset', st, dataset='SED', position=p_sed, /addcmd, winid=winid_m, _extra=_extra & cmdind_m+=1 
96a72c8b   Ilyes Choubani   seperating xrange...
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           cgwindow,'dustemcgwin_dataset', st, dustem_sed,SED_spec, dataset='SED', /refresh ,position=p_sed, /addcmd, winid=winid_m, _extra=_extra & cmdind_m+=1
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           !dustemcgwin_ncmds.sed.pl = cmdind_m
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           cgwindow,'dustemcgwin_dataset', st, dataset='SED',/norm, position=np_sed, /addcmd, winid=winid_m, _extra=_extra & cmdind_m+=1 ;I think nodata can also be used too
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           cgwindow,'dustemcgwin_dataset', st, dustem_sed,SED_spec, dataset='SED', /norm, /refresh,position=np_sed, /addcmd ,winid=winid_m, _extra=_extra & cmdind_m+=1
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           !dustemcgwin_ncmds.sed.nrm = cmdind_m
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       endelse       
    endelse
    
    ;if ~!run_pol then begin;I don't think the order of the  ;goto, end_m
      if !run_pol then begin ;then goto, end_m
2910e8ce   Ilyes Choubani   Draft version of ...
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        if ~test_qsed then begin ;Qsed is not present
            
            cgwindow,'dustemcgwin_dataset', st, dataset='QSED', /nodata, position=p_qsed, /addcmd, winid=winid_m, _extra=_extra & cmdind_m+=1
5f04fa07   Ilyes Choubani   general update
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            cgwindow,'dustemcgwin_dataset', st, dataset='QSED', /nodata, /norm, position=np_qsed, /addcmd, winid=winid_m, _extra=_extra & cmdind_m+=1
c8368c6e   Ilyes Choubani   updating plotting...
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        endif else begin ;Qsed data is present
               
            if  ~iswinsed then begin
96a72c8b   Ilyes Choubani   seperating xrange...
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                cmdind_m = !dustemcgwin_ncmds.qsed.pl
                ;refreshing the positive_only and negative_only plots if data is present in them
07372e26   Ilyes Choubani   Corrected huge pl...
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                cgwindow,'dustemcgwin_dataset', st, dustem_qsed,Q_spec,dataset='QSED',/positive_only, nodata=0, /refresh ,position=p_qsed, winid=winid_m,/replacecmd,cmdindex=cmdind_m, _extra=_extra
5f04fa07   Ilyes Choubani   general update
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07372e26   Ilyes Choubani   Corrected huge pl...
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                cgwindow,'dustemcgwin_dataset', st, dustem_qsed,Q_spec, dataset='QSED',/negative_only, nodata=0, /refresh ,position=p_qsed, winid=winid_m,/replacecmd,cmdindex=cmdind_m+2, _extra=_extra
5f04fa07   Ilyes Choubani   general update
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18e4331f   Ilyes Choubani   general update (f...
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                cmdind_m = !dustemcgwin_ncmds.qsed.nrm
07372e26   Ilyes Choubani   Corrected huge pl...
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                cgwindow,'dustemcgwin_dataset', st, dustem_qsed,Q_spec, dataset='QSED', /refresh, nodata=0, /norm,position=np_qsed, winid=winid_m,/replacecmd,cmdindex=cmdind_m, _extra=_extra
5f04fa07   Ilyes Choubani   general update
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18e4331f   Ilyes Choubani   general update (f...
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            endif else begin
5f04fa07   Ilyes Choubani   general update
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dfc68a85   Ilyes Choubani   Fixed some plotti...
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                ;Plotting of postive values if they exist (if hidden data is present it is plotted if not an empty plot is rendered)
18e4331f   Ilyes Choubani   general update (f...
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                cgwindow,'dustemcgwin_dataset', st, dataset='QSED', position=p_qsed, /addcmd, winid=winid_m,/positive_only, _extra=_extra & cmdind_m+=1
                ;Refreshing the positive_only plot ONLY if there is data. If not do nothing
07372e26   Ilyes Choubani   Corrected huge pl...
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                cgwindow,'dustemcgwin_dataset', st, dustem_qsed,Q_spec, dataset='QSED',/positive_only, /refresh ,position=p_qsed, /addcmd, winid=winid_m, _extra=_extra & cmdind_m+=1
                
                !dustemcgwin_ncmds.qsed.pl = cmdind_m
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                cgwindow,'dustemcgwin_dataset', st, dataset='QSED', position=p_qsed, /addcmd, winid=winid_m,/negative_only, _extra=_extra & cmdind_m+=1
                ;Refreshing the negative_only plot ONLY if there is data. If not do nothing
07372e26   Ilyes Choubani   Corrected huge pl...
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                cgwindow,'dustemcgwin_dataset', st, dustem_qsed,Q_spec,dataset='QSED',/negative_only, /refresh ,position=p_qsed, /addcmd, winid=winid_m, _extra=_extra & cmdind_m+=1
18e4331f   Ilyes Choubani   general update (f...
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5f04fa07   Ilyes Choubani   general update
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18e4331f   Ilyes Choubani   general update (f...
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                cgwindow,'dustemcgwin_dataset', st, dataset='QSED',/norm, position=np_qsed, /addcmd, winid=winid_m, _extra=_extra & cmdind_m+=1 ;I think nodata can also be uqsed too
07372e26   Ilyes Choubani   Corrected huge pl...
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                cgwindow,'dustemcgwin_dataset', st, dustem_qsed,Q_spec,dataset='QSED', /norm, /refresh,position=np_qsed, /addcmd, winid=winid_m, _extra=_extra & cmdind_m+=1
18e4331f   Ilyes Choubani   general update (f...
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                !dustemcgwin_ncmds.qsed.nrm = cmdind_m
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18e4331f   Ilyes Choubani   general update (f...
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        endelse       
      endelse
5f04fa07   Ilyes Choubani   general update
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         ;stop        
18e4331f   Ilyes Choubani   general update (f...
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        if ~test_used then begin ;used is not present
            
            cgwindow,'dustemcgwin_dataset', st, dataset='USED', /nodata, position=p_used, /addcmd, winid=winid_m, _extra=_extra & cmdind_m+=1
5f04fa07   Ilyes Choubani   general update
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            cgwindow,'dustemcgwin_dataset', st, dataset='USED', /nodata, /norm, position=np_used, /addcmd, winid=winid_m, _extra=_extra & cmdind_m+=1
c8368c6e   Ilyes Choubani   updating plotting...
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18e4331f   Ilyes Choubani   general update (f...
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        endif else begin ;used data is present
               
            if  ~iswinsed then begin
                cmdind_m = !dustemcgwin_ncmds.used.pl
                ;refreshing the positive_only and negative_only plots if data is present in them
07372e26   Ilyes Choubani   Corrected huge pl...
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                cgwindow,'dustemcgwin_dataset', st, dustem_used,U_spec, dataset='USED',/positive_only, /refresh, nodata=0 ,position=p_used, winid=winid_m,/replacecmd,cmdindex=cmdind_m, _extra=_extra
5f04fa07   Ilyes Choubani   general update
496
                
07372e26   Ilyes Choubani   Corrected huge pl...
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                cgwindow,'dustemcgwin_dataset', st, dustem_used,U_spec, dataset='USED',/negative_only, /refresh, nodata=0 ,position=p_used, winid=winid_m,/replacecmd,cmdindex=cmdind_m+2, _extra=_extra
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18e4331f   Ilyes Choubani   general update (f...
499
                cmdind_m = !dustemcgwin_ncmds.used.nrm
07372e26   Ilyes Choubani   Corrected huge pl...
500
                cgwindow,'dustemcgwin_dataset', st, dustem_used,U_spec, dataset='USED', /refresh, nodata=0, /norm,position=np_used, winid=winid_m,/replacecmd,cmdindex=cmdind_m, _extra=_extra
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18e4331f   Ilyes Choubani   general update (f...
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            endif else begin
            ;stop
                ;Plotting of postive values if they exist (if hidden data is present it is plotted if not an empty plot is rendred)
                cgwindow,'dustemcgwin_dataset', st, dataset='USED', position=p_used, /addcmd, winid=winid_m,/positive_only, _extra=_extra & cmdind_m+=1
                ;Refreshing the positive_only plot ONLY if there is data. If not do nothing
07372e26   Ilyes Choubani   Corrected huge pl...
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                cgwindow,'dustemcgwin_dataset', st, dustem_used,U_spec, dataset='USED',/positive_only, /refresh ,position=p_used, /addcmd, winid=winid_m, _extra=_extra & cmdind_m+=1
                
                !dustemcgwin_ncmds.used.pl = cmdind_m
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                cgwindow,'dustemcgwin_dataset', st, dataset='USED', position=p_used, /addcmd, winid=winid_m,/negative_only, _extra=_extra & cmdind_m+=1
                ;Refreshing the negative_only plot ONLY if there is data. If not do nothing
07372e26   Ilyes Choubani   Corrected huge pl...
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                cgwindow,'dustemcgwin_dataset', st, dustem_used,U_spec, dataset='USED',/negative_only, /refresh ,position=p_used, /addcmd, winid=winid_m, _extra=_extra & cmdind_m+=1
                
18e4331f   Ilyes Choubani   general update (f...
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18e4331f   Ilyes Choubani   general update (f...
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                cgwindow,'dustemcgwin_dataset', st, dataset='USED',/norm, position=np_used, /addcmd, winid=winid_m, _extra=_extra & cmdind_m+=1 ;I think nodata can also be uused too
07372e26   Ilyes Choubani   Corrected huge pl...
518
                cgwindow,'dustemcgwin_dataset', st, dustem_used,U_spec, dataset='USED', /norm, /refresh,position=np_used, /addcmd, winid=winid_m, _extra=_extra & cmdind_m+=1
18e4331f   Ilyes Choubani   general update (f...
519
                !dustemcgwin_ncmds.used.nrm = cmdind_m
5f04fa07   Ilyes Choubani   general update
520
                
18e4331f   Ilyes Choubani   general update (f...
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        endelse       
      endelse
      
      if ~test_psi_em then begin ; psi_em data is not present (For completeness) # This is only valid when !run_pol=1
          
          cgwindow,'dustemcgwin_dataset', st, dataset='psi_em', /nodata, position=p_psised, /addcmd, winid=winid_m, _extra=_extra  & cmdind_m+=1
18e4331f   Ilyes Choubani   general update (f...
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      endif else begin ;psi_em exists
5cb00808   Jean-Philippe Bernard   added some commen...
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         ;stop
18e4331f   Ilyes Choubani   general update (f...
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         if  ~iswinsed then begin
             cmdind_m = !dustemcgwin_ncmds.psi_em.pl
07372e26   Ilyes Choubani   Corrected huge pl...
532
             cgwindow,'dustemcgwin_dataset', st, dustem_psi_em,PSI_spec, dataset='psi_em', /refresh ,position=p_psised, winid=winid_m,/replacecmd,cmdindex=cmdind_m, _extra=_extra
af5bca1f   Ilyes Choubani   general update
533
             
18e4331f   Ilyes Choubani   general update (f...
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         endif else begin
         ;stop
             cgwindow,'dustemcgwin_dataset', st, dataset='psi_em', position=p_psised, /addcmd, winid=winid_m, _extra=_extra & cmdind_m+=1
07372e26   Ilyes Choubani   Corrected huge pl...
537
             cgwindow,'dustemcgwin_dataset', st, dustem_psi_em,PSI_spec, dataset='psi_em', /refresh ,position=p_psised, /addcmd, winid=winid_m, _extra=_extra & cmdind_m+=1
18e4331f   Ilyes Choubani   general update (f...
538
             !dustemcgwin_ncmds.psi_em.pl = cmdind_m
af5bca1f   Ilyes Choubani   general update
539

18e4331f   Ilyes Choubani   general update (f...
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         endelse       
      endelse
c8368c6e   Ilyes Choubani   updating plotting...
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18e4331f   Ilyes Choubani   general update (f...
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      if ~test_polsed then begin ; polsed data is not present (For completeness) # This is only valid when !run_pol=1
          
          cgwindow,'dustemcgwin_dataset', st, dataset='polsed', /nodata, position=p_psed, /addcmd, winid=winid_m, _extra=_extra & cmdind_m+=1
5f04fa07   Ilyes Choubani   general update
547
          cgwindow,'dustemcgwin_dataset', st, dataset='polsed', /nodata, /norm, position=np_psed, /addcmd, winid=winid_m, _extra=_extra & cmdind_m+=1
18e4331f   Ilyes Choubani   general update (f...
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      endif else begin ;polsed exists

         if  ~iswinsed then begin
             cmdind_m = !dustemcgwin_ncmds.polsed.pl
5f04fa07   Ilyes Choubani   general update
553
             cgwindow,'dustemcgwin_dataset', st, dustem_polsed,P_spec, dataset='polsed', /refresh ,position=p_psed, winid=winid_m,/replacecmd,cmdindex=cmdind_m, _extra=_extra
18e4331f   Ilyes Choubani   general update (f...
554
             cmdind_m = !dustemcgwin_ncmds.polsed.nrm
5f04fa07   Ilyes Choubani   general update
555
             cgwindow,'dustemcgwin_dataset', st, dustem_polsed,P_spec, dataset='polsed', /norm, /refresh,position=np_psed, winid=winid_m,/replacecmd,cmdindex=cmdind_m, _extra=_extra
18e4331f   Ilyes Choubani   general update (f...
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         endif else begin
         ;stop
             cgwindow,'dustemcgwin_dataset', st, dataset='polsed', position=p_psed, /addcmd, winid=winid_m, _extra=_extra  & cmdind_m+=1  
5f04fa07   Ilyes Choubani   general update
559
             cgwindow,'dustemcgwin_dataset', st, dustem_polsed,P_spec, dataset='polsed', /refresh ,position=p_psed, /addcmd, winid=winid_m, _extra=_extra & cmdind_m+=1
18e4331f   Ilyes Choubani   general update (f...
560
561
             !dustemcgwin_ncmds.polsed.pl = cmdind_m
             cgwindow,'dustemcgwin_dataset', st, dataset='polsed',/norm, position=np_psed, /addcmd, winid=winid_m, _extra=_extra & cmdind_m+=1 ;I think nodata can also be upolsed too
5f04fa07   Ilyes Choubani   general update
562
             cgwindow,'dustemcgwin_dataset', st, dustem_polsed,P_spec, dataset='polsed', /norm, /refresh,position=np_psed, /addcmd, winid=winid_m, _extra=_extra & cmdind_m+=1
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563
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             !dustemcgwin_ncmds.polsed.nrm = cmdind_m
         endelse       
      endelse      
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      if ~test_polfrac then begin ; polfrac data is not present (For completeness) # This is only valid when !run_pol=1
          
          cgwindow,'dustemcgwin_dataset', st, dataset='polfrac', /nodata, position=p_spsed, /addcmd, winid=winid_m, _extra=_extra  & cmdind_m+=1
18e4331f   Ilyes Choubani   general update (f...
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572
      endif else begin ;polfrac exists
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         if  ~iswinsed then begin
             cmdind_m = !dustemcgwin_ncmds.polfrac.pl
5f04fa07   Ilyes Choubani   general update
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             cgwindow,'dustemcgwin_dataset', st, dustem_polfrac,SP_spec,SED_spec, dataset='polfrac', /refresh ,position=p_spsed, winid=winid_m,/replacecmd,cmdindex=cmdind_m, _extra=_extra
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         endif else begin
         ;stop
             cgwindow,'dustemcgwin_dataset', st, dataset='polfrac', position=p_spsed, /addcmd, winid=winid_m, _extra=_extra & cmdind_m+=1
5f04fa07   Ilyes Choubani   general update
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             cgwindow,'dustemcgwin_dataset', st, dustem_polfrac,SP_spec,SED_spec, dataset='polfrac', /refresh ,position=p_spsed, /addcmd, winid=winid_m, _extra=_extra & cmdind_m+=1
af5bca1f   Ilyes Choubani   general update
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             !dustemcgwin_ncmds.polfrac.pl = cmdind_m
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         endelse       
      endelse  
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588
    ENDIF
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590
    cgcontrol, winid_m, execute=1
2910e8ce   Ilyes Choubani   Draft version of ...
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ENDIF 


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596
;stop
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if test_x then begin
    ;Generating extinction window and saving window ID
    
    if iswinext then begin
        
dba085c0   Jean-Philippe Bernard   fixed windows pos...
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        if !run_pol then cgwindow,wxsize=main_wxsize,wysize=main_wysize,wtitle='DUSTEMWRAP v2.0 (EXTINCTION)' else cgwindow,wxsize=main_wxsize,wysize=main_wysize,wtitle='DUSTEMWRAP v2.0 (EXTINCTION)';, wback='grey';,wobject=winobj_m
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        winid_x = cgquery(dimensions=dim_x,/current) ;this has to be changed because the dimensions of this array change with the data sets present (extinction/emission).
        !dustemcgwin_id.ext = winid_x
        
        cgcontrol, winid_x, execute=0
        ;cgset, winid_m
        ;Plotting model string (legend)
        xxpos = 0.015
        yypos = 0.97
        ;Plotting Hydrogen column density string (legend)
        cgtext, xxpos, yypos,'Model : '+!dustem_model,color=0,/normal,charsize = 1.2,/addcmd ;& cmdind_m+=1 This is the first command in the window
        yypos = 0.95
        cgtext, xxpos, yypos,textoidl('N_{H}')+textoidl(' (H/cm^2) : ')+strmid(string(*!dustem_HCD,format='(1E10.2)'),2),color=0,/normal,charsize = 1.2,/addcmd & cmdind_x+=1
        
        ;Plotting of the number of iterations completed by the fitter
        
        ;Plotting of the number of runs
        ;Getting the width of the unrefreshed string
        widthtot=0.
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        ;cgtext, xxpos, yypos,'Runs : ',color=0,/normal,charsize=-1,width=thiswidth,/addcmd & cmdind_x+=1
        cgtext, xxpos, yypos,'Iteration : ',color=0,/normal,charsize=-1,width=thiswidth,/addcmd & cmdind_x+=1
67bd858a   Ilyes Choubani   Replication of th...
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        widthtext = thiswidth
        widthtot+= thiswidth ;fixed width
        !dustemcgwin_ncmds.runs.txtwdth = thiswidth
        
        ;Getting the width of the refreshed string
        cgtext, xxpos, yypos,strtrim(!dustem_iter.act,2),color=0,/normal,charsize=-1,width=thiswidth,/addcmd & cmdind_x+=1
        widthtot+= thiswidth;varying width        
        
        ;These two lines will also have to      be modified when plotting the refreshed values
        xxpos = 0.015 ;1.0 - widthtot - 0.03
        yypos = 0.015
        
        ;Displaying fixed part
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        ;cgtext, xxpos, yypos,'Runs : ',color=0,/normal,charsize = 1.35,/addcmd & cmdind_x+=1
        cgtext, xxpos, yypos,'Iteration : ',color=0,/normal,charsize = 1.35,/addcmd & cmdind_x+=1
67bd858a   Ilyes Choubani   Replication of th...
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        ;Displaying refreshed part (first run . This is the command that will be replaced)
        cgtext, xxpos + widthtext + 0.015 , yypos,strtrim(!dustem_iter.act,2),color=0,/normal,charsize = 1.0,/addcmd & cmdind_x+=1
        ;saving the command id to replace it
        !dustemcgwin_ncmds.runs.pl = cmdind_x

        ;plotting of (mostly) fixed data for rchi2
        ;Since the format of the strings is specified, the length/width of the string in thex direction is fixed. 
        
        
        ;Getting the width of the unrefreshed string
        widthtot=0.
        cgtext, xxpos, yypos,textoidl('\chi^{2} : '),color=0,/normal,charsize=-1,width=thiswidth,/addcmd & cmdind_x+=1
        widthtext = thiswidth
        widthtot+= thiswidth ;fixed width
        
        ;Getting the width of the refresh.ed string
        cgtext, xxpos, yypos,strtrim(string(chi2,format=frmt2),2),color=0,/normal,charsize=-1,width=thiswidth,/addcmd & cmdind_x+=1
        widthtot+= thiswidth;varying width        
        ;saving the command string width to replace it
        !dustemcgwin_ncmds.chi2.txtwdth = thiswidth
        
        
        xxpos = 1.0 - widthtot - 0.03
        
        yypos = 0.97
        
        ;Displaying fixed part
        cgtext, xxpos, yypos,textoidl('\chi^{2} : '),color=0,/normal,charsize = 1.0,/addcmd & cmdind_x+=1
        ;Displaying refreshed part (first run . This is the command that will be replaced)
        
        cgtext, xxpos + widthtext , yypos,strtrim(string(chi2,format=frmt2),2),color=0,/normal,charsize = 1.0,/addcmd & cmdind_x+=1
        
        ;saving the command id to replace it
        !dustemcgwin_ncmds.chi2.pl = cmdind_x
  
        
        
        ;plotting of (mostly) fixed data for rchi2
        
        ;Getting the width of the unrefreshed string
        widthtot=0.
        cgtext, xxpos, yypos,textoidl('r_{\chi^{2}} : '),color=0,/normal,charsize=-1,width=thiswidth,/addcmd & cmdind_x+=1
        widthtext = thiswidth
        widthtot+= thiswidth ;fixed width
        ;!dustemcgwin_ncmds.rchi2.txtwdth1 = thiswidth
        ;Getting the width of the refreshed string
        cgtext, xxpos, yypos,strtrim(string(rchi2,format=frmt2),2),color=0,/normal,charsize=-1,width=thiswidth,/addcmd & cmdind_x+=1
        widthtot+= thiswidth;varying width        
        !dustemcgwin_ncmds.rchi2.txtwdth = thiswidth
        ;These two lines will also have to      be modified when plotting the refreshed values
        xxpos = 1.0 - widthtot - 0.03
        yypos = 0.95
        
        ;Displaying fixed part
        cgtext, xxpos, yypos,textoidl('r_{\chi^{2}} : '),color=0,/normal,charsize = 1.35,/addcmd & cmdind_x+=1
        ;Displaying refreshed part (first run . This is the command that will be replaced)
        cgtext, xxpos + widthtext , yypos,strtrim(string(rchi2,format=frmt2),2),color=0,/normal,charsize = 1.0,/addcmd & cmdind_x+=1
        ;saving the command id to replace it
        !dustemcgwin_ncmds.rchi2.pl = cmdind_x
        
        
        ;Plotting of the title of the dashboard (plot(s))
        
        ;NB: JP is right, the user should be able to set the entirety of the title.
        ;Make this block aware of the saving of the data  (from the fits table)
        
        
        ;Getting the width of the title 
        tit=string(_extra.title);
    
        cgtext, 0.3, 0.95,tit+' (RUNNING)',color=0,/normal,charsize=-1,width=thiswidth,/addcmd & cmdind_x+=1
        widthtot = thiswidth
        xxpos = (1 - thiswidth)/2
        yypos = 0.96
        
        cgtext, 0.3, 0.95,tit,color=0,/normal,charsize=-1,width=thiswidth,/addcmd & cmdind_x+=1 
        !dustemcgwin_ncmds.pltit.txtwdth = thiswidth*1.6 + (1 - widthtot)/2
          
        cgtext, xxpos, yypos,tit,color=0,/normal,charsize = 1.6,/addcmd & cmdind_x+=1
        xxpos+=thiswidth*1.6
        cgtext, xxpos, yypos,' (RUNNING)',color=0,/normal,charsize = 1.6,/addcmd & cmdind_x+=1
        
        !dustemcgwin_ncmds.pltit.pl = cmdind_x
        
    endif else begin 
    
        
        winid_x = !dustemcgwin_id.ext
        cgcontrol, winid_x, execute=0
        cgset, winid_x ;apparently specifying the window index isn't enough. This might be because of the use of cgcontrol
        
        ;Refreshing chi2 data: 
afde94a3   Ilyes Choubani   general update
730
        cmdind_x = !dustemcgwin_ncmds.chi2.pl
67bd858a   Ilyes Choubani   Replication of th...
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        xxpos = 1 - !dustemcgwin_ncmds.chi2.txtwdth - 0.03  
        yypos = 0.97
afde94a3   Ilyes Choubani   general update
733
        cgwindow,'cgtext', xxpos , yypos,strtrim(string(chi2,format=frmt2),2),color=0,/normal,charsize = 1.0,/replacecmd,cmdindex=cmdind_x, winid=winid_x ;& cmdind_m+=1
67bd858a   Ilyes Choubani   Replication of th...
734
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        ;Refreshing rchi2 data: 
afde94a3   Ilyes Choubani   general update
738
        cmdind_x = !dustemcgwin_ncmds.rchi2.pl
67bd858a   Ilyes Choubani   Replication of th...
739
740
        xxpos = 1 - !dustemcgwin_ncmds.rchi2.txtwdth - 0.03  
        yypos = 0.95
afde94a3   Ilyes Choubani   general update
741
        cgwindow,'cgtext', xxpos , yypos,strtrim(string(rchi2,format=frmt2),2),color=0,/normal,charsize = 1.0,/replacecmd,cmdindex=cmdind_x, winid=winid_x ;& cmdind_m+=1
67bd858a   Ilyes Choubani   Replication of th...
742
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        ;Refreshing number of runs data: 
afde94a3   Ilyes Choubani   general update
745
        cmdind_x = !dustemcgwin_ncmds.runs.pl
67bd858a   Ilyes Choubani   Replication of th...
746
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        xxpos = 0.03 + !dustemcgwin_ncmds.runs.txtwdth*1.35  ;(because of charsize)
        yypos = 0.015
afde94a3   Ilyes Choubani   general update
748
        cgwindow,'cgtext', xxpos , yypos,strtrim(!dustem_iter.act,2),color=0,/normal,charsize = 1.0,/replacecmd,cmdindex=cmdind_x, winid=winid_x ;& cmdind_m+=1
67bd858a   Ilyes Choubani   Replication of th...
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        ;update of the title here ?
        ;NB: JP is right, the user should be able to set the entirety of the title.
        ;Make this block aware of the saving of the data  (from the fits table)
        
        if isa((*!dustem_fit).current_param_values) then begin
            ;replacing my count - 3
            tit=string(_extra.title)
afde94a3   Ilyes Choubani   general update
758
            cmdind_x = !dustemcgwin_ncmds.pltit.pl
67bd858a   Ilyes Choubani   Replication of th...
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            xxpos = !dustemcgwin_ncmds.pltit.txtwdth
            yypos = 0.96
        
afde94a3   Ilyes Choubani   general update
763
            cgwindow,'cgtext', xxpos , yypos,' (Final Run)',color=0,/normal,charsize = 1.6,/replacecmd,cmdindex=cmdind_x, winid=winid_x  
67bd858a   Ilyes Choubani   Replication of th...
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        endif
    
    endelse
    
    ;cgWindow_GetDefs,xsize=xsize,ysize=ysize
    ;cgcontrol, resize=[xsize,ysize]
    if !run_pol then begin
        ;,wback='grey'
        
        ;position arrays for plot and normalized graph
        
        ;THIS IS HARD-CODED IN A VERY SILLY WAY
        
        p_ext = [0.05,0.67,0.475,0.90]
        p_pext = [0.525,0.67,0.95,0.90]
        p_spext = [0.05,0.375,0.475,0.575] ; Should we plot this? tau_polext/tau_ext_tot. YES FOR NOW...
        p_psiext = [0.525,0.375,0.95,0.575]
        p_qext = [0.05,0.12,0.475,0.35]  
        p_uext = [0.525,0.12,0.95,0.35]
        
        np_ext = [0.05,0.60,0.475,0.67]
        np_pext = [0.525,0.60,0.95,0.67]
        np_qext = [0.05,0.05,0.475,0.12] 
        np_uext = [0.525,0.05,0.95,0.12]
        
        p_ext[1]+= 0.0125 & p_ext[3]+= 0.0125 
        p_pext[1]+= 0.0125 & p_pext[3]+= 0.0125
        p_spext[1]+= 0.0125 & p_spext[3]+= 0.0125
        p_psiext[1]+= 0.0125 & p_psiext[3]+= 0.0125
        p_qext[1]+= 0.0125 & p_qext[3]+= 0.0125
        p_uext[1]+= 0.0125 & p_uext[3]+= 0.0125
        
        np_ext[1]+= 0.0125 & np_ext[3]+= 0.0125 
        np_pext[1]+= 0.0125 & np_pext[3]+= 0.0125
        np_qext[1]+= 0.0125 & np_qext[3]+= 0.0125
        np_uext[1]+= 0.0125 & np_uext[3]+= 0.0125
        
        
          
    endif else begin
        p_ext  = [0.07,0.30,0.97,0.85]
        np_ext = [0.07,0.10,0.97,0.30]
    
    endelse

    ;Plotting of sed data axes (whether or not data is present)
    plotsym,0,/fill ;you might need to execute this again. hmm...


    ;This is not the right test the user might want to show the prediction for sed and fit the stokes parameters
    if ~test_ext then begin ; EXT data is not present (For completeness) # This is only valid when !run_pol=1
        
        cgwindow,'dustemcgwin_dataset', st, dataset='EXT', /nodata, position=p_ext, /addcmd, winid=winid_x, _extra=_extra & cmdind_x+=1
        cgwindow,'dustemcgwin_dataset', st, dataset='EXT', /nodata, /norm, position=np_ext, /addcmd, winid=winid_x, _extra=_extra & cmdind_x+=1

    endif else begin ;EXT exists

        if  ~iswinext then begin
        
afde94a3   Ilyes Choubani   general update
824
            cmdind_x = !dustemcgwin_ncmds.ext.pl
67bd858a   Ilyes Choubani   Replication of th...
825
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            cgwindow,'dustemcgwin_dataset', st, dustem_ext,EXT_spec,dataset='EXT', /refresh ,position=p_ext, winid=winid_x,cmdindex=cmdind_x,/replacecmd,_extra=_extra     
            
afde94a3   Ilyes Choubani   general update
827
            cmdind_x = !dustemcgwin_ncmds.ext.nrm
67bd858a   Ilyes Choubani   Replication of th...
828
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            cgwindow,'dustemcgwin_dataset', st, dustem_ext,EXT_spec,dataset='EXT', /norm, /refresh,position=np_ext, winid=winid_x,cmdindex=cmdind_x,/replacecmd,_extra=_extra
            
            
        endif else begin
      
            cgwindow,'dustemcgwin_dataset', st, dataset='EXT', position=p_ext, /addcmd, winid=winid_x, _extra=_extra & cmdind_x+=1 
            cgwindow,'dustemcgwin_dataset', st, dustem_ext,EXT_spec, dataset='EXT', /refresh ,position=p_ext, /addcmd, winid=winid_x, _extra=_extra & cmdind_x+=1
            !dustemcgwin_ncmds.ext.pl = cmdind_x
            
            cgwindow,'dustemcgwin_dataset', st, dataset='EXT',/norm, position=np_ext, /addcmd, winid=winid_x, _extra=_extra & cmdind_x+=1 ;I think nodata can also be used too
            
            cgwindow,'dustemcgwin_dataset', st, dustem_ext,EXT_spec, dataset='EXT', /norm, /refresh,position=np_ext, /addcmd ,winid=winid_x, _extra=_extra & cmdind_x+=1
            !dustemcgwin_ncmds.ext.nrm = cmdind_x
              
        endelse       
    endelse
    
d4f8829f   Ilyes Choubani   small cleaning
845
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      if !run_pol then begin 
67bd858a   Ilyes Choubani   Replication of th...
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        if ~test_qext then begin ;Qext is not present
            
            cgwindow,'dustemcgwin_dataset', st, dataset='QEXT', /nodata, position=p_qext, /addcmd, winid=winid_x, _extra=_extra & cmdind_x+=1
            cgwindow,'dustemcgwin_dataset', st, dataset='QEXT', /nodata, /norm, position=np_qext, /addcmd, winid=winid_x, _extra=_extra & cmdind_x+=1
        
        endif else begin ;Qext data is present
                
            if  ~iswinext then begin
                cmdind_x = !dustemcgwin_ncmds.qext.pl
                ;refreshing the positive_only and negative_only plots if data is present in them
07372e26   Ilyes Choubani   Corrected huge pl...
858
                cgwindow,'dustemcgwin_dataset', st, dustem_qext,QEXT_spec,dataset='QEXT',/positive_only, nodata=0, /refresh ,position=p_qext, winid=winid_x,/replacecmd,cmdindex=cmdind_x, _extra=_extra
67bd858a   Ilyes Choubani   Replication of th...
859
                
07372e26   Ilyes Choubani   Corrected huge pl...
860
                cgwindow,'dustemcgwin_dataset', st, dustem_qext,QEXT_spec, dataset='QEXT',/negative_only, nodata=0, /refresh ,position=p_qext, winid=winid_x,/replacecmd,cmdindex=cmdind_x+2, _extra=_extra
67bd858a   Ilyes Choubani   Replication of th...
861
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                cmdind_x = !dustemcgwin_ncmds.qext.nrm
07372e26   Ilyes Choubani   Corrected huge pl...
863
                cgwindow,'dustemcgwin_dataset', st, dustem_qext,QEXT_spec, dataset='QEXT', /refresh, nodata=0, /norm,position=np_qext, winid=winid_x,/replacecmd,cmdindex=cmdind_x, _extra=_extra
67bd858a   Ilyes Choubani   Replication of th...
864
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            endif else begin
                
                ;Plotting of postive values if they exist (if hidden data is present it is plotted if not an empty plot is rendered)
                cgwindow,'dustemcgwin_dataset', st, dataset='QEXT', position=p_qext, /addcmd, winid=winid_x,/positive_only, _extra=_extra & cmdind_x+=1
                ;Refreshing the positive_only plot ONLY if there is data. If not do nothing
afde94a3   Ilyes Choubani   general update
870
                
07372e26   Ilyes Choubani   Corrected huge pl...
871
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                cgwindow,'dustemcgwin_dataset', st, dustem_qext,QEXT_spec, dataset='QEXT',/positive_only, /refresh ,position=p_qext, /addcmd, winid=winid_x, _extra=_extra & cmdind_x+=1
                
                !dustemcgwin_ncmds.qext.pl = cmdind_x
67bd858a   Ilyes Choubani   Replication of th...
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                cgwindow,'dustemcgwin_dataset', st, dataset='QEXT', position=p_qext, /addcmd, winid=winid_x,/negative_only, _extra=_extra & cmdind_x+=1
                ;Refreshing the negative_only plot ONLY if there is data. If not do nothing
07372e26   Ilyes Choubani   Corrected huge pl...
877
                cgwindow,'dustemcgwin_dataset', st, dustem_qext,QEXT_spec,dataset='QEXT',/negative_only, /refresh ,position=p_qext, /addcmd, winid=winid_x, _extra=_extra & cmdind_x+=1
67bd858a   Ilyes Choubani   Replication of th...
878
            
67bd858a   Ilyes Choubani   Replication of th...
879
                cgwindow,'dustemcgwin_dataset', st, dataset='QEXT',/norm, position=np_qext, /addcmd, winid=winid_x, _extra=_extra & cmdind_x+=1 ;I think nodata can also be uqsed too
07372e26   Ilyes Choubani   Corrected huge pl...
880
                cgwindow,'dustemcgwin_dataset', st, dustem_qext,QEXT_spec,dataset='QEXT', /norm, /refresh,position=np_qext, /addcmd, winid=winid_x, _extra=_extra & cmdind_x+=1
67bd858a   Ilyes Choubani   Replication of th...
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                !dustemcgwin_ncmds.qext.nrm = cmdind_x
                
        endelse       
      endelse
          ;stop        
        if ~test_uext then begin ;uext is not present
            
            cgwindow,'dustemcgwin_dataset', st, dataset='UEXT', /nodata, position=p_uext, /addcmd, winid=winid_x, _extra=_extra & cmdind_x+=1
            cgwindow,'dustemcgwin_dataset', st, dataset='UEXT', /nodata, /norm, position=np_uext, /addcmd, winid=winid_x, _extra=_extra & cmdind_x+=1
        
        endif else begin ;uext data is present
                
            if  ~iswinext then begin
                cmdind_x = !dustemcgwin_ncmds.uext.pl
                ;refreshing the positive_only and negative_only plots if data is present in them
f2caf3f1   Ilyes Choubani   Debugging some er...
896
                cgwindow,'dustemcgwin_dataset', st, dustem_uext,UEXT_spec, dataset='UEXT',/positive_only, nodata=0, /refresh ,position=p_uext, winid=winid_x,/replacecmd,cmdindex=cmdind_x, _extra=_extra
67bd858a   Ilyes Choubani   Replication of th...
897
                
f2caf3f1   Ilyes Choubani   Debugging some er...
898
                cgwindow,'dustemcgwin_dataset', st, dustem_uext,UEXT_spec, dataset='UEXT',/negative_only, nodata=0, /refresh ,position=p_uext, winid=winid_x,/replacecmd,cmdindex=cmdind_x+2, _extra=_extra
67bd858a   Ilyes Choubani   Replication of th...
899
                
afde94a3   Ilyes Choubani   general update
900
                cmdind_x = !dustemcgwin_ncmds.uext.nrm
07372e26   Ilyes Choubani   Corrected huge pl...
901
                cgwindow,'dustemcgwin_dataset', st, dustem_uext,UEXT_spec, dataset='UEXT', /refresh, nodata=0, /norm,position=np_uext, winid=winid_x,/replacecmd,cmdindex=cmdind_x, _extra=_extra
67bd858a   Ilyes Choubani   Replication of th...
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            endif else begin
            ;stop
                ;Plotting of postive values if they exist (if hidden data is present it is plotted if not an empty plot is rendred)
                cgwindow,'dustemcgwin_dataset', st, dataset='UEXT', position=p_uext, /addcmd, winid=winid_x,/positive_only, _extra=_extra & cmdind_x+=1
53548c91   Ilyes Choubani   Display of frozen...
907
                
67bd858a   Ilyes Choubani   Replication of th...
908
                ;Refreshing the positive_only plot ONLY if there is data. If not do nothing
07372e26   Ilyes Choubani   Corrected huge pl...
909
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                cgwindow,'dustemcgwin_dataset', st, dustem_uext,UEXT_spec, dataset='UEXT',/positive_only, /refresh ,position=p_uext, /addcmd, winid=winid_x, _extra=_extra & cmdind_x+=1
                
                !dustemcgwin_ncmds.uext.pl = cmdind_x
67bd858a   Ilyes Choubani   Replication of th...
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                cgwindow,'dustemcgwin_dataset', st, dataset='UEXT', position=p_uext, /addcmd, winid=winid_x,/negative_only, _extra=_extra & cmdind_x+=1
                ;Refreshing the negative_only plot ONLY if there is data. If not do nothing
07372e26   Ilyes Choubani   Corrected huge pl...
915
                cgwindow,'dustemcgwin_dataset', st, dustem_uext,UEXT_spec, dataset='UEXT',/negative_only, /refresh ,position=p_uext, /addcmd, winid=winid_x, _extra=_extra & cmdind_x+=1
67bd858a   Ilyes Choubani   Replication of th...
916
                
67bd858a   Ilyes Choubani   Replication of th...
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                cgwindow,'dustemcgwin_dataset', st, dataset='UEXT',/norm, position=np_uext, /addcmd, winid=winid_x, _extra=_extra & cmdind_x+=1 ;I think nodata can also be uused too
07372e26   Ilyes Choubani   Corrected huge pl...
919
                cgwindow,'dustemcgwin_dataset', st, dustem_uext,UEXT_spec, dataset='UEXT', /norm, /refresh,position=np_uext, /addcmd, winid=winid_x, _extra=_extra & cmdind_x+=1
67bd858a   Ilyes Choubani   Replication of th...
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                !dustemcgwin_ncmds.uext.nrm = cmdind_x
                
        endelse       
      endelse
      
      if ~test_psi_ext then begin ; psi_ext data is not present (For completeness) # This is only valid when !run_pol=1
          
07372e26   Ilyes Choubani   Corrected huge pl...
927
          cgwindow,'dustemcgwin_dataset', st, dataset='PSI_EXT', /nodata, position=p_psiext, /addcmd, winid=winid_x, _extra=_extra  & cmdind_x+=1
67bd858a   Ilyes Choubani   Replication of th...
928
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      endif else begin ;psi_ext exists

          if  ~iswinext then begin
              cmdind_x = !dustemcgwin_ncmds.psi_ext.pl
07372e26   Ilyes Choubani   Corrected huge pl...
933
              cgwindow,'dustemcgwin_dataset', st, dustem_psi_ext,PSIEXT_spec, dataset='PSI_EXT', /refresh ,position=p_psiext, winid=winid_x,/replacecmd,cmdindex=cmdind_x, _extra=_extra
67bd858a   Ilyes Choubani   Replication of th...
934
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          endif else begin
          ;stop
              cgwindow,'dustemcgwin_dataset', st, dataset='psi_ext', position=p_psiext, /addcmd, winid=winid_x, _extra=_extra & cmdind_x+=1
07372e26   Ilyes Choubani   Corrected huge pl...
938
              cgwindow,'dustemcgwin_dataset', st, dustem_psi_ext,PSIEXT_spec, dataset='psi_ext', /refresh ,position=p_psiext, /addcmd, winid=winid_x, _extra=_extra & cmdind_x+=1
67bd858a   Ilyes Choubani   Replication of th...
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              !dustemcgwin_ncmds.psi_ext.pl = cmdind_x

          endelse       
      endelse
        
      
      if ~test_polext then begin ; polext data is not present (For completeness) # This is only valid when !run_pol=1
          
          cgwindow,'dustemcgwin_dataset', st, dataset='polext', /nodata, position=p_pext, /addcmd, winid=winid_x, _extra=_extra & cmdind_x+=1
          cgwindow,'dustemcgwin_dataset', st, dataset='polext', /nodata, /norm, position=np_pext, /addcmd, winid=winid_x, _extra=_extra & cmdind_x+=1

      endif else begin ;polext exists

          if  ~iswinext then begin
              cmdind_x = !dustemcgwin_ncmds.polext.pl
              cgwindow,'dustemcgwin_dataset', st, dustem_polext,POLEXT_spec, dataset='polext', /refresh ,position=p_pext, winid=winid_x,/replacecmd,cmdindex=cmdind_x, _extra=_extra
              cmdind_x = !dustemcgwin_ncmds.polext.nrm
              cgwindow,'dustemcgwin_dataset', st, dustem_polext,POLEXT_spec, dataset='polext', /norm, /refresh,position=np_pext, winid=winid_x,/replacecmd,cmdindex=cmdind_x, _extra=_extra
          endif else begin
          ;stop
              cgwindow,'dustemcgwin_dataset', st, dataset='polext', position=p_pext, /addcmd, winid=winid_x, _extra=_extra  & cmdind_x+=1  
              cgwindow,'dustemcgwin_dataset', st, dustem_polext,POLEXT_spec, dataset='polext', /refresh ,position=p_pext, /addcmd, winid=winid_x, _extra=_extra & cmdind_x+=1
              !dustemcgwin_ncmds.polext.pl = cmdind_x
              cgwindow,'dustemcgwin_dataset', st, dataset='polext',/norm, position=np_pext, /addcmd, winid=winid_x, _extra=_extra & cmdind_x+=1 ;I think nodata can also be upolsed too
              cgwindow,'dustemcgwin_dataset', st, dustem_polext,POLEXT_spec, dataset='polext', /norm, /refresh,position=np_pext, /addcmd, winid=winid_x, _extra=_extra & cmdind_x+=1
              !dustemcgwin_ncmds.polext.nrm = cmdind_x
          endelse
      endelse      
      
      
      if ~test_fpolext then begin ; fpolext data is not present (For completeness) # This is only valid when !run_pol=1
          
          cgwindow,'dustemcgwin_dataset', st, dataset='fpolext', /nodata, position=p_spext, /addcmd, winid=winid_x, _extra=_extra  & cmdind_x+=1

      endif else begin ;fpolext exists

          if  ~iswinext then begin
              cmdind_x = !dustemcgwin_ncmds.fpolext.pl
              cgwindow,'dustemcgwin_dataset', st, dustem_fpolext,SPEXT_spec,EXT_spec, dataset='fpolext', /refresh ,position=p_spext, winid=winid_x,/replacecmd,cmdindex=cmdind_x, _extra=_extra
              
          endif else begin
07372e26   Ilyes Choubani   Corrected huge pl...
980
          
67bd858a   Ilyes Choubani   Replication of th...
981
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              cgwindow,'dustemcgwin_dataset', st, dataset='fpolext', position=p_spext, /addcmd, winid=winid_x, _extra=_extra & cmdind_x+=1
              cgwindow,'dustemcgwin_dataset', st, dustem_fpolext,SPEXT_spec,EXT_spec, dataset='fpolext', /refresh ,position=p_spext, /addcmd, winid=winid_x, _extra=_extra & cmdind_x+=1
              !dustemcgwin_ncmds.fpolext.pl = cmdind_x

          endelse       
      endelse  
      

    ENDIF
        
67bd858a   Ilyes Choubani   Replication of th...
991
    cgcontrol, winid_x, execute=1
d4f8829f   Ilyes Choubani   small cleaning
992
     
67bd858a   Ilyes Choubani   Replication of th...
993
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996
          
ENDIF 


5f04fa07   Ilyes Choubani   general update
997
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IF ~iswinprms THEN BEGIN;(NEXT RUNS)
    
    winid_prms = !dustemcgwin_id.prms
    cgcontrol, winid_prms, execute=0
    cgset, winid_prms
    cmdind_prms = !dustemcgwin_ncmds.prms.pl
    cgwindow,'dustemcgwin_dataset', st, res, errors, p_dim,dataset='PARAMETERS', /refresh, winid=winid_prms,/replacecmd,cmdindex=cmdind_prms, _extra=_extra
    cgcontrol, winid_prms ,execute=1 
ENDIF ELSE BEGIN ;(FIRST RUN)
dba085c0   Jean-Philippe Bernard   fixed windows pos...
1006
    cgwindow,wxpos=param_wxpos,wypos=param_wypos,wxsize=param_wxsize,wysize=param_wysize,wtitle='DUSTEMWRAP v2.0 (PARAMETERS)' ; keeping the same y dimension of the emission/extinction plot? 
b6aa1f62   Jean-Philippe Bernard   moved PARAMETERS ...
1007
;    cgwindow,wxsize=350,wysize=200,wtitle='DUSTEMWRAP v2.0 (PARAMETERS)' ; keeping the same y dimension of the emission/extinction plot? 
5f04fa07   Ilyes Choubani   general update
1008
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    winid_prms = cgquery(dimensions=dim_prms,/current) ;we don't need the dimension of the window so far/ I don't know why I needed it before
    cgcontrol, winid_prms, execute=0
    !dustemcgwin_id.prms = winid_prms
    cgwindow,'dustemcgwin_dataset', st, res, errors, p_dim,dataset='PARAMETERS', /addcmd , winid=winid_prms,_extra=_extra ;& cmdind_prms+=1
    cgwindow,'dustemcgwin_dataset', st, res, errors, p_dim,dataset='PARAMETERS', /addcmd, /refresh , winid=winid_prms, _extra=_extra & cmdind_prms+=1
    !dustemcgwin_ncmds.prms.pl = cmdind_prms
    cgcontrol, winid_prms ,execute=1        
ENDELSE 

2910e8ce   Ilyes Choubani   Draft version of ...
1017

67bd858a   Ilyes Choubani   Replication of th...
1018
;DISPLAY OF PLUGINS HAS A SMALL ISSUE
d4f8829f   Ilyes Choubani   small cleaning
1019
IF (tag_names(*!dustem_plugin))(0) NE 'NONE' THEN BEGIN  
67bd858a   Ilyes Choubani   Replication of th...
1020
1021
1022
1023
1024
1025
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1029

    IF ~iswinplgns THEN BEGIN;(NEXT RUNS)
        
        winid_plgns = !dustemcgwin_id.plgns
        cgcontrol, winid_plgns, execute=0
        cgset, winid_plgns
        cmdind_plgns = !dustemcgwin_ncmds.plgns.pl
        cgwindow,'dustemcgwin_dataset', st, res, errors, p_dim,dataset='PLUGINS', /refresh, winid=winid_plgns,/replacecmd,cmdindex=cmdind_plgns, _extra=_extra
        cgcontrol, winid_plgns ,execute=1 
    ENDIF ELSE BEGIN ;(FIRST RUN)
dba085c0   Jean-Philippe Bernard   fixed windows pos...
1030
        cgwindow,wxpos=plugin_wxpos,wypos=plugin_wypos,wxsize=plugin_wxsize,wysize=plugin_wysize,wtitle='DUSTEMWRAP v2.0 (PLUGINS)' ; keeping the same y dimension of the emission/extinction plot? 
b6aa1f62   Jean-Philippe Bernard   moved PARAMETERS ...
1031
        ;cgwindow,wxsize=350,wysize=200,wtitle='DUSTEMWRAP v2.0 (PLUGINS)' ; keeping the same y dimension of the emission/extinction plot? 
67bd858a   Ilyes Choubani   Replication of th...
1032
1033
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1035
1036
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1038
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1040
1041
        winid_plgns = cgquery(dimensions=dim_plgns,/current) ;we don't need the dimension of the window so far/ I don't know why I needed it before
        cgcontrol, winid_plgns, execute=0
        !dustemcgwin_id.plgns = winid_plgns
        cgwindow,'dustemcgwin_dataset', st, res, errors, p_dim,dataset='PLUGINS', /addcmd , winid=winid_plgns,_extra=_extra ;& cmdind_prms+=1
        cgwindow,'dustemcgwin_dataset', st, res, errors, p_dim,dataset='PLUGINS', /addcmd, /refresh , winid=winid_plgns, _extra=_extra & cmdind_plgns+=1
        !dustemcgwin_ncmds.plgns.pl = cmdind_plgns
        cgcontrol, winid_plgns ,execute=1        
    ENDELSE
     
ENDIF
2910e8ce   Ilyes Choubani   Draft version of ...
1042

2910e8ce   Ilyes Choubani   Draft version of ...
1043
END